Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3262 199 3e-45 seq909 168 5e-36 seq1912 152 4e-31 seq1749 136 3e-26 seq2275 113 3e-19 seq1141 89.7 4e-12 >seq3262 Length=45897 Score = 199 bits (220), Expect = 3e-45 Identities = 468/698 (67%), Gaps = 29/698 (4%) Strand=Plus/Plus Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 |||| ||||||||||| ||||| | ||||| || | ||||| |||| ||| | | Sbjct 37223 TATCGAAATCTTCACCACCCAAGTGAGTATCACCAGCAGTAGCCAACACTTCGAAGATAC 37282 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 |||| |||| ||||| |||| |||||| ||| |||||||||| |||| | | || | Sbjct 37283 CATCGTCAATAGACAGGAGAGAGACATCAAAGGTACCACCACCCAAATCATAGACGAGCA 37342 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 | ||| |||| | | ||| || || | |||||| |||| || || ||||| |||| Sbjct 37343 CGTTCTTTTC---ACCATCGTTCTTGTCCAAACCATAGGCAATGGCGGCGGCAGTGGGTT 37399 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 |||| || || | | || || | |||||| || | || ||||| || |||||||| | Sbjct 37400 CATTGATGATGCGGAGAATGTTCAAACCAGCGATAGTACCAGCATCCTTGGTGGCTTGAC 37459 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 ||| | |||||| || || ||||| || || | || |||| ||| || || |||| Sbjct 37460 GTTGAGCATCGTTGAAGTAAGCAGGTACGGTCACCACAGCATGAGTCACGGTCTTGCCAA 37519 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 || || || |||| ||||| || | || | ||| || |||| ||| |||| Sbjct 37520 GGTAGGCTTCAGCAGTTTCCTTCATCTTGGTCAACACCATACCAGAGATTTCTTCAGGGG 37579 Query 518385 AATATTGCTTGGATTCATT-TTGATATGATACTTCAAAATATGGTTTATTACCAACATT- 518442 | | |||| || || |||| | |||| ||| ||| | | |||| Sbjct 37580 TAAACACCTTGTTGTCGTTCTTGA-CCGCCACTT----GGATG--TTAGGAGCGCCATTC 37632 Query 518443 ------AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAA 518496 | ||| || || || ||| ||||||||||| | ||| | || ||||| Sbjct 37633 TTGTTCACCAAC-TTGAAGGGGAAGTGCTTCATATCTGACTTGACATCCTTATCGTTAAA 37691 Query 518497 ATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTT--GGATTAATTGCAGCT 518554 | | |||||| | || || |||||||| | || || ||| ||||| ||| | Sbjct 37692 ACGGCGACCAATAAGACGCTTGGCATCAAACACAG--TTCGTTCAGGATTGGCCGCATAT 37749 Query 518555 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 518614 |||| || || || || ||||| || |||| || ||||| | ||||| || ||| Sbjct 37750 TGATTCTTAGCAGCGTCACCAATAAGTCGTTCATCATCGGTAAAGGCCACATAGGAAGGA 37809 Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCA---TTTTGCCATACA 518671 || | |||| |||||| || || |||||||||||||| |||| |||||| ||| Sbjct 37810 GTAATACGATGACCTTGGTCGTTGGCAATAATTTCAACGCGACCATTCTTTTGC---ACA 37866 Query 518672 CCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 || |||||| | || || || |||||||||||||| Sbjct 37867 CCAACACAAGAGTAGGTGGTACCCAAATCAATACCAAT 37904 >seq909 Length=171011 Score = 168 bits (186), Expect = 5e-36 Identities = 466/701 (66%), Gaps = 35/701 (5%) Strand=Plus/Plus Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 |||| ||||||||||| ||||| | |||| || | ||||| |||| || | || Sbjct 110990 TATCGAAATCTTCACCACCCAAGTGTGTATCACCAGCAGTAGCCAACACTTCAAAGATTC 111049 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 |||| || | |||||| |||| |||||| || |||||||||| |||| | | || | Sbjct 111050 CATCATCGATAGACAAGAGAGACACATCAAAAGTACCACCACCCAAATCATAGACGAGCA 111109 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 ||| | |||| | | ||| || || | |||||| |||| ||| || || || |||| Sbjct 111110 CATGCTTTTC---ACCATCGTTCTTGTCCAAACCATAAGCAATAGCGGCGGCGGTAGGTT 111166 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 |||| || ||||| | | || | ||| || || | || ||||| || |||||||| | Sbjct 111167 CATTGATGATTCTAATGATGTTCAAACCGGCGATAGTACCAGCATCCTTGGTGGCTTGAC 111226 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 ||| | |||||| || || ||||| || || | || |||| ||| || || |||| Sbjct 111227 GTTGAGCATCGTTGAAGTAAGCAGGTACGGTCACCACAGCATGAGTCACGGGCTTGCCAA 111286 Query 518325 TATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 ||| ||||| || || | ||||| || | | | ||| || |||| ||| || Sbjct 111287 GATA--CGCTTCAGCAGTCTCCTTCATCTTTGTCAGCACCATACCAGAGATTTCTTCAGG 111344 Query 518383 GGAATATTGCTTGGATTCATT-TTGATATGATACTTCAAAATATGGTTTATTACCAACAT 518441 || | | |||| |||||| |||| | |||| ||| ||| || | | Sbjct 111345 GGTAAACACCTTGTTTTCATTCTTGA-CCGCCACTT----GGATG--TTAGGGGCACCGT 111397 Query 518442 T-------AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTA 518494 | | ||||| ||| || ||| |||||||| | | ||| | |||||| Sbjct 111398 TCTTGTTCACCAACTTGAAA-GGGAAGTGCTTCATATCGGCCTTGACATCCTTATCATTA 111456 Query 518495 AAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTT--GGATTAATTGCAG 518552 | | |||||| | ||||| |||||||| | || || ||| || || ||| Sbjct 111457 TAGCGACGACCAATAAGACGTTTGGCATCAAACACAG--TTCGTTCAGGGTTGGCGGCAT 111514 Query 518553 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTC-TCTGTAAATGAAACATATGAT 518611 ||||| ||||| || || ||||| || |||| ||| || ||||| | ||||| || Sbjct 111515 ATTGATTCTTGGCGGCGTCCCCAATAAGGCGTTC-GTCGTCGGTAAAGGCCACATAAGAA 111573 Query 518612 GGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCA---TTTTGCCAT 518668 ||||| | |||| |||||| ||||| ||||| || || || ||| |||||| Sbjct 111574 GGAGTGATACGATGACCTTGGTCATTGGCAATGATCTCCACCCGTCCATTCTTTTGC--- 111630 Query 518669 ACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 |||||||| ||| | || || || || || |||||||| Sbjct 111631 ACACCTACGCAAGAGTACGTAGTGCCCAAGTCGATACCAAT 111671 >seq1912 Length=588084 Score = 152 bits (168), Expect = 4e-31 Identities = 213/298 (71%), Gaps = 8/298 (3%) Strand=Plus/Minus Query 518012 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 518071 || || | ||| || || ||||||||||| ||||| | ||||| || | ||||| | Sbjct 145262 GTGACCAAACGGTTGTCGAAATCTTCACCACCCAAGTGAGTATCACCAGCAGTAGCCTTG 145203 Query 518072 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATA 518131 |||| || | |||||||||| | ||| |||| |||||| || |||||||||| | Sbjct 145202 ACTTCAAAGATGCCATCTTCAATGGTCAAGAGAGAGACATCAAAAGTACCACCACCCAAA 145143 Query 518132 TCAAAAATAAGTACATTCATTTC----TTTGTCTTGGTTTTTATCAAGACCATACGCAAA 518187 ||||| ||||| || || ||| | ||| || || || | |||||| |||| Sbjct 145142 TCAAAGATAAGCACGTTGTGTTCGCCAGTAGTC----TTCTTGTCCAAACCATAGGCAAT 145087 Query 518188 AGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGC 518247 || || ||||| ||||| || || |||| |||||| || | ||| ||||| || | Sbjct 145086 GGCCGCCGCAGTGGGTTCGTTGATGATTCGCAAAACGTTTAAACCCGCAATGGCACCAGA 145027 Query 518248 ATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCA 518305 |||||| || ||||| | ||| || |||||||| || ||||| ||||| || || ||| Sbjct 145026 ATCTTTGGTTGCTTGGCGTTGAGAGTCGTTAAAGTAAGCAGGGACAGTGATGACCGCA 144969 Score = 107 bits (118), Expect = 1e-17 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 518513 CGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCT 518572 ||||| |||||| | | |||| | ||| | |||| ||| | ||||| ||||| Sbjct 144625 CGTTTAGCATCATAGACAGTACCACCAGCATTCAAAGCAGATTGGTTCTTGGCAGCATCA 144566 Query 518573 CCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 518632 ||||| ||| ||||| || || || | |||| | |||||||||||||| || |||||| Sbjct 144565 CCAATGAGACGTTCTTGGTCAGTGAAGGCAACAAAGGATGGAGTTGTGCGGTTGCCTTGA 144506 Query 518633 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTT 518692 || || ||||| ||||| || | | |||| ||| ||||| || || | ||||| Sbjct 144505 TCGTTGGCAATGATTTCCACACGATCGTTTTCCCACACACCAACGCAGGAGTAGGTTGTA 144446 Query 518693 CCTAAATCAATACC 518706 || ||||||||||| Sbjct 144445 CCCAAATCAATACC 144432 >seq1749 Length=282599 Score = 136 bits (150), Expect = 3e-26 Identities = 275/406 (68%), Gaps = 4/406 (1%) Strand=Plus/Minus Query 517814 AGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAA 517873 ||||||||||| || | ||| | || | | || ||||| ||||||||||| || Sbjct 161602 AGTTCTTCGAAACGGGCACGAGTCAAAGAGGTGTAGTAGTCAATACCTTCGAACAAGGAG 161543 Query 517874 TCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCT 517933 || | |||||| | ||||||| |||||||| | | ||| || ||||||||||| || Sbjct 161542 TCGATTTCAATGGAGGTTTGAGCAGAAGAAGACAAAGTACGCTTCGCACGTTCACAAGCA 161483 Query 517934 GTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTCT 517991 || | || | || | || | | ||| | | ||| | || | || | || Sbjct 161482 GTACGGAGACGACGGACAGCACGGG--GGTTGCCAGAGATATCCTTCTTGAACTTGCGCT 161425 Query 517992 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 518051 |||| |||| | | | || || | ||| || || ||||||||||| ||||| | || Sbjct 161424 TGAATTCTTGGATAAAGTGAGTGACCAAACGGTTGTCGAAATCTTCACCACCCAAGTGAG 161365 Query 518052 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACAT 518111 | | || | ||||| | |||| || | |||||||||| | ||| |||| |||| Sbjct 161364 TGTCACCAGCAGTAGCCTTGACTTCAAAGATACCATCTTCAATGGTCAAGAGAGAGACAT 161305 Query 518112 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTAT 518171 | ||| |||||||||| ||| || || || || ||| |||| || | || || | Sbjct 161304 CGAAGGTACCACCACCCAAATCGAAGATGAGCACGTTCTTTTCACCTTCATCCTTCTTGT 161245 Query 518172 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 518217 | | |||||| |||| ||||| ||||| ||||| || || ||||| Sbjct 161244 CCAAACCATAGGCAATGGCAGCGGCAGTAGGTTCGTTGATGATTCT 161199 >seq2275 Length=1761326 Score = 113 bits (124), Expect = 3e-19 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 518561 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 518620 ||||| ||||| ||||| || ||||| ||||| || | || |||| ||||| ||| Sbjct 1028202 TTGGCAGCATCCCCAATGAGTCGTTCTTGGTCTGTGAAAGCCACGAATGAGGGAGTGGTG 1028143 Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680 || ||||||||||| || ||||| |||||||| | | |||||||| ||||| |||||| Sbjct 1028142 CGGTTACCTTGATCGTTGGCAATGATTTCAACACGATCGTTTTGCCAGACACCAACACAA 1028083 Query 518681 CTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | || || || ||||||||||||| ||| Sbjct 1028082 GAGTAGGTAGTACCCAAATCAATACCAACAGC 1028051 Score = 107 bits (118), Expect = 1e-17 Identities = 243/359 (68%), Gaps = 6/359 (2%) Strand=Plus/Minus Query 517859 CCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTA 517918 ||||| ||||||| || | ||| | || ||||| || || || || | | ||| || Sbjct 1029102 CCTTCATACAAAGAGTCGATTTCCAGAGTGGTTTGCGTGGAGGAGGACAAGGTACGCTTC 1029043 Query 517919 GCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG-GCTTTTGCTGATTGATTCAAATCTG 517976 ||||||||||| || || | ||| | || | || || | || || || || Sbjct 1029042 GCACGTTCACAAGCAGTACGTAGACGGCGCACAGAGCGAGGGTTGCCAGA--CATGTCCT 1028985 Query 517977 TTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTT 518036 | ||| | || | |||||| |||| | | | || || | ||| || || ||||||| Sbjct 1028984 TCTTAAACTTGCGCTTGAATTCTTGGATAAAGTGGGTCACCAAACGGTTGTCGAAATCTT 1028925 Query 518037 CACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAG 518096 |||| ||||| | ||| | || | ||||| | |||| || | |||||||||| | Sbjct 1028924 CACCACCCAAGTGAGTGTCACCAGCAGTAGCCTTGACTTCAAAGATGCCATCTTCAATGG 1028865 Query 518097 ACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC-T 518155 ||| |||| |||||| || |||||||||| |||||| ||||| || || ||| Sbjct 1028864 TCAAGAGAGACACATCAAAAGTACCACCACCCAAATCAAAGATAAGCACGTTGTGTTCGC 1028805 Query 518156 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 ||| | || || || | |||||| |||| ||||| || || |||||||| || || Sbjct 1028804 CAGTCGT-CTTCTTGTCCAAACCATAGGCAATGGCAGCGGCCGTGGGTTCATTGATGAT 1028747 >seq1141 Length=354663 Score = 89.7 bits (98), Expect = 4e-12 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 668845 AAGATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATAT 668904 |||||||| ||||||||||||||| | | || || ||||||| |||||||| || | Sbjct 126580 AAGATTAAAGGGTAAAGAAGGTCGTCTCCGTGGCAACCTGATGGGCAAACGTGTGGACTT 126639 Query 668905 GTCTGCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCC 668964 ||||| || || || ||||| |||||| || | | | | ||||||||||| || Sbjct 126640 CTCTGCTCGAACTGTCATTACCGGTGATCCTAACCTCAGTTTGGACGAAGTTGGTGTCCC 126699 Query 668965 TCTTATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006 || | |||||| |||||||| | | |||||| || || Sbjct 126700 TCGAAGCATTGCTCGTAATCTTACCTATCCCGAAATCGTCAC 126741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780557510856628