Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3256 100 2e-16 seq3208 82.4 5e-11 >seq3256 Length=796958 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || |||||||| ||||| ||||| | || |||| |||| || || ||||| || Sbjct 723365 TTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAATTGCTTGCCGGCGAA 723306 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || ||||||||||||||| | || | || ||||| || |||||| || |||||| Sbjct 723305 GATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTTATCTTGAATCTTTTGCTTGACGTT 723246 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || || || | ||||| |||| || ||||| || || || | ||||| || Sbjct 723245 GTCGATGGAGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGAC 723186 Query 34970 AAAGATCTGCATATT 34984 ||||| ||||| || Sbjct 723185 GAAGATTTGCATGTT 723171 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||| || ||||| ||||| || | | || |||| || ||||| || |||||||| Sbjct 724505 TTCTTTTTGGATGTTGTAGTCAGACAAAGTACGACCATCTTCGAGCTGCTTCCCGGCAAA 724446 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | |||||||||||| | || | || |||||||| ||||| || |||||| Sbjct 724445 GATCAAACGTTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGGATCTTTTGCTTGACGTT 724386 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || || ||| || || || || | || || || || || || || ||||| || Sbjct 724385 ATCGATAGAGTCAGAGGATTCCACTTCCAAAGTAATAGTCTTGCCAGTCAGGGTCTTGAC 724326 Query 34970 AAAGATCTGCATA 34982 |||||| |||||| Sbjct 724325 AAAGATTTGCATA 724313 Score = 84.2 bits (92), Expect = 1e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || ||| || || ||||| ||||| || || | || |||| || Sbjct 723839 AACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTC 723780 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||| ||||| || || || || | |||||||| || | || | || |||||||| Sbjct 723779 CAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGGGGGATACCTTCCTTGTCTTG 723720 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| || || || | || || ||| || || || || | || || || || Sbjct 723719 GATCTTTTGCTTCACATTGTCGATAGAGTCAGAGGATTCCACTTCCAGAGTGATTGTCTT 723660 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | |||||| |||||||| |||||| Sbjct 723659 GCCAGTCAAAGTCTTGACAAAGATTTGCATA 723629 Score = 84.2 bits (92), Expect = 1e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || |||||| || ||||| ||||| || || | || |||| || Sbjct 724295 AACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCCATCTTC 724236 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||||| || || || || | ||||| |||||| | || | || |||||||| Sbjct 724235 CAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTG 724176 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| || || || | || || || || || || || | || || || || Sbjct 724175 GATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGATTGTCTT 724116 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | |||||||||||||| |||||| Sbjct 724115 ACCAGTCAAGGTCTTCACAAAGATTTGCATA 724085 >seq3208 Length=262556 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || ||| || || ||||| || || || || | || |||| || Sbjct 83855 ACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCT 83914 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||| || ||||| || || ||||||||||| | || | || || || || | Sbjct 83915 AGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCTTGA 83974 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || |||||| | || || || || || || || | || || || || Sbjct 83975 ATCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTGATAGTCTTG 84034 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | |||||| || |||||||||||| Sbjct 84035 CCAGTCAAAGTCTTGACGAAGATCTGCATA 84064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324612480352464