Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3256 113 3e-20 seq3208 95.1 9e-15 seq236 89.7 4e-13 >seq3256 Length=796958 Score = 113 bits (124), Expect = 3e-20 Identities = 154/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| |||||||| ||||| || ||||| |||||||| || ||| | | | ||||| Sbjct 723611 AACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTC 723552 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC--A 15084 | ||||||||||||| | ||||| || |||||||| || || ||||||||||| Sbjct 723551 CAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTG 723492 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 | |||||| || || | || |||| ||| ||| || || ||||||||||| Sbjct 723491 GATCTTTTGC--TTGACGTTATCGATAGAGTCGGAGGATTCCACTTCCAAGGTAATGGTC 723434 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || |||| || || ||||| ||||||||| Sbjct 723433 TTGCCAGTCAAGGTCTTGACAAAGATTTGCATA 723401 Score = 104 bits (114), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || ||||| ||||| |||||||| |||||||| || ||| | | | ||||| Sbjct 724295 AACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCCATCTTC 724236 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC--A 15084 |||||||| |||||| | |||||||| |||||||| || || ||||||||||| Sbjct 724235 CAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTG 724176 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 | |||||| || ||| | || |||| || ||| || || | || || || Sbjct 724175 GATCTTTTGC--TTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGATTGTC 724118 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| |||| || || ||||| ||||||||| Sbjct 724117 TTACCAGTCAAGGTCTTCACAAAGATTTGCATA 724085 Score = 100 bits (110), Expect = 2e-16 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| ||||| || ||||| |||||||| || ||| | | | ||||| | |||| Sbjct 724060 TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTCCAGTTGT 724001 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC--ACAAATTT 15091 ||||||||| | ||||| || |||||||| || |||||||||||||| | ||| Sbjct 724000 TTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTGGATCTTT 723941 Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 ||| || || | || |||| || ||| || || | ||| || |||||||| | Sbjct 723940 TGC--TTCACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTTTTACCAG 723883 Query 15152 TCAGAGTTTTTACAAAAATTTGCATA 15177 |||| || || || || ||||||||| Sbjct 723882 TCAGGGTCTTGACGAAGATTTGCATA 723857 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || ||||| ||||| || ||||| |||||||| || |||| | | | ||||| Sbjct 723839 AACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTC 723780 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC--A 15084 | |||||| |||||| | |||||||| || || || || || ||||||||||| Sbjct 723779 CAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGGGGGATACCTTCCTTGTCTTG 723720 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 | |||||| || ||| | || |||| || ||| || || | || || || Sbjct 723719 GATCTTTTGC--TTCACATTGTCGATAGAGTCAGAGGATTCCACTTCCAGAGTGATTGTC 723662 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || |||| ||| || ||||| ||||||||| Sbjct 723661 TTGCCAGTCAAAGTCTTGACAAAGATTTGCATA 723629 >seq3208 Length=262556 Score = 95.1 bits (104), Expect = 9e-15 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| || || || ||||| |||||||| ||| ||| | | | ||||| | || Sbjct 84088 ATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTG 84147 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||| || || | || | |||||||||||| ||| || |||||||| || || || Sbjct 84148 TTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTATCTTGGATCTT 84207 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 ||| || | || || | || | ||| || || || |||||||| || || || Sbjct 84208 TTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCACTTCCAATGTAATGGTCTTGCCAGT 84267 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 |||||||||||||| ||||||||| Sbjct 84268 AAGAGTTTTTACAAAGATTTGCATA 84292 >seq236 Length=318481 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| |||||||| || || || ||||| ||||||||||| ||| | | | ||||| Sbjct 112582 AACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTC 112641 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | ||||||||| || | || | ||| |||||||| ||||| ||||||||||| Sbjct 112642 CAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG 112701 Query 15087 AA--TTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 || |||||| || ||| | || || | || ||| || || | ||| || || Sbjct 112702 AATCTTTTGC--TTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGTGATTGTC 112759 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || || || || || |||||||| Sbjct 112760 TTGCCTGTAAGCGTCTTGACGAAGATTTGCAT 112791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357368749193330