Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3256 125 6e-24 seq3208 122 8e-23 seq3304 116 3e-21 seq236 104 2e-17 seq197 84.2 2e-11 >seq3256 Length=796958 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || ||||||||||| || || || || Sbjct 723403 ATACCACCACGGAGACGGAGGACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCA 723344 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || ||| |||||||| || || ||| | || | |||||||||||| || Sbjct 723343 GAAAGAGTGCGGCCATCTTCCAATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGG 723284 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| ||||||||||| ||||| |||| || | || | || ||||||||| || Sbjct 723283 GGGATTCCTTCCTTATCTTGAATCTTTTGCTTGA-CGTTGTCGATGGAGTCGGAAGATTC 723225 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||||| | || ||||| || | || || || || |||||||| Sbjct 723224 AACTTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 723174 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || | ||| || || |||||||||||||| || || || Sbjct 723631 ATACCACCACGGAGACGGAGAACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 723572 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | ||| |||| |||||| || ||| | ||||| ||||| ||||| || Sbjct 723571 GAGAGCGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGG 723512 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| || ||||| || ||||| |||| || | || | | |||||| || || Sbjct 723511 GGGATACCTTCCTTGTCTTGGATCTTTTGCTTGA-CGTTATCGATAGAGTCGGAGGATTC 723453 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | |||| || ||||| || | || || ||||| |||||||| Sbjct 723452 CACTTCCAAGGTAATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 723402 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || || || || |||||||||||||| || || || Sbjct 724087 ATACCACCACGGAGACGGAGAACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 724028 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | ||| |||| |||||| || ||| | ||||| ||||| ||||| || Sbjct 724027 GAGAGCGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGG 723968 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| || ||||| || ||||| || | || | || | | ||| || || || Sbjct 723967 GGGATTCCTTCCTTGTCTTGGATCTTTTGCTTCA-CGTTGTCGATAGAGTCAGAGGATTC 723909 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | ||||| || || || || || || || |||||||| Sbjct 723908 CACTTCAAGGGTGATTGTTTTACCAGTCAGGGTCTTGACGAAGATTTGCAT 723858 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || |||||||||||||| || || || || || ||| |||| |||| Sbjct 723832 TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCCAGTTGT 723773 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | ||||| |||||||| || || || || ||||| || ||||| || ||| Sbjct 723772 TTACCAGCGAAGATCAAACGTTGCTGATCAGGGGGGATACCTTCCTTGTCTTGGATCTTT 723713 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || || | || | | ||| || || || ||||| ||||| | || ||||| || Sbjct 723712 TGCTTCACATTGTCGATAGAGTCAGAGGATTCCACTTCCAGAGTGATTGTCTTGCCAGTC 723653 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | ||| || ||||| |||||||| Sbjct 723652 AAAGTCTTGACAAAGATTTGCAT 723630 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | || ||||| || || ||||| |||||||| || || || Sbjct 724540 CCACCACGGAGACGTAGGACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 724481 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | ||| || | || || || || | ||||| ||||||||||| || || Sbjct 724480 AAAGTACGACCATCTTCGAGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGGG 724421 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || ||||| || ||||| || ||||| |||| || | || | | ||| || || || || Sbjct 724420 ATACCTTCCTTGTCTTGGATCTTTTGCTTGA-CGTTATCGATAGAGTCAGAGGATTCCAC 724362 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| | ||||| || ||||| || || || || ||||| |||||||| Sbjct 724361 TTCCAAAGTAATAGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 724314 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || ||||| |||||||| || || || || || ||| ||||||||| Sbjct 724288 TGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCCATCTTCCAATTGT 724229 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | ||||| ||||| ||||| || || || ||||| || ||||| || ||| Sbjct 724228 TTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTGGATCTTT 724169 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || || | || | | ||| || || || ||||| ||||| | || || || || Sbjct 724168 TGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGATTGTCTTACCAGTC 724109 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | || || ||||| |||||||| Sbjct 724108 AAGGTCTTCACAAAGATTTGCAT 724086 >seq3208 Length=262556 Score = 122 bits (134), Expect = 8e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || ||||||||||||||||| || ||||| || || | ||| || | |||| Sbjct 83861 TGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCTAGTTGT 83920 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || ||||| | || | ||||||||||| || || |||||||||||||||||||| ||| Sbjct 83921 TTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCTTGAATCTTT 83980 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || |||| || | || | | ||| || || || ||||| ||||| | || ||||| || Sbjct 83981 TGCTTGA-CGTTGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTGATAGTCTTGCCAGT 84039 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | ||| || || || || ||||| Sbjct 84040 CAAAGTCTTGACGAAGATCTGCAT 84063 Score = 122 bits (134), Expect = 8e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| ||||| || || ||||||||||| || || || ||| || || ||| || Sbjct 84082 CACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTC 84141 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | ||||| || || | || | || || ||||| || || |||||||| |||||||| Sbjct 84142 AAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTATCTTG 84201 Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 || |||||||||| || | || | || ||| ||||| || ||||| | |||| || | Sbjct 84202 GATCTTTTGTTTGA-CGTTGTCGATGGAGTCAGAAGATTCCACTTCCAATGTAATGGTCT 84260 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||| || |||||||||||||| |||||||| Sbjct 84261 TGCCAGTAAGAGTTTTTACAAAGATTTGCAT 84291 >seq3304 Length=726533 Score = 116 bits (128), Expect = 3e-21 Identities = 480/745 (64%), Gaps = 18/745 (2%) Strand=Plus/Minus Query 123931 TGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTA 123990 ||||||| || ||| | || ||||| || | ||| || ||| || ||| || | Sbjct 454469 TGGCCGATGCCTTTTTGCTGATGCGCTACCCCTTTGAATCCGCCGAGGCCAAGCGACTCA 454410 Query 123991 ATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGA 124050 | |||||| ||||| || || | | || ||||||||| || ||||| || Sbjct 454409 ACCAGCAAATCTTTGAAACCATCTACCATGCGGCATTGGAGGCGTCGTGTGAACTGGCCC 454350 Query 124051 AAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTT-TGCAG 124109 | ||||| | ||||||| ||||| |||| |||| | | || ||| |||| Sbjct 454349 AGCAACACGGTGTCTACGAAACTTACGAGGGCTGCCCTGT-ATCCAAGGGCCAACTGCAA 454291 Query 124110 TACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGA-GCGTTTTAAAACAACG 124168 |||||||||||| | |||||||| || | |||||||||| | | | ||| | || Sbjct 454290 TACGACATGTGGGGCGTCACACCGACCGATCTATGGGACTGGACGACTCTCAAAGC--CG 454233 Query 124169 -CATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCA 124227 ||| | | |||||| | || |||||||| |||| || |||||| || || ||| Sbjct 454232 ACATTGCCAAGCACGGCGTCCGCAACTCGCTCCTGGTAGCCCCCATGCCCACCGCCTCCA 454173 Query 124228 CTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGC 124287 | | ||||| | || |||||||| |||||| || | || |||| | ||| | Sbjct 454172 CATCACAAATCCTCGGCTTCAACGAATGCTTCGAACCCTATACCTCCAATCTCTACACCC 454113 Query 124288 GACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCAT--TTGGTGGACGACTTGGT 124345 | || ||| | ||||| || || ||||| | || | ||| || | | |||||||| Sbjct 454112 GCCGTGTGCTTGCCGGTGAATTCCAAGTCGTCAACC--CATGGCTGCTCAAGGACTTGGT 454055 Query 124346 GGCGTTAAATTTGTACGATGAAAACATGCGCAACGAAATTATTGCGGCCGGTGGCAGCGT 124405 | | | | | | | ||| |||| ||| || || || | | ||||| || Sbjct 454054 CGAGCTCGGTCTCTGGAACGAAGACATCAAGAACCGCATCATGGCTGACAGTGGCTCGGT 453995 Query 124406 GCAGCGCATCGCTTCGATTCCGGA-ACACGTCAAGCAACTGTACAAAACCGTGTGGGAAA 124464 ||| | |||| | || | || || || | ||||| ||||||| || |||||||||| Sbjct 453994 GCAACACATCCCGTCACTCCCCGATACTC-TCAAGGCCATGTACAAGACGGTGTGGGAAA 453936 Query 124465 T---GAAAAATAAACGATTAATTGAAATGGCCGTCGACCGAGGCGCGTACACGGATCAAA 124521 | | || | | | ||||| ||||| | ||| || || || | | || |||| Sbjct 453935 TCTCGCAACGCACTC---TGATTGATATGGCGGCCGATCGCGGGGCTTTTATTGACCAAA 453879 Query 124522 GTCAATCTTTTAACGTGTTTGTAGCGGAACCCACCTACGCCCGCATGACCAGCATACACA 124581 ||||| | || || ||| | | | ||||||| | |||| ||||| ||| Sbjct 453878 GTCAAAGCCTGAATGTCTTTATCGGTGTCCCCACCTTTGGAAAGTTGACAAGCATGCACT 453819 Query 124582 TGCACGCGTGGAGCAGCGGACTCAAAACGGGCATGTATTACTTAAGAACCAAACCGGCGG 124641 | | | |||| | || |||||||| ||||||||||| | | || || || | Sbjct 453818 TTTATGGCTGGAAAAAGGGGCTCAAAACTGGCATGTATTATCTGCGCACACGGCCTGCCG 453759 Query 124642 CCGATGCCATTCAATTTACCGTCGA 124666 ||| || || | ||||||||||| Sbjct 453758 TCGACGCTATCAAGTTTACCGTCGA 453734 >seq236 Length=318481 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 ||||| || ||||| |||||||| || || || || || ||| |||| |||| Sbjct 111777 TGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCCAGTTGT 111836 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | || | ||||| || || || || |||||||||||||||||||| ||| Sbjct 111837 TTACCGGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCTTGAATCTTT 111896 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || |||| || | || | | ||| || || || ||||| || || | || ||||| || Sbjct 111897 TGCTTGA-CGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTGCCAGT 111955 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||| |||||||| Sbjct 111956 CAGGGTCTTGACAAAGATTTGCAT 111979 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || | ||| || || ||||||||||| || || ||||| Sbjct 112562 ATACCACCACGGAGACGGAGAACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCA 112621 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| |||| |||||| || || | || | ||||| ||||| || Sbjct 112622 GAGAGGGTGCGGCCATCTTCCAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGA 112681 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| || |||||||| ||||| |||| || | || ||| || || || Sbjct 112682 GGAATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCC 112741 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | || ||||| || || || || || || |||||||| Sbjct 112742 ACTTCAAGGGTGATTGTCTTGCCTGTAAGCGTCTTGACGAAGATTTGCAT 112791 >seq197 Length=169696 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || | ||| || || |||||||||||||| || || || Sbjct 118665 ATACCACCACGGAGACGAAGGACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAGTCA 118606 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| |||||||| ||||| || | ||||| |||||||| || || Sbjct 118605 GAGAGAGTGCGGCCATCTTCCAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCAGGG 118546 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGA 45264 || || ||||| |||||||| || ||||| |||| Sbjct 118545 GGGATACCTTCCTTATCTTGGATCTTTTGCTTGA 118512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451973040086480