Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq3256 147 5e-30 seq3208 125 2e-23 seq236 125 2e-23 seq1528 116 9e-21 seq304 116 9e-21 seq2275 105 2e-17 seq197 89.7 1e-12 >seq3256 Length=796958 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || |||||||| || || ||||||| ||||||||||| |||||| | |||||| Sbjct 724525 AGGACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAAAGTACGACCATCT 724466 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| ||||| | ||| |||||||| || || ||||| || Sbjct 724465 TCGAGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGGGATACCTTCCTTGTCT 724406 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||||||||| ||| |||| | ||| | | ||| || ||||| || || ||| Sbjct 724405 TGGATCTTTTGCTTGACGTTATCGATAGAGTCAGAGGATTCCACTTCCAAAGTAATAGTC 724346 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| ||||| Sbjct 724345 TTGCCAGTCAGGGTCTTGACAAAGATTTG 724317 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || ||||| || |||||||| | ||||||||||| | ||| | |||||| Sbjct 723385 AGGACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCT 723326 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||||| |||||||||||||| || |||||||| || |||||||| || Sbjct 723325 TCCAATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTTATCT 723266 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||||||||| ||| |||| || ||| | | ||| || || | ||||| ||| Sbjct 723265 TGAATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACTTCGAGAGTGATGGTC 723206 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || || || ||||| Sbjct 723205 TTGCCAGTCAAGGTCTTGACGAAGATTTG 723177 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| ||||| || |||||||||| ||||||||||| | ||| | |||||| Sbjct 723841 AGAACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCT 723782 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||| || || || |||||||| | ||| ||||| || || || ||||| || Sbjct 723781 TCCAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGGGGGATACCTTCCTTGTCT 723722 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||||||||||| |||| | ||| | | ||| || |||| ||||| ||| Sbjct 723721 TGGATCTTTTGCTTCACATTGTCGATAGAGTCAGAGGATTCCACTTCCAGAGTGATTGTC 723662 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||| || ||||| ||||| Sbjct 723661 TTGCCAGTCAAAGTCTTGACAAAGATTTG 723633 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| ||||| || |||||||||| ||||||||||| | || | |||||| Sbjct 724069 AGAACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCT 724010 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||| || || || |||||||| | || || ||||| || |||||||| || Sbjct 724009 TCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATTCCTTCCTTGTCT 723950 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||||||||||||| |||| | ||| | | ||| || || | ||||| || Sbjct 723949 TGGATCTTTTGCTTCACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTT 723890 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || || ||||| Sbjct 723889 TTACCAGTCAGGGTCTTGACGAAGATTTG 723861 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| ||||| || || ||||||| ||||||||||| | || | |||||| Sbjct 724297 AGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCCATCT 724238 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| || || || |||||||| | ||| || ||||| || || ||||| || Sbjct 724237 TCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTTGTCT 724178 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||||||||||| |||| | ||| | | ||| || |||| ||||| ||| Sbjct 724177 TGGATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGATTGTC 724118 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || | || |||||||| ||||| Sbjct 724117 TTACCAGTCAAGGTCTTCACAAAGATTTG 724089 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| || |||||||||| ||||||||||| | || | ||||||||||| || Sbjct 723604 TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTCCAGTTGT 723545 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || |||||||| | || || ||||| || || ||||| || || |||||| Sbjct 723544 TTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTGGATCTTT 723485 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||||| ||| |||| | ||| | | ||| || ||||| || || ||||| || || Sbjct 723484 TGCTTGACGTTATCGATAGAGTCGGAGGATTCCACTTCCAAGGTAATGGTCTTGCCAGTC 723425 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | || || ||||| ||||| Sbjct 723424 AAGGTCTTGACAAAGATTTG 723405 >seq3208 Length=262556 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || || |||||||||| |||||| |||| | ||| | |||||| Sbjct 83852 AGCACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAGAGAGTGCGACCATCT 83911 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || || || |||||||| || |||||||| ||| || |||||| || Sbjct 83912 TCTAGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCT 83971 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||||||||| ||| |||| | ||||| | ||| || |||| ||||| ||| Sbjct 83972 TGAATCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTGATAGTC 84031 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||| || || || || || Sbjct 84032 TTGCCAGTCAAAGTCTTGACGAAGATCTG 84060 >seq236 Length=318481 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || || || ||||||| ||||||||||| | || | |||||| Sbjct 111768 AGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCT 111827 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||| || || ||||| ||||| ||||| || || || ||| || |||||| || Sbjct 111828 TCCAGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCT 111887 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||||||||| ||| |||| | ||| | | ||| || || | ||||| ||| Sbjct 111888 TGAATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTC 111947 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| ||||| Sbjct 111948 TTGCCAGTCAGGGTCTTGACAAAGATTTG 111976 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| || |||||||| | |||||| |||| | || | ||||||||||| || Sbjct 112589 TGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGTTGT 112648 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||| ||||||||||| || ||||| ||| ||| ||||| || ||||||||| Sbjct 112649 TTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTT 112708 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||||| || |||| || ||| | | ||| || || | ||||| ||||| || || Sbjct 112709 TGCTTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTGCCTGTA 112768 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| Sbjct 112769 AGCGTCTTGACGAAGATTTG 112788 Score = 95.1 bits (104), Expect = 3e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || || || ||||||| ||||||||| | | || | |||||| Sbjct 111996 AGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCT 112055 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||| || || || || ||||| ||||| || || || ||| || |||||| || Sbjct 112056 TCCAGTTGTTTACCAGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCT 112115 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||||||||| ||| |||| | ||| | | ||| || || | ||||| ||| Sbjct 112116 TGGATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATGGTC 112175 Query 199598 TT 199599 || Sbjct 112176 TT 112177 >seq1528 Length=6275 Score = 116 bits (128), Expect = 9e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| ||||| || |||||||||| ||||||||| | |||||| | |||||| Sbjct 4519 AGGACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTGCGACCATCT 4460 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| || |||||||| ||||| ||||| || ||| ||| ||||| || Sbjct 4459 TCGAGTTGCTTGCCAGCGAAGATAAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCT 4400 Query 199538 TGAATCTTTTGCTTCAC 199554 || ||||||||||| || Sbjct 4399 TGGATCTTTTGCTTGAC 4383 >seq304 Length=62727 Score = 116 bits (128), Expect = 9e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | |||||||| || |||||||||| ||||||||| | ||| || | |||||| Sbjct 38838 AGGACCAAATGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAACGTACGGCCATCT 38897 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||| ||||| ||||| ||||| || ||| ||| ||||| || Sbjct 38898 TCGAGTTGCTTGCCGGCAAAGATAAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCT 38957 Query 199538 TGAATCTTTTGCTTCAC 199554 |||||||||||||| || Sbjct 38958 TGAATCTTTTGCTTGAC 38974 >seq2275 Length=1761326 Score = 105 bits (116), Expect = 2e-17 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| ||||| || |||||||| | ||||||||||| |||||| | || ||| Sbjct 759220 AGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCGTCT 759279 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| || || ||||| ||||| ||||| || ||| || ||||| || Sbjct 759280 TCGAGTTGCTTGCCAGCAAAGATAAGACGTTGCTGATCAGGAGGGATACCTTCCTTGTCT 759339 Query 199538 TGAATCTTTTGCTTCACG 199555 || ||||||||||| ||| Sbjct 759340 TGGATCTTTTGCTTGACG 759357 >seq197 Length=169696 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | || || || || |||||||||| ||||||||||| | ||| | |||||| Sbjct 118647 AGGACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCT 118588 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||||| || ||||| | ||| ||||| || || || ||||| || Sbjct 118587 TCCAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCAGGGGGGATACCTTCCTTATCT 118528 Query 199538 TGAATCTTTTGCTTCAC 199554 || ||||||||||| || Sbjct 118527 TGGATCTTTTGCTTGAC 118511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178840969867646