Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1090 167 4e-36 seq3304 114 2e-20 seq319 96.9 6e-15 >seq1090 Length=283134 Score = 167 bits (184), Expect = 4e-36 Identities = 443/673 (66%), Gaps = 4/673 (1%) Strand=Plus/Minus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 ||||| || |||| ||||||| || ||||| | | | || || |||||||||||| Sbjct 230669 TCCACGGTAAACTTGATGGCGTCGACAGCAGGTCGTGTGCGGAGGTAATACATGCCGGTC 230610 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || || ||||| | ||| || || | |||||| | ||| |||| | ||| ||| | Sbjct 230609 TTGAGCCCCTTTTTCCATCCATAAAAGTGCATACTGGTCAGCTTGCCAAAGTTAGGGACA 230550 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATA 204022 | ||| || |||| || ||||||||||| || | | ||||||| ||||||||| Sbjct 230549 CCGATGAAGATATTCAAGCTTTGACTTTGGTCGATAAAGGCCCCCCGATCAGCGGCCATA 230490 Query 204023 TTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGA 204082 | || | || ||||| || ||||| ||||||||| ||| || || || | Sbjct 230489 TCAATGAGTGTGCGTTGCGAGATTTCCCATACCGTCTTGTACATTGCTTTGAGATGATCC 230430 Query 204083 GGCACATCTTCCC-ACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCT 204140 || | | ||| | || ||| | |||||| |||| | ||| | | || | | | Sbjct 230429 GGGA--TGTTCTGGATGTTCTGTACCGAGCCACTGTCAGACATGATGCGGTTCTTGATGT 230372 Query 204141 CCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAA 204200 | || ||| ||||| | || || || | || ||||||| ||| || | Sbjct 230371 CTTCGTTCCAGATGCCGAGTTCGACCAAGTCTTTGAGGAGCCAAGGGTTGACGATTTGGA 230312 Query 204201 AGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGT 204260 | || || | || || | |||||| | |||||| |||| | |||||||| |||| Sbjct 230311 ATTCACCAGCGAGGACACGACGGGTGTAGAGGTTGGAGGTGTAAGGTTCGAAGCATTCGT 230252 Query 204261 TGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGC 204320 || ||||| || || | |||| || |||||||| || || | ||||||||||||| Sbjct 230251 TGAAGCCGAGGATTTGCGAGGTGGAAGCTGTGGGCATAGGTGCAACAAGCAGGGAGTTGC 230192 Query 204321 GCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTT 204380 | ||||||| || || | || |||| || || |||||| | | | ||| Sbjct 230191 GGACACCGTGTTGGCTGATCTTGGCTTTCAAAGCGGCCCAGTCCCAAAGATCGGTAGGTG 230132 Query 204381 TCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCG 204440 | || |||||||||||| | || | | |||| | ||| || ||||| | ||| || Sbjct 230131 TGACACCCCACATGTCGTATTGGAGGTTGCCCTTGGAGACAGGACTGCCTTGGTATGTTT 230072 Query 204441 GATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGG 204500 ||||| || | || |||| | ||| || || ||| || |||||| |||| Sbjct 230071 CATAAGCACCGTCTTGTTGAGCCAATTCGCATGACGCTTCCAAAGCTGCATAGTAGATGG 230012 Query 204501 TCTCAAAGATCTG 204513 | ||||||||||| Sbjct 230011 TTTCAAAGATCTG 229999 >seq3304 Length=726533 Score = 114 bits (126), Expect = 2e-20 Identities = 393/602 (65%), Gaps = 12/602 (2%) Strand=Plus/Plus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 || || || |||| || |||| |||||||||| | | |||||| |||||||| || Sbjct 453734 TCGACGGTAAACTTGATAGCGTCGACGGCAGGCCGTGTGCGCAGATAATACATGCCAGTT 453793 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || || ||||| | ||| || || | ||||||| | || || | | | ||||| | Sbjct 453794 TTGAGCCCCTTTTTCCAGCCATAAAAGTGCATGCTTGTCAACTTTCCAAAGGTGGGGACA 453853 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATA 204022 | || | ||||| || |||||||| || |||| | | ||||| || |||||| Sbjct 453854 CCGATAAAGACATTCAGGCTTTGACTTTGGTCAATAAAAGCCCCGCGATCGGCCGCCATA 453913 Query 204023 TTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGA 204082 | || | || ||||| || ||||||||||||||| ||| | | || | | || Sbjct 453914 TCAATCAGAGTGCGTTGCGAGATTTCCCACACCGTCTTGTACATGGC-CTTGAGAGTATC 453972 Query 204083 GGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTC 204141 || | | || || | |||||| |||| ||||| | | || | | || Sbjct 453973 GGGGAGTGACGGGATGTGTTGCACCGAGCCACTGTCAGCCATGATGCGGTTCTTGATGTC 454032 Query 204142 CTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAA 204201 || ||| | || | | || || ||| | ||| ||||||| || || || Sbjct 454033 TTCGTTCCAGAGACCGAGCTCGACCAAGTCCTTGAGCAGCCATGGGTTGACGACTTGGAA 454092 Query 204202 GTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTT 204261 || |||| ||||| | |||||| | || ||| ||| | |||||||| ||||| Sbjct 454093 TTCACCGGCAAGCACACGGCGGGTGTAGAGATTGGAGGTATAGGGTTCGAAGCATTCGTT 454152 Query 204262 GTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCG 204321 | ||||| || || | ||| ||| ||||||||||| || | || || |||||||| Sbjct 454153 GAAGCCGAGGATTTGTGATGTGGAGGCGGTGGGCATGGGGGCTACCAGGAGCGAGTTGCG 454212 Query 204322 CACACCGTATTTTTGGACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCATCG--CACTGGG 204378 || |||| || | | | || || |||| |||||||| ||| | | | || Sbjct 454213 GACGCCGT-GCTTGGCAATGTCGGCTTTGAGAGTCGTCCAGTC--CCATAGATCGGTCGG 454269 Query 204379 TTTCACGCCCCACATGTCGAACTGAAAGATG--CCTTGACTGACTGGGCTGCCCTTGTAC 204436 | | ||||||||||||||| | || || || ||||| | || |||| ||||| ||| Sbjct 454270 TGTGACGCCCCACATGTCGTATTG-CAGTTGGCCCTTGGAT-ACAGGGCAGCCCTCGTAA 454327 Query 204437 GT 204438 || Sbjct 454328 GT 454329 Score = 104 bits (114), Expect = 4e-17 Identities = 288/439 (66%), Gaps = 2/439 (0%) Strand=Plus/Plus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 ||||||||| || || |||||||| | |||||||||||||| |||| || | || Sbjct 454972 CTCCATAAAGAGATCAGGAATCCACAGAGCATAAAACAGATCACGAGCCCGGCTTTCATC 455031 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAA 205284 | || | ||||| || ||||| | | | ||| || ||||| || || | Sbjct 455032 TTTGCCCACATTCTTGCGCAGATCCAGGAACGAGAAGACGTCAGCATGCCAAGGTTCGAG 455091 Query 205285 CCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGC 205344 | | || | ||||| || | ||||| ||||| || ||||| ||||| | Sbjct 455092 GTAGATTGCAAAGGCGCCAGGACGTTTGTTGCCACCTTGATCCACATAGCGAGCAGTGTT 455151 Query 205345 GTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGC 205404 |||||| ||||| ||||| || | |||||||| | | ||||| |||| ||| Sbjct 455152 GTTGAAGACTCGAAGCATAGGAAGGAGACCGTTTGAGTGGCCGTTGGTGCCAGCAATGTA 455211 Query 205405 CGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCG-CCAATCCCGCCAGAACACTTGGCGA 205463 ||||| ||| | | |||| ||| || | | || || ||||||| ||||| || Sbjct 455212 GGAGCCGGTAGCGCGAATGTTGTGGAT-GCTGAGCCCGATACCGCCAGCCGTCTTGGAGA 455270 Query 205464 TCTGGGCGCACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCA 205523 |||| || |||| || ||||| ||| || ||| |||| ||||| || || |||| Sbjct 455271 TCTGTGCACACTGTTTGAGAGTATCGTAAATCCCTTCGATCGAATCTTCTTTCATCGTCA 455330 Query 205524 CCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGG 205583 || | |||| || | ||| | | | ||||| ||| ||| | ||||| |||| Sbjct 455331 GCAAAAAGCAGGAGGACAGTTGCGGTCGGGGAGTGCCGGCGCTGAATAAGGTGGGACTGG 455390 Query 205584 CGTGGCTGAAGCGCTTCTC 205602 ||||| | ||| ||| || Sbjct 455391 CGTGGGTAAAGTACTTTTC 455409 >seq319 Length=278629 Score = 96.9 bits (106), Expect = 6e-15 Identities = 153/219 (70%), Gaps = 3/219 (1%) Strand=Plus/Plus Query 159913 AAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGA 159972 |||||| | ||| || || ||| ||| || || ||||| | ||||| |||||||| Sbjct 176430 AAACAGTAAGCAGGCGAAATCGGTGTGGAGGCCTTCGTCTCTGCTGATGAGTTCGTTGGA 176489 Query 159973 CATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACC 160032 | | | | || ||||| | ||||| ||||||||||| |||| ||||| ||||| Sbjct 176490 GAAGGTCAAACCAGGCATCAGGCCACGTTTCTTGAGCCAAAAGATGGAGGCAAAGGCACC 176549 Query 160033 GCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTT 160092 || ||||| || |||||||| ||||| || || || | |||| |||| || ||| Sbjct 176550 CGAGAAGAAGATACCTTCCACGGCAGCAAAGGCGACAAGACGCTCAGCAAAGGATTCGT- 176608 Query 160093 GGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTT 160131 || || | |||||| ||||| |||||||| || Sbjct 176609 --TGCCACTGATCCACCGGAAAGCCCAATCAGCCTTTTT 176645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795102143269280