Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1090 264 1e-65 seq319 89.7 6e-13 seq3304 87.8 2e-12 seq2275 84.2 3e-11 >seq1090 Length=283134 Score = 264 bits (292), Expect = 1e-65 Identities = 1110/1715 (65%), Gaps = 48/1715 (3%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||| ||||| || ||||||||||||| ||||| |||| | ||||| || | Sbjct 230630 CGGAGGTAATACATGCCGGTCTTGAGCCCCTTTTTCCATCCATAAAAGTGCATACTGGTC 230571 Query 115618 AACTTGG-AGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 115676 | |||| | ||| |||| | ||||||| |||| ||||| ||| ||||| || Sbjct 230570 AGCTTGCCAAAGTTAGGGACAC-CGATGAAGATATTCAAGCTTTGACTTTGGTCGATAAA 230512 Query 115677 GCGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTTC 115735 | |||||||| || ||||||||||| | | | | | ||||||||| || || Sbjct 230511 GGCCCCCCGATCAGCGGCCATATCAATGAGTGTGCGTTG-CGAGATTTCCCATACCGTCT 230453 Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCT 115795 |||| | || | || ||| ||||| | | ||| || || | ||||||| || | Sbjct 230452 TGTACATTGCTTTGAGATGATCCGGGATGTTCTGGATGTTCTGTACCGAGCCAC-TGTCA 230394 Query 115796 TGACC--ATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCAC 115853 ||| ||| | | ||| || || | ||||| || | ||| || || Sbjct 230393 -GACATGATGCGGTTCTTGATGTCTTCGTTCCAGATGCCGAG-TTC--GACCAAGTCTTT 230338 Query 115854 GAGGTGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910 |||| || | ||||| | || ||||| |||||| || | |||| ||| Sbjct 230337 GAGGAGCCAAGGGTTGACGATTTGGAATTCACCAGCGAGGACACGACGGGTGTAGAGGTT 230278 Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970 || ||||| || || ||||| || ||| || | |||||| | ||||| |||||||| Sbjct 230277 GGAGGTGTAAGGTTCGAAGCATTCGTTGAAGCCGAGGATTTGCGAGGTGGAAGCTGTGGG 230218 Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGC 116030 ||| ||||| | || ||| |||||||| ||| || || | || | || Sbjct 230217 CATAGGTGCAACAAGCAGGGAGTTGCGGACACCGTGTTGGCTGATCTTGGCTTTCAAAGC 230158 Query 116031 GTCCCAGTCGTAGTTGAGCTTT--GTCTCCCCCTCCCACATATCAAACTGGAGGATACCT 116088 | ||||||| | || | | || | | | ||||||| || | |||||| | || Sbjct 230157 GGCCCAGTCCCAAA-GATCGGTAGGTGTGACAC-CCCACATGTCGTATTGGAGGTTGCCC 230100 Query 116089 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAG 116148 | ||| | || || | |||| ||||| | || || | ||||||||| | Sbjct 230099 TTGGAGACAGGACTGCCTTGGTATGTTTCATAAGCACCGTCTTGTTGAGCCAATTCGCAT 230040 Query 116149 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 116208 ||| || | ||||| | || || || ||||| || | || | | |||||| Sbjct 230039 GACGCTTCCAAAGCTGCATAGTAGATGGTTTCAAAGATCTGTTGGTTGAGTTTTTTGGCC 229980 Query 116209 TCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 116268 || ||||| ||||| | | || | || || |||| || | |||||||||||| Sbjct 229979 TCCTCGGATTCAAAGGGGTAGCGCATGAGCATGAAGGCATCAGCCAAGCCTTGGACACCG 229920 Query 116269 AGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTCCACGGGATAAAAATT 116327 || ||||| |||||||| | | || || | ||| ||| | |||| || ||| |||| Sbjct 229919 AGACCAATGGGGCGATGGCGTTTGTTGGATCGTTC-AGCTTCCACCACAGGGTAATAATT 229861 Query 116328 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387 | ||||| | | | || | ||| ||||||| || || |||| || || ||||| | Sbjct 229860 GATGTCGATGATCTTGTTCAAATTCTTGGTGATGACTTTGGTGACTTGATACAGCTTCTT 229801 Query 116388 GTAATCAAAACTGCGAGTCTCTTCATTGAC---ATACTTAGGAAGGGCGATTGACGCCAG 116444 | | ||| || | || || ||||| |||| ||| || ||||| || || Sbjct 229800 GAAGTCATAAT----ATTCCCTG--TTGACCACATACGAAGGCAGAGCGATACTGGCGAG 229747 Query 116445 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGA 116504 |||||| || | | ||||| || ||| || | |||||| ||||||| || Sbjct 229746 ATTACAGACGGCGACTTCATCAGGGCTAGAGTATTCGACAATTTCGGTACACAGGTTGCT 229687 Query 116505 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAG 116564 | || || || |||| ||| | |||||| ||||| |||||| ||||||||||| || Sbjct 229686 GCATTTGATAGTTCCCAGGTTTTGTTGATTAGACTTGCGGTTACATGCATCCTTGTAAAG 229627 Query 116565 CATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGG 116623 ||| | || |||| || || ||||| | | | ||| || | ||| | | | | | Sbjct 229626 CATGAAGGGGTTCCCAGTTTCAGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTGAGC 229567 Query 116624 CTGGCAC-AGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAAC 116682 || | | || ||| || || || ||| || || ||| | || ||||| || Sbjct 229566 CTTGATCGTTTGACGT--GCGCGGCCTTCCCGTTCATATTTTTCAAAAAGCGCCTCGAAT 229509 Query 116683 TCTTCA-CCCACAGCCTCTGAGAGCCCTGGTGCCTTATCT-GGACAGAAGAGAGACCATT 116740 || ||| |||||| | ||| | || || | ||| || ||||| || || ||||||| Sbjct 229508 TCGTCACCCCACA-CATCTTGTAAACCAGGAG-CTTCGCTAGGACAAAACAGGGACCATT 229451 Query 116741 GACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGAT 116800 |||| | || || |||||||||||||| || ||||||||||| || ||||||||| Sbjct 229450 CACCATTGGCTTCCACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCATAGAAGAGAT 229391 Query 116801 CCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATAT 116860 | ||| || ||| || | || ||| || | ||||||||| | || || Sbjct 229390 CACGAGCCCGGATTTCGTCTTTGCCGACATTCTTGCGGAGATCCAAAAAGGTGAAGACAT 229331 Query 116861 CCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGACGACCAGCCTGG 116916 | || ||||| ||||| || |||| |||| | ||| | | | | ||| | || Sbjct 229330 CAGCATGCCAAGGTTCAAGATACATGGCGAAAGCACCAGGTCGTTTGTTG-CCACCTTGA 229272 Query 116917 TTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGG 116976 | ||||| | || || ||| || || || ||||| |||| ||||||| || | | Sbjct 229271 TCCACATAACGAGCAGTGTTGTTGAAGACACGGAGCATAGGAAGAATACCATTGGAGTAG 229212 Query 116977 CCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAA 117034 || ||||| || || || ||| | |||| | || | |||||||| | || | Sbjct 229211 CCGTTTGTACCAGCAATGTAGGAGCC--AGTGGCACGGATGTTGTGGATGTTGAGCCCGA 229154 Query 117035 TACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGA 117094 | || ||||| ||||||||||| || || || | || | ||||||| || || | Sbjct 229153 TCCCGCCTGCGGTTTTTGAGATTTGCGCACAGACCTTCAGTGTTTCGTAGATGCCTTCAA 229094 Query 117095 TCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAG 117154 | ||||| |||| | | || | |||||| || | || || | || ||||| | Sbjct 229093 TGGAGTCTTCCTTCATGGTGAGCAAGAAGCAAGAGGAGAGCTGAGGACGAGGAGTACCGG 229034 Query 117155 CGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTC 117213 | ||||| | |||||| | |||||| |||| ||| || ||||| || |||||| Sbjct 229033 CATTGAATAAGGTTGGACTGGCGTGGGTGAA-GTACTTTTCCGACATGAGATTGTAGGTT 228975 Query 117214 TCCAAGACAGAGGGAATGTCTTCCCCGTGAATACC 117248 || | | ||| || ||||| || |||||||| Sbjct 228974 TCGATAGCCGAGTCGATATCTTCGCCATGAATACC 228940 >seq319 Length=278629 Score = 89.7 bits (98), Expect = 6e-13 Identities = 146/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| || ||||| | | ||||||||| || |||||| || ||| ||||| || || Sbjct 176454 GTGGAGGCCTTCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAAACCAGGCATCAGGCC 176513 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 || ||||| | ||| || || | ||| | || ||||||||||| || ||||| Sbjct 176514 ACGTTTCTTGAGCCAAAAGATGGAGGCAAAGGCACCCGAGAAGAAGATACCTTCCACGGC 176573 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 127710 || || || | |||||||| |||||||| | || | | |||| | || Sbjct 176574 AGCAAAGGCGACAAGACGCTCAGCAAAGGATTCG---TTGCCACTGATCCACCGGAAAGC 176630 Query 127711 CCACTGTGCCTTTTTCTCGATACATGGGAC 127740 ||| | |||||||||| |||||| ||||| Sbjct 176631 CCAATCAGCCTTTTTCTTGATACAAGGGAC 176660 >seq3304 Length=726533 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 115553 TTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTG 115612 ||||||| | ||||||||||| |||||||| |||| ||||| ||||| | ||||||| Sbjct 123333 TTGATCGTAAATAGTACATCCCGGTCTTGAGTCCCTTTTTCCAAGCATAGAAGTGCATTG 123392 Query 115613 AGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGA 115672 ||| | |||| | || || | ||||||| ||||| ||| ||||| |||| Sbjct 123393 AGGTGAGCTTGCCGTAGGTAGGTTCGCCTGTGAAGAGATTCATGGATTGCGATTGGTCGA 123452 Query 115673 TGAAGCGTCCCCGATCCGCCGCCATATCAATCA-CATCCTTCATCTTGATTTCCCACACA 115731 | ||| | || || || ||||| || || | | || | | ||||||||| || Sbjct 123453 TAAAGGCAGCACGGTCGGCGGCCATGTCGATGATGACCCGTTGT-GAGATTTCCCAGACT 123511 Query 115732 GTTCTGTAGAGGTTCTTAATATCATCTGGGAT 115763 || ||||||| ||| | |||||| ||||| Sbjct 123512 GTCTTGTAGAGTGCCTTGAGATCATCAGGGAT 123543 >seq2275 Length=1761326 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| || || ||||| ||| ||| ||||| || |||||| || || Sbjct 1159618 GCAAAGTCGGTGTGAAGGCCTTCGTCTCGGCTGATCAGTTCGTTGGAGAAGGTCAAGCCA 1159677 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| | ||| |||||||| | ||| || || | |||| |||||||||||||| Sbjct 1159678 GGCATCAAACCACGCTTCTTGAGCCAAAAGATAGAGGCGAATGCACCAGAGAAGAAGATA 1159737 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGA 127680 || || ||| || || || | || || ||||||||||| Sbjct 1159738 CCTTCAACAGCAGCAAAGGCGACAAGTCGTTCGGCAAAGGA 1159778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613466263732080