Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3304 188 7e-43 seq1090 152 5e-32 >seq3304 Length=726533 Score = 188 bits (208), Expect = 7e-43 Identities = 1062/1675 (63%), Gaps = 53/1675 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| || |||||| ||||||||| | || || |||| | | Sbjct 455565 TACAACTACTTTGGCTTCAAGACCCTGGAGCGCTCGTACCTCTTGAAAATCAATGGAAAG 455506 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | || ||||| || || || | ||||| || || | ||||| || ||||| || Sbjct 455505 GTGGCGGAACGACCTCAACATCTAATCATGCGTGTGGCGGTGGGGATCCATGGCCATGAT 455446 Query 93838 AT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCAC 93896 || | || || | | | || |||| || ||| | |||| |||| Sbjct 455445 ATCGACGC-TGCCATCGAAACCTACAACCTCATGTCTGAAAAGTACTTTACCCACGCCAG 455387 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 || ||| | |||| ||| || || || || || |||| || || || || |||| Sbjct 455386 TCCCACCTTATTCAGCGCCGGCACTCCCCGACCGCAACTGTCCTCCTGCTTTTTGCTGAC 455327 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 || || | || || ||| || |||| ||| | ||||| | ||||| ||||| Sbjct 455326 GATGAAAGAAGATTCGATCGAAGGGATTTACGATACTCTCAAACAGTGTGCACAGATCTC 455267 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076 || || || || |||||| |||| ||||| || | || || | || |||||||| Sbjct 455266 CAAGACGGCTGGCGGTATCGGGCTCAGCATCCACAACATTCGCGCTACCGGCTCCTACAT 455207 Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 || ||||| ||| ||| ||||| ||| | |||||||| || |||||||||||| | Sbjct 455206 TGCTGGCACCAACGGCCACTCAAACGGTCTCCTTCCTATGCTTCGAGTCTTCAACAACAC 455147 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || ||||| ||||| || ||||| | | || | || || |||| ||||| Sbjct 455146 TGCTCGCTATGTGGATCAAGGTGGCAACAAACGTCCTGGCGCCTTTGCAATCTACCTCGA 455087 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 || ||||| || ||||| | ||| | || ||||| ||||| ||||| ||| Sbjct 455086 ACCTTGGCATGCTGACGTCTTCTCGTTCCTGGATCTGCGCAAGAATGTGGGCAAAGAT-- 455029 Query 94257 GGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | |||| | || || || || ||||| ||| | || || || |||||| | || Sbjct 455028 -GAAAGCCGGGCTCGTGATCTGTTTTATGCTCTGTGGATTCCTGATCTCTTTATGGAGCG 454970 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 |||||| || || |||| | | ||||| || | ||| ||| || || || Sbjct 454969 TGTCGAGGCCAATGGCGACTGGTCTTTGTTTTGCCCTGACGAAGCTCCTGGCTTGCAAGA 454910 Query 94374 CGTTTGTG--GATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 || || | ||| || |||| | | |||| | || ||| || || || Sbjct 454909 TGTCTGGGGCGAT-GC-CTTTGTCTCCCTTTATGAACAGTATGAACAACAAGGTCGTGCT 454852 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAG--ATCGTGGACGTACAGGTGGAGA 94489 || | | | | ||| ||||| ||| || | || |||| | || ||| | Sbjct 454851 CGGCAAACTCTCAAGGCTCAAAAGCTTTGG--TCGGCAATTATGGAAGCGCAAACGGAAA 454794 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || | || | ||| |||| ||||||| | ||| || || ||||| ||| ||| Sbjct 454793 CTGGGAATCCATTCATGTTGTACAAGGACGCCTGCAATCGTAAATCGAACCAACAGAACC 454734 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTC--TCCGGA 94607 | || ||| | | || |||||||| ||||| ||||| ||||| | || || Sbjct 454733 TAGGCACCATCCACTCCAGCAACCTGTGCACAGAGATCGTCGA--ATACTCCAGCCCTGA 454676 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA 94667 ||| || || ||||||||||| | | |||| ||| || | || || || || Sbjct 454675 CGAAATCGCCGTGTGTAACCTCGCCAGCATCGCCCTCCCCTCCTTTGTCGTTGA--CCGC 454618 Query 94668 CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT--- 94724 ||| ||| ||| | | | || | || || | | |||| |||| Sbjct 454617 CACACATACGACTTTG-CCCACTTGCACAAG---GTCACC--------AAGG-TGGTTGC 454571 Query 94725 CTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTC 94784 | |||||| |||| | | ||||||| || | ||||| || || || ||| || Sbjct 454570 CAAGAACCTCAACAAGATCATCGACATCAATTATTACCCTGTGGTCGAAGCCGAGCGGTC 454511 Query 94785 AAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGAT 94844 ||| ||||| ||||||||||| || |||||||| | || || || | || | Sbjct 454510 CAACAAACGTCATCGTCCCATCGGCATTGGTGTCCAGGGCCTGGCCGATGCCTTTTTGCT 454451 Query 94845 GATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAG 94904 |||||| |||| || || | ||| || | | | || | | || || |||| Sbjct 454450 GATGCGCTACCCCTTTGAATCCGCCGAGGCCAAGCGACTCAACCAGCAAATCTTTGAAAC 454391 Query 94905 CATTTATTACGGGGCCATGAAACAATC-CGTCCACTTGGCCAG-ATCGGACGGCGGGCCA 94962 ||| || | | ||| || | || || ||| | |||| | | |||| | Sbjct 454390 CATCTACCATGCGGCATTGGAGGCGTCGTGTGAACTGGCCCAGCAAC--ACGGTG---TC 454336 Query 94963 CACGAATCGTTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGG 95020 ||||| | || || || |||| || | | ||||| | || | |||| | |||| Sbjct 454335 TACGAAAC-TTACGAGGGCTGCCC-TGTATCCAAGGGCCAACTGCAATACGACATGTGGG 454278 Query 95021 GTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACG 95080 | || | || | | ||| | |||||| |||| || || || ||| |||| Sbjct 454277 GCGTCACACCGACCGATCTATGGGACTGGACGACTCTCAAAGCCGACATTGCCAAGCACG 454218 Query 95081 GTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTG 95140 | || ||| |||| || || |||||||||||||| |||||||| | || ||||| | Sbjct 454217 GCGTCCGCAACTCGCTCCTGGTAGCCCCCATGCCCACCGCCTCCACATCACAAATCCTCG 454158 Query 95141 GCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCG 95200 || |||||| | |||||||||| |||||||| | |||| | | || ||||| |||| Sbjct 454157 GCTTCAACGAATGCTTCGAACCCTATACCTCCAATCTCTACACCCGCCGTGTGCTTGCCG 454098 Query 95201 GGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGTG 95258 | ||||||| ||| ||||| || || |||| || ||| || ||| | || Sbjct 454097 GTGAATTCCAAGTCGTCAACCCATGGCTGCTCAAGGACTTG--GTCGAGCTCGGTCTCTG 454040 Query 95259 GGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCA 95318 | || | ||||||||| | | | || ||||| || || |||||||| Sbjct 454039 GAACGAAGACATCAAGAACCGCATCATGGCTGACAGTGGCTCGGTGCAACACATCCCGTC 453980 Query 95319 AATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | | || || ||||||| | |||||||| |||||||| ||| |||| ||| Sbjct 453979 ACTCCCCGATACTCTCAAGGCCATGTACAAGACGGTGTGGGAAATCTCGCAACGC 453925 >seq1090 Length=283134 Score = 152 bits (168), Expect = 5e-32 Identities = 293/431 (68%), Gaps = 6/431 (1%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||| || ||| | ||||| || || || || || ||| | || || || ||| || Sbjct 229012 GCCAGTCCAACCTTATTCAATGCCGGTACTCCTCGTCCTCAGCTCTCCTCTTGCTTCTTG 229071 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | || | |||| |||||||| || || | ||| | || |||| ||||||| Sbjct 229072 CTCACCATGAAGGAAGACTCCATTGAAGGCATCTACGAAACACTGAAGGTCTGTGCGCAA 229131 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||||||| ||| || || |||||| ||| ||||| || | ||||||| || ||| Sbjct 229132 ATCTCAAAAACCGCAGGCGGGATCGGGCTCAACATCCACAACATCCGTGCCACTGGCTCC 229191 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||||| || ||| |||||| || | | ||||||||||| ||||||||| Sbjct 229192 TACATTGCTGGTACAAACGGCTACTCCAATGGTATTCTTCCTATGCTCCGTGTCTTCAAC 229251 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || || || ||||| || ||||| | | ||| ||||||| | ||| Sbjct 229252 AACACTGCTCGTTATGTGGATCAAGGTGGCAACAAACGACCTGGTGCTTTCGCCATGTAT 229311 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || || || ||||| || || || | || | || || || ||||| |||||| Sbjct 229312 CTTGAACCTTGGCATGCTGATGTCTTCACCTTTTTGGATCTCCGCAAGAATGTCGGCAAA 229371 Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || | |||| | || |||||||| ||||||||| | || || || || ||| Sbjct 229372 GA---CGAAATCCGGGCTCGTGATCTCTTCTATGCTCTCTGGATCCCTGATCTCTTCATG 229428 Query 94309 AAACGCGTCGA 94319 || || || || Sbjct 229429 AAGCGTGTGGA 229439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494690189594480