Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3208 150 2e-31 seq236 143 3e-29 seq3256 132 5e-26 seq3304 114 1e-20 seq2275 96.9 3e-15 seq304 96.9 3e-15 seq1090 95.1 1e-14 >seq3208 Length=262556 Score = 150 bits (166), Expect = 2e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| ||||||| |||||||| |||||||||||||| || | || ||||| | || Sbjct 84079 AAGCACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCCATC 84138 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||| || |||||| | || || ||||| |||||||| || || ||||| || || Sbjct 84139 TTCAAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTATC 84198 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || ||||| || || || | | ||| | |||||||| | || | ||| Sbjct 84199 TTGGATCTTTTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCACTTCCAATGTAATGGT 84258 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | ||||||||| || |||||||| Sbjct 84259 CTTGCCAGTAAGAGTTTTTACAAAGATTTGCAT 84291 Score = 140 bits (154), Expect = 3e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| ||||| ||||||||||| | || ||||| | ||||| || || ||||| Sbjct 83867 GTTGATTCCTTTTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCTAGTTGTTTGCCT 83926 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | |||||||| |||||||| ||||| || |||||||| ||||| || |||||||| Sbjct 83927 GCAAAGATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCTTGAATCTTTTGCTTG 83986 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | | || || |||||||| | ||| | |||||||| |||||||| Sbjct 83987 ACGTTGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTGATAGTCTTGCCAGTCAAAGTC 84046 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 84047 TTGACGAAGATCTGCAT 84063 >seq236 Length=318481 Score = 143 bits (158), Expect = 3e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| || ||||| ||||||||||||||||| | || |||||| | ||| Sbjct 112580 AGAACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCCATCT 112639 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || || ||||||||| | ||||| || || ||||| |||||||| ||||| || ||| Sbjct 112640 TCCAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCT 112699 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || |||||||| ||| || | | ||| || |||||||| | || | ||| Sbjct 112700 TGAATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGTGATTGTC 112759 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || ||||| |||||||| Sbjct 112760 TTGCCTGTAAGCGTCTTGACGAAGATTTGCAT 112791 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||| |||||||| || | || ||||| | ||||| || || || ||| Sbjct 111783 GTGGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCCAGTTGTTTACCG 111842 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || || || || || ||||| || |||||||| ||||| || |||||||| Sbjct 111843 GCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCTTGAATCTTTTGCTTG 111902 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | | ||| || |||||||| | || | |||||||| |||| || Sbjct 111903 ACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTGCCAGTCAGGGTC 111962 Query 64427 TTTACGAAAATTTGCAT 64443 || || || |||||||| Sbjct 111963 TTGACAAAGATTTGCAT 111979 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||| |||||||| || | || ||||| | ||||| || || || || Sbjct 112011 GTGGATTCTTTTTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCTTCCAGTTGTTTACCA 112070 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || || || || || ||||| || |||||||| ||||| || |||||||| Sbjct 112071 GCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCTTGGATCTTTTGCTTG 112130 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 || || | | ||| || |||||||| | || | ||||||| Sbjct 112131 ACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATGGTCTTG 112178 >seq3256 Length=796958 Score = 132 bits (146), Expect = 5e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || ||||| |||||||||||||| || | | ||||| | ||| Sbjct 723385 AGGACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCT 723326 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||||||||||| | ||||| || |||||||| || || |||||||| || ||| Sbjct 723325 TCCAATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTTATCT 723266 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || |||||||| || || | | || | || ||||| | ||| | |||| Sbjct 723265 TGAATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACTTCGAGAGTGATGGTC 723206 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAAT 64449 ||||| ||||| || || ||||| |||||||| || || Sbjct 723205 TTGCCAGTCAAGGTCTTGACGAAGATTTGCATGTTGAT 723168 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||||||||| |||||||| || | | || || | ||| Sbjct 724525 AGGACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAAAGTACGACCATCT 724466 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| |||||| | || | || |||||||| || || || ||||| || ||| Sbjct 724465 TCGAGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGGGATACCTTCCTTGTCT 724406 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || |||||||| || || | | ||| || |||||||| | ||| | ||| Sbjct 724405 TGGATCTTTTGCTTGACGTTATCGATAGAGTCAGAGGATTCCACTTCCAAAGTAATAGTC 724346 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| |||| || || || || |||||||| Sbjct 724345 TTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 724314 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||||||||| |||||||| || | || || || | ||||| | || Sbjct 724288 TGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCCATCTTCCAATTGT 724229 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | || | || || ||||| || || || ||||| || ||||| || ||| Sbjct 724228 TTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTGGATCTTT 724169 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||||| ||| || | | || || |||||||| | ||| | ||||| || ||| Sbjct 724168 TGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGATTGTCTTACCAGTC 724109 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 || || || || || |||||||| Sbjct 724108 AAGGTCTTCACAAAGATTTGCAT 724086 >seq3304 Length=726533 Score = 114 bits (126), Expect = 1e-20 Identities = 546/858 (64%), Gaps = 21/858 (2%) Strand=Plus/Plus Query 154595 GTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCACAAATTACT 154654 ||| || ||||| ||||| |||| || ||||| || || |||| ||||| || || Sbjct 454657 GTTACACACGGCGATTTCGTCAGGGCTGGAGTATTCGACGATCTCTGTGCACAGGTTGCT 454716 Query 154655 GCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTGTACAA 154714 | | | |||||||| ||||| | || |||||||| ||||| ||||| |||||||| Sbjct 454717 GGAGTGGATGGTGCCTAGGTTCTGTTGGTTCGATTTACGATTGCAGGCGTCCTTGTACAA 454776 Query 154715 AATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAA-ACAGACTTCGCG 154773 ||| | || | || |||||| ||| | ||| ||||||| ||| | || || | | Sbjct 454777 CATGAATGGATTCCCAGTTTCCGTTTGCGCTTCCATAATTGC-CGACCAAAGCTTTTGAG 454835 Query 154774 CCTCAAC---TTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTTTCAA 154830 ||| | ||| | || | ||| || ||||| ||||| || || ||| Sbjct 454836 CCTTGAGAGTTTGCCGAGCA---CGACCTTGTTGTTCATACTGTTCATAAAGGGAGACAA 454892 Query 154831 ACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGACCACA 154890 | | | | || || ||| || ||| ||| || || | ||| ||||| Sbjct 454893 AGGCATCGCCCCAGACATCTTGCAAGCCAGGAGCTTCGTCAGGGCAAAACAAAGACCAGT 454952 Query 154891 TTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAAT 154950 | || | || || | |||||| | ||| || | ||||| ||| || |||| || Sbjct 454953 CGCCATTGGCCTCGACACGCTCCATAAAGAGATCAGGAATCCACAGAGCATAAAACAGAT 455012 Query 154951 CACGCGCCTTTTTGTCTTCAGCGCCCA---TGTTTCGCTTTAAATTCAAAAAATCATATA 155007 |||| ||| | || || ||||| | || ||| | || || || | | Sbjct 455013 CACGAGCCCGGCTTTCATCTTTGCCCACATTCTTGCGC---AGATCCAGGAACGAGAAGA 455069 Query 155008 TGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTTT---CCTCCTT 155064 ||| || ||||| || || | || | || | ||||| ||||| || |||| Sbjct 455070 CGTCAGCATGCCAAGGTTCGAGGTAGATTGCAAAGGCGCCAGGACGTTTGTTGCCACCTT 455129 Query 155065 GATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCG 155124 ||||||| | || || || ||| | || || | || || | ||| | | Sbjct 455130 GATCCACATAGCGAGCAGTGTTGTTGAAGACTCGAAGCATAGGAAGGAGACCGTTTGAGT 455189 Query 155125 TGCCGTTGGTGCCACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCA 155184 ||||||||||||| || | |||| ||| || || || | | | || | Sbjct 455190 GGCCGTTGGTGCCAGCAATGTAGGAGCCGGTAGCGCGAATGTTGTGGATGCTGAGCCCGA 455249 Query 155185 AACCTCC-GCCGTATTT-AGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTT 155242 ||| || ||||| || |||| | ||| ||| || | | ||| ||||| || |||| Sbjct 455250 TACCGCCAGCCGTCTTGGAGATCTGTGCACACTGTTTG--AGAGTATCGTAAATCCCTTC 455307 Query 155243 GATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGGGCAGCC 155302 ||| |||||||||| ||||| ||| || || || || | ||| ||| | || ||| Sbjct 455308 GATCGAATCTTCTTTCATCGTCAGCAAAAAGCAGGAGGACAGTTGCGGTCGGGGAGTGCC 455367 Query 155303 GGCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTAAGTTGTAAGT 155362 ||| ||||| || ||||| ||||| ||||| || | | | | |||||| || Sbjct 455368 GGCGCTGAATAAGGTGGGACTGGCGTGGGTAAAGTACTTTTCAGACATGAGGTTGTAGGT 455427 Query 155363 TTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTG 155422 ||||||||| ||||| || ||| | || || || || | |||||| ||||| | | || Sbjct 455428 TTCGATGGCAGCGTCGATATCATGGCCATGGATCCCCACCGCCACACGCATGATTAGATG 455487 Query 155423 TTGAATGCGCTCCGCAAC 155440 |||| || ||||| || Sbjct 455488 TTGAGGTCGTTCCGCCAC 455505 >seq2275 Length=1761326 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| |||||||||||||| || | | || || ||||||| || ||| Sbjct 759229 TGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCGTCTTCGAGTTGC 759288 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||| ||| | || || || ||||| || ||||| || ||||| || ||||| || ||| Sbjct 759289 TTGCCAGCAAAGATAAGACGTTGCTGATCAGGAGGGATACCTTCCTTGTCTTGGATCTTT 759348 Query 64361 TGCTTTAC 64368 ||||| || Sbjct 759349 TGCTTGAC 759356 >seq304 Length=62727 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| ||||| |||||||| || | | || || | ||||| || ||||||||| Sbjct 38853 GTGGATTCCTTTTGGATGTTGTAGTCGGACAACGTACGGCCATCTTCGAGTTGCTTGCCG 38912 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || || ||||| || |||||||| ||||| || ||||| || |||||||| Sbjct 38913 GCAAAGATAAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTTTGCTTG 38972 Query 64367 ACA 64369 ||| Sbjct 38973 ACA 38975 >seq1090 Length=283134 Score = 95.1 bits (104), Expect = 1e-14 Identities = 174/255 (68%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 155198 TTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTT 155257 ||| || |||||||||||| || || |||||||| || |||| ||| |||||| || Sbjct 229140 TTTTGAGATTTGCGCACAGACCTTCAGTGTTTCGTAGATGCCTTCAATGGAGTCTTCCTT 229081 Query 155258 CAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAATGT 155317 || || | |||||| || || || | ||||| |||| ||||| ||||| || Sbjct 229080 CATGGTGAGCAAGAAGCAAGAGGAGAGCTGAGGACGAGGAGTACCGGCATTGAATAAGGT 229021 Query 155318 AGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTC 155377 ||||| ||||| || || || | | | | ||||| |||||||| || | ||| Sbjct 229020 TGGACTGGCGTGGGTGAAGTACTTTTCCGACATGAGATTGTAGGTTTCGATAGCCGAGTC 228961 Query 155378 AATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGCGCTCCGC 155437 || || || || ||||| | ||||| ||||| | | |||||| || ||||| Sbjct 228960 GATATCTTCGCCATGAATACCCACGGCCACACGCATGATAAGATGTTGAGGACGTTCCGC 228901 Query 155438 AACGCGGCCGTTGAT 155452 || ||||||||| Sbjct 228900 CACTTTGCCGTTGAT 228886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499611461200720