Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq236 161 8e-35 seq3208 158 1e-33 seq3256 156 3e-33 seq197 122 7e-23 >seq236 Length=318481 Score = 161 bits (178), Expect = 8e-35 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || ||||| ||||||||||| || ||||| || | || || | | |||| ||| Sbjct 111771 ACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCC 111830 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| ||||| ||||| || | ||| |||||||| || || |||||||||||||||||| Sbjct 111831 AGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCTTGA 111890 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||||| || || | || | || |||||| | |||||||||||| |||| || ||| Sbjct 111891 ATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTG 111950 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || ||||| || ||||| Sbjct 111951 CCAGTCAGGGTCTTGACAAAGATTTGCAT 111979 Score = 152 bits (168), Expect = 4e-32 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| |||||||| || ||||| ||||| || |||||||| | || || | | | Sbjct 112576 ACGGAGAACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCC 112635 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||| ||| || || ||||| || | ||| ||||| || || ||||| ||||| || Sbjct 112636 ATCTTCCAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTT 112695 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 |||||||| ||||| || ||| | || | | |||||| | |||||||||||| |||| Sbjct 112696 GTCTTGAATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGTGAT 112755 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || ||||| || | || || || || || |||||||| Sbjct 112756 TGTCTTGCCTGTAAGCGTCTTGACGAAGATTTGCATGGT 112794 Score = 140 bits (154), Expect = 3e-28 Identities = 139/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || ||||| ||||||||||| || ||||| || | || || | | |||| ||| Sbjct 111999 ACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCTTCC 112058 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| ||||| ||||| || | ||| |||||||| || || ||||||||||||||||| Sbjct 112059 AGTTGTTTACCAGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCTTGG 112118 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||||| || || | || | || |||||| | |||||||||||| |||| || ||| Sbjct 112119 ATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATGGTCTTG 112178 >seq3208 Length=262556 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| |||||| | || || || ||||| ||||| ||||| || |||||||| | | Sbjct 83837 CCACCTCGTAAACGGAGCACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAG 83896 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| || | ||| || |||||||| || | || || || || || || Sbjct 83897 AGAGTGCGACCATCTTCTAGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGG 83956 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||||||||||||||| ||||| || || | || | || ||| || | ||||||| Sbjct 83957 ATGCCTTCTTTATCTTGAATCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACT 84016 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||||| || ||||| || ||||| || || || |||||||| Sbjct 84017 TCCAGAGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 84063 Score = 138 bits (152), Expect = 9e-28 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| || ||||| ||||| || ||||| |||| || || | | |||| || | || Sbjct 84088 ATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTG 84147 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || ||||| || | |||||||| ||||| || |||||||| |||||||| || || Sbjct 84148 TTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTATCTTGGATCTT 84207 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 |||||| || | || | | |||||| | ||||||||| | || | || ||||| || Sbjct 84208 TTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCACTTCCAATGTAATGGTCTTGCCAGT 84267 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | |||||||||||| || ||||| Sbjct 84268 AAGAGTTTTTACAAAGATTTGCAT 84291 >seq3256 Length=796958 Score = 156 bits (172), Expect = 3e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || ||||| |||||||||||||| || ||||| || | || || | | | Sbjct 724301 ACGGAGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCC 724242 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||||||| ||||| || || |||||||| ||||| || || || || ||||| || Sbjct 724241 ATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTT 724182 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || ||||| || ||| | || | || ||| || | ||||||||| ||||||| Sbjct 724181 GTCTTGGATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGAT 724122 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || || || || ||||| || ||||| Sbjct 724121 TGTCTTACCAGTCAAGGTCTTCACAAAGATTTGCAT 724086 Score = 127 bits (140), Expect = 2e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| |||||||| ||||| || ||||| || | | ||| | | |||| |||||||| Sbjct 723377 ATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAATTG 723318 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || || | || || || || || || || ||||| ||||||||||| || Sbjct 723317 CTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTTATCTTGAATCTT 723258 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| || || | || | | ||| || | ||| ||||| ||||||| || ||||| || Sbjct 723257 TTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTGCCAGT 723198 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 || || || || || || |||||| Sbjct 723197 CAAGGTCTTGACGAAGATTTGCATG 723173 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | ||||| |||||||| ||||| || ||||| || | || || | | Sbjct 724073 ACGGAGAACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACC 724014 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||| ||| || || || || ||||| || ||||| || || || || ||||| || Sbjct 724013 ATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATTCCTTCCTT 723954 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || ||||| || || | || | || |||||| | |||||||||||| |||| Sbjct 723953 GTCTTGGATCTTTTGCTTCACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGAT 723894 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || | || || || || || ||||| Sbjct 723893 TGTTTTACCAGTCAGGGTCTTGACGAAGATTTGCAT 723858 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||||| || | ||| || |||||||||||||| || ||||| || | | ||| | | Sbjct 724529 ACGTAGGACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAAAGTACGACC 724470 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||||| || ||||| |||||||| || || || || || || ||||| || Sbjct 724469 ATCTTCGAGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGGGATACCTTCCTT 724410 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || ||||| || || | || | || |||||| | ||||||||| | ||| | Sbjct 724409 GTCTTGGATCTTTTGCTTGACGTTATCGATAGAGTCAGAGGATTCCACTTCCAAAGTAAT 724350 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| || | || || ||||| || ||||| Sbjct 724349 AGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 724314 >seq197 Length=169696 Score = 122 bits (134), Expect = 7e-23 Identities = 108/135 (80%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||||||||| ||||| ||||| || ||||| || | || ||| | | |||| ||| Sbjct 118644 ACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCC 118585 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 |||||||| || ||||| |||||||| || ||||| || || || ||||| |||||||| Sbjct 118584 AATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCAGGGGGGATACCTTCCTTATCTTGG 118525 Query 101381 ATTTTTTGTTTTACA 101395 || ||||| || ||| Sbjct 118524 ATCTTTTGCTTGACA 118510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396252619365666