Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1090 205 1e-47 seq2275 98.7 1e-15 seq3304 91.5 2e-13 >seq1090 Length=283134 Score = 205 bits (226), Expect = 1e-47 Identities = 1103/1731 (64%), Gaps = 50/1731 (3%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| || ||||| ||||||||||| || | |||||| | || | |||||| | Sbjct 230630 CGGAGGTAATACATGCCGGTCTTGAGCCCCTTTTTCCATCCATAAAAGTGCATACTGGTC 230571 Query 105650 AGCTTGGACATCGTT--GGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGA 105707 |||||| || ||| |||| | ||||| | ||||| |||||||| ||||| || | Sbjct 230570 AGCTTGC-CAAAGTTAGGGACAC-CGATGAAGATATTCAAGCTTTGACTTTGGTCGATAA 230513 Query 105708 AGCGACCACGTTGTGCCGCCATATCAATGACA-TCCTTCATCTTGATTTCCCACACTGTG 105766 || || || | || ||||||||||||| | | | | ||||||||| || || Sbjct 230512 AGGCCCCCCGATCAGCGGCCATATCAATGAGTGTGCGTTG-CGAGATTTCCCATACCGTC 230454 Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATAT-CTGAGATATTTTGAATTGAACCCC---C 105822 ||| | |||| || ||| ||||| | ||| ||| || || | || || | | Sbjct 230453 TTGTACATTGCTTTGAGATGATCCGGGATGTTCTG-GATGTTCTGTACCGAGCCACTGTC 230395 Query 105823 CGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATT 105882 | | ||| || | | ||| || || | | ||| | || | | | || || Sbjct 230394 AGACATGA---TGCGGTTCTTGATGTCTTCGTTCCAGATGCCGAGTTCGACCAAGTCTTT 230338 Query 105883 GACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTT 105942 || ||| |||||| || || || || |||||| | | |||| ||| Sbjct 230337 GAGGAGCCAAGGGTTGACGATTTGGAATTCACCAGCGAGGACACGACGGGTGTAGAGGTT 230278 Query 105943 CGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGG 106002 | ||||| ||||| |||||||| || || | |||||| | |||||| ||||| || Sbjct 230277 GGAGGTGTAAGGTTCGAAGCATTCGTTGAAGCCGAGGATTTGCGAGGTGGAAGCTGTGGG 230218 Query 106003 CATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAAC 106062 ||| ||||| | | || ||| || | ||| | || |||| | || | | | Sbjct 230217 CATAGGTGCAACAAGCAGGGAGTTGCGGACACCGTGTTGGCTGATCTTGGCTTTCAAAGC 230158 Query 106063 ATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTGAAGCAC-CCC 106119 ||||||| | || | | ||| | || ||||||| || |||| || ||| Sbjct 230157 GGCCCAGTCCCAAA-GATCGGTAGGTGTGACAC-CCCACATGTCGTATTGGAGGTTGCCC 230100 Query 106120 TTGG-GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCAC 106178 |||| ||| ||| || | |||| ||||| | ||| | || ||||||||| | Sbjct 230099 TTGGAGACA--GGACTGCCTTGGTATGTTTCATAAGCACCGTCTTGTTGAGCCAATTCGC 230042 Query 106179 AGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGG 106238 | ||| |||| | ||| | || |||||||||||||| | || | | |||| Sbjct 230041 ATGACGCTTCCAAAGCTGCATAGTAGATGGTTTCAAAGATCTGTTGGTTGAGTTTTTTGG 229982 Query 106239 CTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACAC 106298 | || || || ||||| | |||||| | || || |||| || | ||||| |||| Sbjct 229981 CCTCCTCGGATTCAAAGGGGTAGCGCATGAGCATGAAGGCATCAGCCAAGCCTTGGACAC 229922 Query 106299 CCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAA 106357 | | |||||| || | || || | || || | ||| || | | || || ||| || Sbjct 229921 CGAGACCAATGGGGCGATGGCGTTTGTTGGATCGTTCA-GCTTCCACCACAGGGTAATAA 229863 Query 106358 TTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTT 106417 || |||| |||| ||| | ||| ||||| | | || |||| || || || || Sbjct 229862 TTGATGTCGATGATCTTGTTCAAATTCTTGGTGATGACTTTGGTGACTTGATACAGCTTC 229803 Query 106418 TCATAATCAAAAGTGCGAGTCTCTTCATTGAC---ATACTTTGGAAGGGCGATTGATGCC 106474 | | ||| || | || || ||||| |||| || || ||||| || Sbjct 229802 TTGAAGTCATAAT----ATTCCCTG--TTGACCACATACGAAGGCAGAGCGATACTGGCG 229749 Query 106475 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTG 106534 | ||| || || || ||||| | ||| || | |||||| ||||||| |||| Sbjct 229748 AGATTACAGACGGCGACTTCATCAGGGCTAGAGTATTCGACAATTTCGGTACACAGGTTG 229689 Query 106535 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAG 106594 | || || || |||| || | ||| ||| ||| ||| || ||||||||||| Sbjct 229688 CTGCATTTGATAGTTCCCAGGTTTTGTTGATTAGACTTGCGGTTACATGCATCCTTGTAA 229629 Query 106595 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGC 106653 |||||| |||| |||| || || || || | | | ||| || | ||||| | | | Sbjct 229628 AGCATGAAGGGGTTCCCAGTTTCAGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTGA 229569 Query 106654 GGCTGGTACAATGG-CGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 106712 | || | | | | ||| || || || ||| || || ||| | || || || | Sbjct 229568 GCCTTGATCGTTTGACGT--GCGCGGCCTTCCCGTTCATATTTTTCAAAAAGCGCCTCGA 229511 Query 106713 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATT 106772 | || |||||| | | || | ||| || || | | ||||| || || ||||||| Sbjct 229510 ATTCGTCACCCCACACATCTTGTAAACCAGGAGCTTCGCTAGGACAAAACAGGGACCATT 229451 Query 106773 GACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 106832 |||| | || || ||||||||||| || || || ||||| || | | ||||||| Sbjct 229450 CACCATTGGCTTCCACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCATAGAAGAGAT 229391 Query 106833 CTCTACACCGAG---CCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGA 106889 | | | ||| | |||| | | | | ||| || | || | || | || Sbjct 229390 CACGAGCCCGGATTTCGTCTTTGCCGACATTCTTG---CGGAGATCCAAAAAGGTGAAGA 229334 Query 106890 TATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCT 106945 ||| || ||||| || |||||||| | |||| || || | || | ||| | || Sbjct 229333 CATCAGCATGCCAAGGTTCAAGATACATGGCGAAAGCACCAGGTCGTTTGTTGCC-ACCT 229275 Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005 |||| ||||| || || ||| ||| || || || ||||| |||| |||||||| || Sbjct 229274 TGATCCACATAACGAGCAGTGTTGTTGAAGACACGGAGCATAGGAAGAATACCATTGGAG 229215 Query 107006 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 107065 | || ||||| || ||| || | |||| | | | ||||||| | ||| Sbjct 229214 TAGCCGTTTGTACCAGCAATGTAGGAGCCAGTGGCACGGATGTTGTGGATGTTGAGCCCG 229155 Query 107066 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 107125 || || || || ||||||||||||||||| || | || ||| | ||||| || | Sbjct 229154 ATCCCGCCTGCGGTTTTTGAGATTTGCGCACAGACCTTCAGTGTTTCGTAGATGCCTTCA 229095 Query 107126 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 107185 || ||||| ||||| ||| || | ||||||| ||| | ||| || | || ||||| Sbjct 229094 ATGGAGTCTTCCTTCATGGTGAGCAAGAAGCAAGAGGAGAGCTGAGGACGAGGAGTACCG 229035 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTTGGGACATCTTGTCGTATGT 107244 |||||||| | |||||| | ||||| |||| ||| || ||||| | ||| || Sbjct 229034 GCATTGAATAAGGTTGGACTGGCGTGGGTGAA-GTACTTTTCCGACATGAGATTGTAGGT 228976 Query 107245 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || | | || || || ||||| || || || || | |||||||||||| Sbjct 228975 TTCGATAGCCGAGTCGATATCTTCGCCATGAATACCCACGGCCACACGCAT 228925 >seq2275 Length=1761326 Score = 98.7 bits (108), Expect = 1e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| || || || |||||| || ||||| || |||||| | ||| Sbjct 1159617 GGCAAAGTCGGTGTGAAGGCCTTCGTCTCGGCTGATCAGTTCGTTGGAGAAGGTCAAGCC 1159676 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| | ||| |||||||| | |||| | |||| | ||||| || ||||||||||| Sbjct 1159677 AGGCATCAAACCACGCTTCTTGAGCCAAAAGATAGAGGCGAATGCACCAGAGAAGAAGAT 1159736 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 ||| || ||| ||||| || | ||| || ||||| ||||| Sbjct 1159737 ACCTTCAACAGCAGCAAAGGCGACAAGTCGTTCGGCAAAGGA 1159778 >seq3304 Length=726533 Score = 91.5 bits (100), Expect = 2e-13 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 105587 GATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAA 105646 ||||| | |||||||||||||||||||||||| | |||||| || || | ||||| || Sbjct 123335 GATCGTAAATAGTACATCCCGGTCTTGAGTCCCTTTTTCCAAGCATAGAAGTGCATTGAG 123394 Query 105647 GAGAGCTTGGACATCGTTGGACTTTCC-ATGAAAAGATTCATACTTTGACTCTGGTCAAT 105705 | |||||| | | | | | | | || |||| |||||||| ||| ||||| || Sbjct 123395 GTGAGCTT-GCCGTAGGTAGGTTCGCCTGTGAAGAGATTCATGGATTGCGATTGGTCGAT 123453 Query 105706 GAAGCGACCACGTTGTGCCGCCATATCAATGA-CATCCTTCATCTTGATTTCCCACACTG 105764 ||| | |||| | || ||||| || |||| | || | | ||||||||| |||| Sbjct 123454 AAAGGCAGCACGGTCGGCGGCCATGTCGATGATGACCCGTTGT-GAGATTTCCCAGACTG 123512 Query 105765 TGCGGTAGAGATTCTTGATATCATCTGGGAT 105795 | |||||| ||||| |||||| ||||| Sbjct 123513 TCTTGTAGAGTGCCTTGAGATCATCAGGGAT 123543 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/189 (71%), Gaps = 5/189 (3%) Strand=Plus/Plus Query 107131 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 107190 ||||| | ||||| ||| | | || ||||| | || || | |||||||||||||| Sbjct 125133 GTCCTGCATGTTGACGAGAT---AACAGCTGGATAGTTGAGGGCGAGGTGTACCAGCATT 125189 Query 107191 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTCTCCA 107249 |||||| || || || || || |||| ||| | ||||||| |||||| || | | Sbjct 125190 GAAGAGAGTGGGGGTAGCATGGGTGAAG-TACTTGAGGGACATAAGGTCGTAGGTTTGGA 125248 Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309 | ||| |||||| || | || ||||| || | ||||||||||| | ||| | ||| | Sbjct 125249 TGGCAGCATCAATATCCTTGCCATGGATCCCCAAAGCCACACGCATGATCATATGTTGAG 125308 Query 107310 GTGTTTCCA 107318 || ||||| Sbjct 125309 GTCGTTCCA 125317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589941433531120