Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq236 187 6e-42 seq3256 179 8e-40 seq3208 165 2e-35 seq1528 145 2e-29 seq2275 131 4e-25 seq304 131 4e-25 seq197 98.7 2e-15 >seq236 Length=318481 Score = 187 bits (206), Expect = 6e-42 Identities = 163/203 (80%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||||||||| || |||||||| |||||||| | || || | |||||||| || || Sbjct 112589 TGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGTTGT 112648 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || ||||| || |||||||||||||||||||| ||||| ||||||||||| ||| Sbjct 112649 TTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTT 112708 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 |||||||| || || |||| ||| || ||||||||||||||| | ||||| ||||| Sbjct 112709 TGCTTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTGCCTGTA 112768 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | |||||| Sbjct 112769 AGCGTCTTGACGAAGATTTGCAT 112791 Score = 170 bits (188), Expect = 4e-37 Identities = 160/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||||| |||||||| || ||||| || | || || | |||||||| || || Sbjct 111776 GTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCCAGTTG 111835 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||||| || |||||||| |||||||| || ||||| ||||||||||| |||||||| || Sbjct 111836 TTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCTTGAATCTT 111895 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| || || | ||| || ||||||||||||||| | ||||| || || Sbjct 111896 TTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTGCCAGT 111955 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || || || | |||||| Sbjct 111956 CAGGGTCTTGACAAAGATTTGCAT 111979 Score = 152 bits (168), Expect = 1e-31 Identities = 138/174 (79%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||||| |||||||| || ||||| || | || || | |||||||| || || Sbjct 112004 GTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCTTCCAGTTG 112063 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || || Sbjct 112064 TTTACCAGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCTTGGATCTT 112123 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||||||||| || || | ||| || ||||||||||||||| | ||||| Sbjct 112124 TTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATGGTCTT 112177 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 195033 AATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCAC 195092 |||||||||||| ||||| ||||||||||||||||| || || | ||| || |||||| Sbjct 112456 AATGCCTTCTTTATCTTGGATTTTTTGCTTGACGTTGTCGATCGAGTCAGAGGATTCCAC 112515 Query 195093 TTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | || | ||||| || |||| || || ||||| | |||||| Sbjct 112516 TTCCAAAGTGATTGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 112563 >seq3256 Length=796958 Score = 179 bits (198), Expect = 8e-40 Identities = 165/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || |||||||| || || |||||||| ||||| || | |||||| | |||||||| Sbjct 723382 ACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 723323 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||||| || |||||||| |||||||| |||||||| || || ||||| || |||||| Sbjct 723322 AATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTTATCTTGA 723263 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || |||||||||||||| || |||| ||| ||| ||| ||||| || || | ||||| Sbjct 723262 ATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTG 723203 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | |||||| Sbjct 723202 CCAGTCAAGGTCTTGACGAAGATTTGCAT 723174 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| ||||||||||| || || ||||| || ||||| || | || || | |||||||| Sbjct 724067 AACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTC 724008 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || || || || |||||||| | |||||||||||||| || || ||||| |||||||| Sbjct 724007 CAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTG 723948 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || |||||||| ||||| || || | ||| || ||||||||||||||| | || || Sbjct 723947 GATCTTTTGCTTCACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTTTT 723888 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | |||||| Sbjct 723887 ACCAGTCAGGGTCTTGACGAAGATTTGCAT 723858 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 |||||||| || || ||||| || ||||| || | || || | |||||||| || || Sbjct 723604 TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTCCAGTTGT 723545 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | |||||||||||||| || || ||||| |||||||| || ||| Sbjct 723544 TTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTGGATCTTT 723485 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||||| || || | ||| || ||||||||| | ||||| ||||| || ||| Sbjct 723484 TGCTTGACGTTATCGATAGAGTCGGAGGATTCCACTTCCAAGGTAATGGTCTTGCCAGTC 723425 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 || || || || || | |||||| Sbjct 723424 AAGGTCTTGACAAAGATTTGCAT 723402 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||||||||| || |||||||| || ||||| || | || || | |||||||| Sbjct 724295 AACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCCATCTTC 724236 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | || ||||| |||||||| | |||||||||||||| || || ||||| |||||||| Sbjct 724235 CAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTG 724176 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || |||||||| || || || || | |||||| ||||||||| || || | ||||| Sbjct 724175 GATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGATTGTCTT 724116 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | |||||| Sbjct 724115 ACCAGTCAAGGTCTTCACAAAGATTTGCAT 724086 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||| || |||||||| || ||||| || | | ||| | ||||||||| Sbjct 724522 ACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAAAGTACGACCATCTTCG 724463 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| | ||||| |||||||| || || ||||| |||||||| Sbjct 724462 AGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGG 724403 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || |||||||||||||| || || | ||| || ||||||||| | |||| ||||| Sbjct 724402 ATCTTTTGCTTGACGTTATCGATAGAGTCAGAGGATTCCACTTCCAAAGTAATAGTCTTG 724343 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || || || | |||||| Sbjct 724342 CCAGTCAGGGTCTTGACAAAGATTTGCAT 724314 >seq3208 Length=262556 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || || || ||||| || |||||||| | ||||| | |||||||| || || Sbjct 83860 GTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCTAGTTG 83919 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || ||||| ||||| || ||||| ||||| ||||| ||||||||||| |||||||| || Sbjct 83920 TTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCTTGAATCTT 83979 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| || || | ||| || ||||||||| || || | ||||| || || Sbjct 83980 TTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTGATAGTCTTGCCAGT 84039 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 |||||| || ||||| | ||||| Sbjct 84040 CAAAGTCTTGACGAAGATCTGCAT 84063 >seq1528 Length=6275 Score = 145 bits (160), Expect = 2e-29 Identities = 122/150 (81%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||||||||| || ||||| || ||||| |||| | ||| | ||||||||||| || Sbjct 4511 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTGCGACCATCTTCGAGTTG 4452 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||||||||| ||||| || || |||||||| ||||| |||||||| || || Sbjct 4451 CTTGCCAGCGAAGATAAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGGATCTT 4392 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT 195086 ||||||||| || || |||| ||| || || Sbjct 4391 TTGCTTGACATTGTCGATGGAGTCGGAGCT 4362 >seq2275 Length=1761326 Score = 131 bits (144), Expect = 4e-25 Identities = 119/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||||||||| || |||||||| ||||| || | | ||| | || |||||||| || Sbjct 759228 GTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCGTCTTCGAGTTG 759287 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || |||||||| ||||| || || ||||| || ||||| |||||||| || || Sbjct 759288 CTTGCCAGCAAAGATAAGACGTTGCTGATCAGGAGGGATACCTTCCTTGTCTTGGATCTT 759347 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT 195086 |||||||||||| || || | ||| || || Sbjct 759348 TTGCTTGACGTTGTCGATAGAGTCGGAGCT 759377 >seq304 Length=62727 Score = 131 bits (144), Expect = 4e-25 Identities = 119/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || |||||||| || ||||| || ||||| |||| | || | ||||||||||| ||| Sbjct 38847 TGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAACGTACGGCCATCTTCGAGTTGC 38906 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || |||||||| ||||| || || |||||||| ||||| ||||||||||| ||| Sbjct 38907 TTGCCGGCAAAGATAAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTT 38966 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTT 195087 |||||||| || || || | ||| || ||| Sbjct 38967 TGCTTGACATTGTCGATCGAGTCAGAGCTT 38996 >seq197 Length=169696 Score = 98.7 bits (108), Expect = 2e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| ||||| || ||||| || ||||| || | ||||| | |||||||| | ||| Sbjct 118638 TGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCCAATTGC 118579 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || ||||| | ||||| || || || || || ||||| || ||||| || ||| Sbjct 118578 TTTCCAGCAAAGATCAAACGTTGCTGATCAGGGGGGATACCTTCCTTATCTTGGATCTTT 118519 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACT 195086 |||||||| || || || | ||| || || Sbjct 118518 TGCTTGACATTGTCGATCGAGTCGGAGCT 118490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109405719086246