Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1090 233 2e-56 seq2275 120 4e-22 seq3304 105 8e-18 seq319 104 3e-17 seq2869 95.1 2e-14 >seq1090 Length=283134 Score = 233 bits (258), Expect = 2e-56 Identities = 1097/1721 (64%), Gaps = 26/1721 (2%) Strand=Plus/Plus Query 111625 TCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACG 111684 ||||||| || || | ||||| ||||| |||||||| || || | | | || || ||| Sbjct 228923 TCATGCGTGTGGCCGTGGGTATTCATGGCGAAGATATCGACTCGGCTATCGAAACCTACA 228982 Query 111685 ACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACA 111743 | ||||| ||| |||| |||||| | |||||| | ||||| || ||||| Sbjct 228983 ATCTCATGTCGGAAAAGTAC-TTCACCCACGCCAGTCCAACCTTATTCAATGCCGGTACT 229041 Query 111744 CCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGC 111803 || | || || | ||| ||| ||| | | | | ||||| || || || | ||| Sbjct 229042 CCTCGTCCTCAGCTCTCCTCTTGCTTCTTGCTCACCATGAAGGAAGACTCCATTGAAGGC 229101 Query 111804 ATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATG 111863 || |||| || || | | ||||| ||||||||||| || || || |||||| | Sbjct 229102 ATCTACGAAACACTGAAGGTCTGTGCGCAAATCTCAAAAACCGCAGGCGGGATCGGGCTC 229161 Query 111864 CACATCCATGATGTCAGAGCCAACAAGTCTCGT--ATTAGAGGTACAAATGGTCAATCAG 111921 ||||||| | || | |||| | ||| | ||| |||||||| || | || Sbjct 229162 AACATCCACAACATCCGTGCCA--CTGGCTCCTACATTGCTGGTACAAACGGCTACTCCA 229219 Query 111922 ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTG 111981 |||||||| |||| ||||| || || || ||| ||| || || ||||| | |||| | Sbjct 229220 ATGGTATTCTTCCTATGCTCCGTGTCTTCAACAACACTGCTCGTTATGTGGATCAAGGT- 229278 Query 111982 GGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATG 112037 ||| | | | || || |||| | |||||||| || ||||| || ||| || | Sbjct 229279 GGCAACAAACGACCTGGTGCTTTCGCCATGTATCTTGAACCTTGGCATGCTGATGTCTTC 229338 Query 112038 GAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTC 112097 || | || | || || || | || || ||| || ||||||||| Sbjct 229339 ACCTTTTTGGATCTCCGCAAGAATGTCGGCAAAGACGAAATCCGGGCTCGTGATCTCTTC 229398 Query 112098 TCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCT 112157 | ||||||||||| || ||||||||||||||| | || || | | ||| | ||||| Sbjct 229399 TATGCTCTCTGGATCCCTGATCTCTTCATGAAGCGTGTGGAAGCCAATGGTGAATGGTCC 229458 Query 112158 CTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCC 112217 || |||||||| | | || || ||| | |||| |||||| || || || || Sbjct 229459 CTGTTTTGTCCTAGCGAAGCTCCTGGTTTACAAGATGTGTGGGGTGACGAATTCGAGGCG 229518 Query 112218 CTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTG 112277 || | ||| || || ||| | || || | ||| | ||| | || Sbjct 229519 CTTTTTGAAAAATATGAACGGGAAGGCCGCGCACGTCAAACGATCAAGGCTCAAAAGCTG 229578 Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||| | || ||| | | ||||||| || ||||| | || | ||||||||||| || Sbjct 229579 TGGTATGCCATTTTGGAAGCTCAAACTGAAACTGGGAACCCCTTCATGCTTTACAAGGAT 229638 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 || ||||||| ||| ||||||| | || |||| ||||| | |||||| ||| Sbjct 229639 GCATGTAACCGCAAGTCTAATCAACAAAACCTGGGAACTATCAAATGCAGCAACCTGTGT 229698 Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 112457 || ||||| | |||| | | ||||| || || ||||| ||||| ||| Sbjct 229699 ACCGAAATTGTCGAATACTCTAGCCCTGATGAAGTCGCCGTCTGTAATCTCGCCAGTATC 229758 Query 112458 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT-TGATTATGAAAAACTCCACGA 112516 ||||| || |||||||| || | || | | ||| ||| | | || || | | Sbjct 229759 GCTCTGCCTTCGTATGTGG-TCAACAGGGA---ATATTATGACTTCAAGAAGCTGTATCA 229814 Query 112517 AGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT 112576 ||| || ||| |||| || || | |||| | || || | |||| |||||| || Sbjct 229815 AGTCACCAAAGTCATCACCAAGAATTTGAACAAGATCATCGACATCAATTATTACCCTGT 229874 Query 112577 TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCT 112636 | | ||| ||| || | | || || || |||||||||||||||||||| | Sbjct 229875 GGTGGAAGCTGAACGATCCAACAAACGCCATCGCCCCATTGGTCTCGGTGTCCAAGGCTT 229934 Query 112637 CGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA 112696 || |||| ||||| || ||| || | ||||| ||||| || || || || |||| Sbjct 229935 GGCTGATGCCTTCATGCTCATGCGCTACCCCTTTGAATCCGAGGAGGCCAAAAAACTCAA 229994 Query 112697 TGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGA 112756 | || ||||| || || || | || ||| | || ||| | || ||||| | Sbjct 229995 CCAACAGATCTTTGAAACCATCTACTATGCAGCTTTGGAAGCGTCATGCGAATTGGCTCA 230054 Query 112757 GGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAAT 112815 || ||| | |||||||| | | || ||| | || |||||| || |||| Sbjct 230055 ACAAGACGGTGCTTATGAAACATACCAAGGCAGTCCTGTCTC-CAAGGGCAACCTCCAAT 230113 Query 112816 TTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGACGCTCTCAAGGAACGC 112874 || ||||||| || | ||| | | || | ||||||| |||| | || | Sbjct 230114 ACGACATGTGGG-GTGTCACACCTACCGATCTTTGGGACTGGGCCGCTTTGAAAGCCAAG 230172 Query 112875 ATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACC 112934 |||| | | ||| | || ||| || | | ||||| ||||| ||||| |||||| Sbjct 230173 ATCAGCCAACACGGTGTCCGCAACTCCCTGCTTGTTGCACCTATGCCCACAGCTTCCACC 230232 Query 112935 GCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGA 112994 | |||||| | || || |||||||| ||||| ||||| | ||| |||| | Sbjct 230233 TCGCAAATCCTCGGCTTCAACGAATGCTTCGAACCTTACACCTCCAACCTCTACACCCGT 230292 Query 112995 AGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAG 113054 | |||||| || || || || |||||| ||| | | ||| | || Sbjct 230293 CGTGTCCTCGCTGGTGAATTCCAAATCGTCAACCCTTGGCTCCTCAAAGACTTGGTCGAA 230352 Query 113055 ATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAA 113114 | || ||||| | | || || ||| | | ||| || | |||| || | || Sbjct 230353 CTCGGCATCTGGAACGAAGACATCAAGAACCGCATCATGTCTGACAGTGGCTCGGTACAG 230412 Query 113115 AATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAG 113174 || || | | || || ||| | | || ||||| || || ||||||||| | Sbjct 230413 AACATCCAGAACATCCCGGATCATCTCAAAGCAATGTACAAGACGGTATGGGAAATCTCG 230472 Query 113175 ATGAAGGA-TGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAG 113233 | | | ||||||| |||||||| ||||| || ||| || || ||||||||||| Sbjct 230473 -CAACGCACACTCATTGATATGGCCGCTGATCGGGGGGCCTTTATCGACCAAAGTCAAAG 230531 Query 113234 TATGAATCTATTCATGGAAAGTCC--AACGATGTCCAAGCTCTCTTCTATGCACATGTAC 113291 ||||| | ||||| | |||| ||| || |||||| | ||||||| | || Sbjct 230532 CTTGAATATCTTCATCG-GTGTCCCTAACTTTG-GCAAGCTGACCAGTATGCACTTTTAT 230589 Query 113292 AGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 113332 | ||||| ||||| ||||| || || |||||||||||||| Sbjct 230590 GGATGGAAAAAGGGGCTCAAGACCGGCATGTATTACCTCCG 230630 >seq2275 Length=1761326 Score = 120 bits (132), Expect = 4e-22 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 |||||||| || ||||| |||| ||||| |||||| |||||||||||||||||| | Sbjct 1159778 TCCTTTGCCGAACGACTTGTCGCCTTTGCTGCTGTTGAAGGTATCTTCTTCTCTGGTGCA 1159719 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 ||| | |||| | ||||||||||||||| ||| | ||||| || | |||||||||| Sbjct 1159718 TTCGCCTCTATCTTTTGGCTCAAGAAGCGTGGTTTGATGCCTGGCTTGACCTTCTCCAAC 1159659 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 || || ||| || ||||| || || ||| || ||||| Sbjct 1159658 GAACTGATCAGCCGAGACGAAGGCCTTCACACCGACTTTGC 1159618 >seq3304 Length=726533 Score = 105 bits (116), Expect = 8e-18 Identities = 376/577 (65%), Gaps = 28/577 (5%) Strand=Plus/Minus Query 112425 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 112484 ||||| ||||||||||||||| || || ||||||| |||||||| || || | Sbjct 124307 GATGAAGTGGCTGTGTGTAACCTGGCCTCTGTCGCTCTTCCCAAGTACGTCGACACCACC 124248 Query 112485 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTA 112544 || || || ||||||| |||||| |||| | |||| || ||| | | ||||| Sbjct 124247 ACCAACACCTTTGATTTTGAAAAGCTCCGCACAGTTGTCAAGGTCGTCGCCACCAACCTC 124188 Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGA 112604 |||| || || ||| || | ||||| || || || ||| | || ||| | Sbjct 124187 AACAAGGTGATCGATGTCAACTACTACCCTGTGGAACAAGCCCGTCGAAGCAACATGCGT 124128 Query 112605 CACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 112664 || ||||| | ||||||||||| ||||||||||| |||| || | || || | | Sbjct 124127 CATCGTCCCGTAGGTCTCGGTGTTCAAGGTCTCGCTGATGCCTTTTTGCTCCTCCGACTC 124068 Query 112665 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCAC 112724 | || || ||| ||||| || |||| | || ||||| || || || Sbjct 124067 CCCTTCGAATCCCCTGAAGCACGCCAACTCAACAAGGACATCTTTGAAACGATCTACTTT 124008 Query 112725 GCCGCTCTTGAGGCGAGTTCG---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTT 112781 ||||| || || || |||| || ||||| ||| |||| || |||||||||| Sbjct 124007 GCCGCCCTGGAAGC---TTCGTGTGAATTGGCCGAGAAGAATGGCCCGTATGAAACCTAC 123951 Query 112782 GAGGGTTCTCCAGCTTCA--CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA 112839 || || |||||| ||| ||||| | | || |||||||| |||||||| || | Sbjct 123950 GAAGGCTCTCCA--ATCAGTCAAGGCATCTTACAGCATGATATGT-GGAAGGTG-GA--A 123897 Query 112840 AGCTTC--AC--TACGACTGGGACGCTCT-----CAAGGAACGCATCAAGGAGAAGGGTC 112890 ||| | || | || ||||| | ||| | | || || || || | ||| Sbjct 123896 GGCTCCGAACGATGGGATTGGGATGGTCTACGTGCGAAGATTGC--CA---AGCATGGTG 123842 Query 112891 TTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 112950 | | ||| ||| ||| | || || |||||||| ||| ||| || ||| | || | Sbjct 123841 TCAGAAACTCTCTCTTGGTCGCCCCCATGCCAACCGCCAGTACCAGTCAGATCCTTGGCA 123782 Query 112951 ATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 | |||||||| || ||||| || || | || ||||| Sbjct 123781 ACAATGAATGTTTCGAACCTTATACAAGCAATATCTA 123745 Score = 87.8 bits (96), Expect = 2e-12 Identities = 176/256 (69%), Gaps = 4/256 (2%) Strand=Plus/Minus Query 111515 CATTGACACGAAGAGAGACTACGACTTTGGTTATTTTGGTCTCAAGACCCTCGAGAAAAG 111574 ||||||| | ||||| || |||||| | |||||| ||||||| | || || Sbjct 125406 CATTGACTACACCAGAGATTATGACTTTAACTTTTTTGGCTTCAAGACGTTGGAACGCAG 125347 Query 111575 CTACCTC-CAAAGACTGGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGGG 111633 ||| || ||||| ||||| | | | ||||| || || | ||| ||||||| | Sbjct 125346 CTATCTGTCAAAGG-TGGATAATCGCATTGTGGAACGACCTCAACATATGATCATGCGTG 125288 Query 111634 TCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGACAAGATGT 111693 | || | || |||||||| | ||||||||| ||| | | || |||||| |||| Sbjct 125287 TGGCTTTGGGGATCCATGGCAAGGATATTGATGCTGCCATCCAAACCTACGACCTTATGT 125228 Query 111694 CCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCC 111752 ||| ||| |||| ||| || || || || |||||||| ||||||||||| | || Sbjct 125227 CCCTCAAGTAC-TTCACCCATGCTACCCCCACTCTCTTCAATGCTGGTACACCTCGCCCT 125169 Query 111753 CAAATGTCCAGTTGTT 111768 ||| | ||||| |||| Sbjct 125168 CAACTATCCAGCTGTT 125153 >seq319 Length=278629 Score = 104 bits (114), Expect = 3e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 |||||||||||||| || |||| ||||| || || |||||||||||||| ||| || Sbjct 176603 TCCTTTGCTGAGCGTCTTGTCGCCTTTGCTGCCGTGGAAGGTATCTTCTTCTCGGGTGCC 176544 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 || | | || | |||||||||||| || || || ||||| ||| | |||||||||| Sbjct 176543 TTTGCCTCCATCTTTTGGCTCAAGAAACGTGGCCTGATGCCTGGTTTGACCTTCTCCAAC 176484 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || || ||| | ||||| || |||||| Sbjct 176483 GAACTCATCAGCAGAGACGAAGGCCTCCAC 176454 >seq2869 Length=18354 Score = 95.1 bits (104), Expect = 2e-14 Identities = 260/396 (66%), Gaps = 2/396 (1%) Strand=Plus/Minus Query 13597 TCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGG 13656 |||| ||||| || | || || ||| || || || |||| | || ||||| || Sbjct 10280 TCTACCAAGCGTCGACCTCTGAACTGTACGGCAAAGTAGTGGAGACCCCCCAAAAGGAAA 10221 Query 13657 AGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCG 13716 || ||||||||||| ||||| || || || | ||| | | | ||| ||| Sbjct 10220 CCACCCCCTTCTACCCCCGCTCTCCATATGGTGTGGCCAAGCTCTATGGTTACTGGATCG 10161 Query 13717 TAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAACCATG 13776 | ||| || || || |||||| ||| ||| || ||| |||||||||||||||| Sbjct 10160 TCGTGAACTATCGTGAATCTTACAACATGTATGCCTGTAACGGTATCCTCTTCAACCATG 10101 Query 13777 AATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTACCGAGGGTATCAAACAAA 13836 |||| || | || || |||||| ||| ||||| | | | | | | Sbjct 10100 AATCCCCTCGTCGTGGCCGTACCTTTGTCACCCGCAAGATCTCTCGTGCTGTGGCGGATA 10041 Query 13837 TC-ATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAGATTGG 13895 || || || | ||| ||| | || | | || ||||| | || || | |||||| Sbjct 10040 TCCATCTCGGTCGTCAAG-AGTGCCTTTATCTCGGCAACATCGATGCCAAGCGTGATTGG 9982 Query 13896 GGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCGAC 13955 ||||| || ||||||||| |||| ||||||||| ||| | |||||||| || | ||| Sbjct 9981 GGTCATGCTCGGGACTATGTGGAAGGTATGTGGCTGATGTTGCAACAAGATCAACCTGAC 9922 Query 13956 GAATATGTAGTAGCAACGGGTGAGACCCATTCAGTG 13991 || | ||| | || || ||||| |||||| | ||| Sbjct 9921 GACTTTGTCTTGGCTACCGGTGAAACCCATACTGTG 9886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620700980963360