Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2275 161 1e-34 seq319 158 1e-33 seq3208 127 2e-24 seq3256 118 1e-21 seq236 96.9 3e-15 >seq2275 Length=1761326 Score = 161 bits (178), Expect = 1e-34 Identities = 340/504 (67%), Gaps = 5/504 (1%) Strand=Plus/Plus Query 132606 TTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGT 132665 |||||| ||| || ||| |||||||| || ||||| || | | || || || Sbjct 1159326 TTGATAATCGGAGACACGTTTTTCAAAAAAGTTGGTTTTGCCTTGGAGAGAGATCAGATC 1159385 Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATC-AGGTCGACGAGCA 132724 |||||| || |||||||||| | ||||||||||| | || | || |||| || | Sbjct 1159386 CATAAAGTCGAAGGGGTTGGTGGATTTGTAGTGCTTC-TCTTGACCCAGAGCGACCAGAA 1159444 Query 132725 GCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGAC 132784 | | ||||| ||||| ||||||||||| |||| | | | || | || | || Sbjct 1159445 GGCGATCGGCGACGAATTCGATGTATTGGCACATAAGCTTGGAGTTCATACCGATAAGGG 1159504 Query 132785 GCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTT 132844 || || || || ||||| | || || ||||||||||| || ||| | ||||| Sbjct 1159505 CGACAGGAAGAGCGTCGGTCAAGAATTCCTGTTCGATGGCGACGGCTTCGACAATGATTT 1159564 Query 132845 CCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGT 132904 | || || || ||| || | | | ||| ||||| | |||||| ||||||| Sbjct 1159565 CAAGGACTCGGGCGTGGCTAGGTTGGTAGTGGAGATGGTTGAATAGCAAGCAGGCAAAGT 1159624 Query 132905 CGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGA 132964 || || | ||| ||||| | | || ||||||||| ||| |||||||| ||||| | Sbjct 1159625 CGGTGTGAAGGCCTTCGTCTCGGCTGATCAGTTCGTTGGAGAAGGTCAAGCCAGGCATCA 1159684 Query 132965 GGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGA 133024 || || || ||||||||||| || | |||||| || || ||||||| || || | Sbjct 1159685 AACCACGCTTCTTGAGCCAAAAGATAGAGGCGAATGCACCAGAGAAGAAGATACCTTCAA 1159744 Query 133025 CGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCA 133084 | || || || || || || || ||| | || || ||| |||| |||||| || | Sbjct 1159745 CAGCAGCAAAGGCGACAAGTCGTTCGGCAAA---GGATTCGTTGCCACTGATCCATCGGA 1159801 Query 133085 GCGCCCATTCGGCCTTTTCTTTGA 133108 ||||| |||||||||| |||| Sbjct 1159802 AAGCCCAGTCGGCCTTTTTCTTGA 1159825 >seq319 Length=278629 Score = 158 bits (174), Expect = 1e-33 Identities = 342/507 (67%), Gaps = 11/507 (2%) Strand=Plus/Plus Query 132606 TTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGT 132665 |||||| ||| || ||| || || || || || || || | | ||| || || Sbjct 176151 TTGATAATCGGAGACACGTTTTTCGAAGAAGTTTGTCTTGCCTTGAAGGGAGATCAGGTC 176210 Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATC-AGGTCGACGAGCA 132724 |||||| || ||||| |||| | ||||||||||||| | || | || | || | | Sbjct 176211 CATAAAGTCAAAGGGATTGGAAGAGTTGTAGTGCTTG-TCTTGACCGAGAGCCACCAAGA 176269 Query 132725 GCCTGTCGGCCACGAACTCGATGTATTGCGACAT---GGTTTCGCAATTAAGTCCCAGCA 132781 | | ||||| ||||| ||||||||||| |||| |||| | || | || | | Sbjct 176270 GACGATCGGCGACGAATTCGATGTATTGACACATTAAGGTTGAG---TTCATGCCAATGA 176326 Query 132782 GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 || ||| || || || || || | || ||||||||| || ||||| ||| | || Sbjct 176327 GAGCCACAGGGAGAGCGTCCGTCAAGAATTCTTGCTCGATCGCCACCGCTTCGACAATGA 176386 Query 132842 TTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAA 132901 |||||| || || | ||| || | | | ||| |||| ||||| || | Sbjct 176387 TTTCCCGCACCCGGTCACGGCTAGGTTGGTTGTGGAGATGGCCAAACAGTAAGCAGGCGA 176446 Query 132902 AGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCA 132961 | ||| || | ||| ||||| ||| |||||||||||| ||| ||||| || |||| Sbjct 176447 AATCGGTGTGGAGGCCTTCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAAACCAGGCA 176506 Query 132962 TGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCT 133021 | ||||| ||||| ||||||||||| |||| ||| || ||||| ||||||| || | Sbjct 176507 TCAGGCCACGTTTCTTGAGCCAAAAGATGGAGGCAAAGGCACCCGAGAAGAAGATACCTT 176566 Query 133022 CGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGC 133081 | ||||| || || || || || ||||| | || || ||| |||| |||||| | Sbjct 176567 CCACGGCAGCAAAGGCGACAAGACGCTCAGCAAA---GGATTCGTTGCCACTGATCCACC 176623 Query 133082 GCAGCGCCCATTCGGCCTTTTCTTTGA 133108 | | ||||| || ||||||| |||| Sbjct 176624 GGAAAGCCCAATCAGCCTTTTTCTTGA 176650 >seq3208 Length=262556 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || |||||||| || || ||||| ||||| || | || || || | | Sbjct 84291 ATGCAAATCTTTGTAAAAACTCTTACTGGCAAGACCATTACATTGGAAGTGGAATCTTCT 84232 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | |||| | ||| |||| |||| || || || || || || ||||||| Sbjct 84231 GACTCCATCGACAACG-TCAAACAAAAGATCCAAGATAAGGAAGGCATCCCACCCGACCA 84173 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | || || |||||||| || || | ||||| ||| ||||||||| Sbjct 84172 ACAGCGCCTTATCTTTGCCGGGAAACAGCTTGAAGATGGCCGCACACTCTCCGACTACAA 84113 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||||||| |||| || ||| ||||||| ||| Sbjct 84112 CATTCAAAAGGAATCGACTCTTCATCTGGTGCTTCGT 84076 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| || ||||| | || || || || | Sbjct 84063 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACTATCACTCTGGAAGTGGAATCCTCA 84004 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | |||| | || |||| || | || ||||| || || || | ||||| Sbjct 84003 GACTCTATCGACAACG-TCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGACCA 83945 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || |||||||| | || |||||||| || || || | ||||| ||| || ||||| Sbjct 83944 GCAACGGCTCATCTTTGCAGGCAAACAACTAGAAGATGGTCGCACTCTCTCTGATTACAA 83885 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||||||| | || || || |||||||| ||||| |||| ||| Sbjct 83884 CATCCAAAAGGAATCAACCCTACACTTGGTGCTCCGTTTACGAGGTGGC 83836 >seq3256 Length=796958 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || ||||| ||||| ||| | || || || || || Sbjct 723402 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATTACCTTGGAAGTGGAATCCTCC 723461 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | |||| | || |||| |||| ||||| || || || ||| | ||||| Sbjct 723462 GACTCTATCGATAACG-TCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCA 723520 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | ||| |||||||| ||||| || | ||||| ||| |||||||| Sbjct 723521 ACAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAA 723580 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||||| | || || |||||||| || ||| Sbjct 723581 CATCCAAAAGGAATCTACTCTTCATTTGGTTCTCCGT 723617 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || || ||||| |||||| | || || || || | Sbjct 723858 ATGCAAATCTTCGTCAAGACCCTGACTGGTAAAACAATCACCCTTGAAGTGGAATCCTCT 723917 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | |||| | || |||| |||| ||||| || ||||| ||| | ||||| Sbjct 723918 GACTCTATCGACAACG-TGAAGCAAAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCA 723976 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | ||| |||||||| ||||| || | ||||| ||| |||||||| Sbjct 723977 ACAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAA 724036 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||||| | || || || |||| || ||| Sbjct 724037 CATCCAAAAGGAATCTACTCTTCACCTGGTTCTCCGT 724073 Score = 105 bits (116), Expect = 7e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| ||||| || || | || ||||| |||||||| |||| || || | Sbjct 723171 AACATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTTGAATCT 723230 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 ||||| | | | |||| | || |||| || | || || || ||||| ||| | || Sbjct 723231 TCCGACTCCATCGACAACG-TCAAGCAAAAGATTCAAGATAAGGAAGGAATCCCCCCAGA 723289 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| || || ||||| | ||| ||||| || |||| || | ||||| || ||||| Sbjct 723290 CCAGCAACGACTCATCTTCGCCGGCAAGCAATTGGAAGATGGCCGCACTCTTTCTGACTA 723349 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||||||| | || || ||| |||| || ||| Sbjct 723350 CAACATTCAAAAGGAATCTACTCTTCATCTGGTCCTCCGT 723389 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || ||||| || ||||| | || || || || | Sbjct 723630 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACAATCACTCTGGAAGTGGAATCCTCT 723689 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| | | | | || |||| |||| ||||| || || || ||| | || || Sbjct 723690 GACTCTATCGACAATGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCTGATCAG 723749 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | ||| || ||||| ||||| || | ||||| ||| ||||||||| Sbjct 723750 CAACGTTTGATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACTCTCTCTGACTACAAC 723809 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| | || || || ||||| || ||| Sbjct 723810 ATCCAAAAGGAATCTACTCTTCACTTGGTTCTCCGT 723845 >seq236 Length=318481 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || ||||| || |||||| | || || || || | Sbjct 111979 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 111920 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | |||| | || |||| || | || ||||| || || || | || || Sbjct 111919 GACTCTATCGACAACG-TCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGATCA 111861 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | || || ||||| ||||| || | ||||| ||| |||||||| Sbjct 111860 ACAACGTCTTATCTTTGCCGGTAAACAACTGGAAGATGGCCGCACGCTCTCTGACTACAA 111801 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||| ||| | || ||||| ||||| || ||| Sbjct 111800 CATCCAAAAAGAATCCACCCTGCACTTGGTCCTCCGT 111764 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 |||| |||| || ||||| || || || | || ||||| || || || | || || | Sbjct 112125 AAAAGATCCAAGATAAAGAAGGCATCCCTCCTGATCAACAACGTCTTATCTTTGCTGGTA 112066 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 |||| ||||| || | ||||| ||| ||||||||||||||||| ||| | || |||| Sbjct 112065 AACAACTGGAAGATGGCCGCACGCTCTCGGACTACAACATCCAAAAAGAATCCACCCTGC 112006 Query 38446 ATTTGGTGCTGCGT 38459 | ||||| || ||| Sbjct 112005 ACTTGGTCCTCCGT 111992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500139425969920