Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3304 210 4e-49 seq1090 140 6e-28 seq319 120 6e-22 seq2275 104 4e-17 >seq3304 Length=726533 Score = 210 bits (232), Expect = 4e-49 Identities = 722/1110 (65%), Gaps = 32/1110 (3%) Strand=Plus/Plus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCA 221425 || ||||| | |||||| ||||| | | |||| | | || ||| | || || Sbjct 454319 CCCTCGTAAGTTTCGTAGACACCGTGTTGCTGGGCCAGTTCACACGACGCCTCCAATGCC 454378 Query 221426 GCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAG 221485 || ||||||||||| |||||||| || |||||||| ||||||||||| || ||| Sbjct 454379 GCATGGTAGATGGTTTCAAAGATTTGCTGGTTGAGTCGCTTGGCCTCGGCGGATTCAAAG 454438 Query 221486 GGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTG 221545 || |||| || | |||| | |||||||| ||||| || || || |||||||| | Sbjct 454439 GGGTAGCGCATCAGCAAAAAGGCATCGGCCAGGCCCTGGACACCAATGCCGATGGGACGA 454498 Query 221546 TGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTG 221605 || | ||||||| | ||||| ||| || ||| | |||| |||||| | ||| Sbjct 454499 TGACGTTTGTTGGACCGCTCGGCTTCGACCACAGGGTAATAATTGATGTCGATGATCTTG 454558 Query 221606 TTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAAC 221665 ||||||||| || | |||||||| ||| | ||| || | || || || Sbjct 454559 TTGAGGTTCT------TGGC---AACCACCTTGGTGACCTTGTGCA-AGTGGGCA--AAG 454606 Query 221666 TCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725 ||| || |||| || | ||||| | | ||||| | |||||| ||||||||| Sbjct 454607 TCGTAT--GT-GTGGCGGTCAACGACAAAGGAGGGGAGGGCGATGCTGGCGAGGTTACAC 454663 Query 221726 ACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTG 221785 ||||| | ||||| | ||| || | | ||||||||| || ||||||||| | | | Sbjct 454664 ACGGCGATTTCGTCAGGGCTGGAGTATTCGACGATCTCTGTGCACAGGTTGCTGGAGTGG 454723 Query 221786 ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAG 221845 ||||| || |||| | || || || || |||||| ||||||||||| | ||| || Sbjct 454724 ATGGTGCCTAGGTTCTGTTGGTTCGATTTACGATTGCAGGCGTCCTTGTACAACATGAAT 454783 Query 221846 GGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTC--CCAGAGTTCTCTGGCGCTCA 221903 ||| ||||| ||| || || ||| ||| || | ||| || | | || | | Sbjct 454784 GGATTCCCAGTTTCCGTTTGCGCTTCCATAAT--TGCCGACCAAAGCTTTTGAGCCTTGA 454841 Query 221904 CCGTCCTCTTGACT-GCAC--CCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACT 221960 || ||| | |||| ||| | | || ||||| ||| || | |||| Sbjct 454842 GAGT----TTGCCGAGCACGACCTTGTTGTT--CATACTGTTCATAAAGGGAGACAAAGG 454895 Query 221961 TTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCT 222020 || || | | || | || ||| ||| | | || || | || | ||||| Sbjct 454896 CATCGCCCCAGACATCTTGCAAGCCAGGAGCTTCGTCAGGGCAAAACAAAGACCAGTCGC 454955 Query 222021 TGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTC 222080 ||| | | ||| | || ||| ||||| || || |||||||| || | ||| ||||| | Sbjct 454956 CATTGGCCTCGACACGCTCCATAAAGAGATCAGGAATCCACAGAGCATAAAACAGATCAC 455015 Query 222081 TGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAG 222140 | ||| || || ||| || || | |||||||| ||| || | ||||| Sbjct 455016 GAGCCCGGCTTTCATCTTTGCCCACATTCTTGCGCAGATCCAGGAACGAGAAGACGTCAG 455075 Query 222141 CGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCA 222200 | ||||| || || || |||| || | ||||| || || ||||||||||| ||||||| Sbjct 455076 CATGCCAAGGTTCGAGGTAGATTGCAAAGGCGCCAGGACGTTTGTTGCCACCTTGATCCA 455135 Query 222201 CCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCG 222259 ||| ||| | |||||||| ||||| | || | || ||||| || | ||| Sbjct 455136 -CATAGCGAGCAGTGTTGTTGAAGACTCGAAGCATAGGAAGGAGACCGTTTGAGTGGCCG 455194 Query 222260 TTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGATACC 222318 |||||||| |||||| | ||| || | | ||| ||| | | |||||||| Sbjct 455195 TTGGTGCCAGCAATGTAGGAGCCGGTAGCGCGAATGTT-GTGGATGCTGAGCCCGATACC 455253 Query 222319 ACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGA 222378 || || || |||||| || || |||||||| || || || || || || Sbjct 455254 GCCAGCCGTCTTGGAGATCTGTGCACACTGTTTGAGAGTATCGTAAATCCCTTCGATCGA 455313 Query 222379 GTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTT 222438 || || || | |||||| ||| || || |||| || | | || | | |||| | Sbjct 455314 ATCTTCTTTCATCGTCAGCAAAAAGCAGGAGGACAGTTGCGGTCGGGGAGTGCCGGCGCT 455373 Query 222439 AAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 || | |||||||||||||| |||||||| Sbjct 455374 GAATAAGGTGGGACTGGCGTGGGTAAAGTA 455403 >seq1090 Length=283134 Score = 140 bits (154), Expect = 6e-28 Identities = 714/1127 (63%), Gaps = 36/1127 (3%) Strand=Plus/Minus Query 221351 TTAGACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAA 221410 || || || ||||| || | ||| | || || | ||||| ||| ||| |||| Sbjct 230099 TTGGAGACAGGACTGCCTTGGTATGTTTCATAAGCACCGTCTTGTTGAGCCAATTCGCAT 230040 Query 221411 GACTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGC 221469 ||| || || | || || | ||||||||| ||||||||| | ||||||| | ||||| Sbjct 230039 GAC-GCTTCCAAAGCTGCATAGTAGATGGTTTCAAAGATCTGTTGGTTGAGTTTTTTGGC 229981 Query 221470 CTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCC 221529 ||| || ||||| |||| | | ||| | || |||| || || || || Sbjct 229980 CTCCTCGGATTCAAAGGGGTAGCGCATGAGCATGAAGGCATCAGCCAAGCCTTGGACACC 229921 Query 221530 GATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTT 221589 || ||| ||||| | || | ||||||| | ||||| ||| || ||| | || Sbjct 229920 GAGACCAATGGGGCGATGGCGTTTGTTGGATCGTTCAGCTTCCACCACAGGGTAATAATT 229861 Query 221590 GACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTG 221649 || |||||| | ||||| | ||| ||||||||||| || | |||||||| Sbjct 229860 GATGTCGATGATCTTGTTCAAATTCTTGGTGATGACTTTGGTGACTTGATACAGCTTCT- 229802 Query 221650 GTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAAC 221709 |||| | | | | | || | ||||| | | || || | Sbjct 229801 -----TGAAGTCATAATATTCCCTGTTGA---------CCACATACGAAGGCAGAGCGAT 229756 Query 221710 GCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACA 221769 ||||| || ||||| ||||| || || || | | | || | | || || ||||| Sbjct 229755 ACTGGCGAGATTACAGACGGCGACTTCATCAGGGCTAGAGTATTCGACAATTTCGGTACA 229696 Query 221770 GAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTC 221829 ||||||||||| ||||| || ||||||| | |||||||||||||| || || || Sbjct 229695 CAGGTTGCTGCATTTGATAGTTCCCAGGTTTTGTTGATTAGACTTGCGGTTACATGCATC 229636 Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889 |||||| ||||| ||||| ||||| || ||||| ||| ||| | ||| || Sbjct 229635 CTTGTAAAGCATGAAGGGGTTCCCAGTTTCAGTTTGAGCTTCCAAAATGGCATACCACAG 229576 Query 221890 TTCTCTGGCGCTCACCGTCCTCTTGAC-TGCACCCTCGGTCTT----TTCATACCCGGTA 221944 | | || | | ||| ||||| ||| | || ||| |||||| | Sbjct 229575 CTTTTGAGCCTTGATCGT----TTGACGTGCGC----GGCCTTCCCGTTCATATTTTTCA 229524 Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCG-GGACA 222003 | ||| || || | ||||| || | || | | || ||| | | || ||||| Sbjct 229523 AAAAGCGCCTCGAATTCGTCACCCCACACATCTTGTAAACCAGGAG-CTTCGCTAGGACA 229465 Query 222004 CATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAG 222063 | ||| ||| | ||| ||| || | || ||||||||| || |||||||| || Sbjct 229464 AAACAGGGACCATTCACCATTGGCTTCCACACGCTTCATGAAGAGATCAGGGATCCAGAG 229405 Query 222064 CGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAA 222123 || | |||||||| | | ||| || || |||| || || | |||||||| Sbjct 229404 AGCATAGAAGAGATCACGAGCCCGGATTTCGTCTTTGCCGACATTCTTGCGGAGATCCAA 229345 Query 222124 AAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTT 222183 ||| || | ||||| ||||| || || ||||| | ||| | ||| || ||||| || Sbjct 229344 AAAGGTGAAGACATCAGCATGCCAAGGTTCAAGATACATGGCGAAAGCACCAGGTCGTTT 229285 Query 222184 GTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCA 222242 ||||||||| ||||||| ||| ||| | |||||||| || || | || | | Sbjct 229284 GTTGCCACCTTGATCCA-CATAACGAGCAGTGTTGTTGAAGACACGGAGCATAGGAAGAA 229226 Query 222243 GTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGG 222302 || ||||| ||||| || || |||||| | || ||| | | ||| ||| Sbjct 229225 TACCATTGGAGTAGCCGTTTGTACCAGCAATGTAGGAGCCAGTGGCACGGATGTT-GTGG 229167 Query 222303 CAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 | | ||||| || || ||| ||| ||||| || ||| ||| || || || Sbjct 229166 ATGTTGAGCCCGATCCCGCCTGCGGTTTTTGAGATTTGCGCACAGACCTTCAGTGTTTCG 229107 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421 |||||| || || ||||| ||||| | | | |||| || ||||| || | ||||| Sbjct 229106 TAGATGCCTTCAATGGAGTCTTCCTTCATGGTGAGCAAGAAGCAAGAGGAGAGCTGAGGA 229047 Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 | | || ||| || || | || ||||||||||| || ||||| Sbjct 229046 CGAGGAGTACCGGCATTGAATAAGGTTGGACTGGCGTGGGTGAAGTA 229000 >seq319 Length=278629 Score = 120 bits (132), Expect = 6e-22 Identities = 126/163 (77%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 |||| ||||| || || ||||||||||| ||||| || ||||| ||| ||| | ||| Sbjct 176600 TTTGCTGAGCGTCTTGTCGCCTTTGCTGCCGTGGAAGGTATCTTCTTCTCGGGTGCCTTT 176541 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGA 25988 || ||||||| ||||||||| | | | || | ||||| || || ||| |||||||| Sbjct 176540 GCCTCCATCTTTTGGCTCAAGAA-ACGTGGCCTGATGCCTGGTTTGACCTTCTCCAACGA 176482 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGC 26031 ||||||||||| ||||| || ||||||| ||||| |||||| Sbjct 176481 ACTCATCAGCAGAGACGAAGGCCTCCACACCGATTTCGCCTGC 176439 >seq2275 Length=1761326 Score = 104 bits (114), Expect = 4e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 |||| ||| || || || |||||||||||||| || || ||||| ||| ||| | || Sbjct 1159775 TTTGCCGAACGACTTGTCGCCTTTGCTGCTGTTGAAGGTATCTTCTTCTCTGGTGCATTC 1159716 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAG 25989 || | ||||| ||||||||| || || ||||| || || ||| |||||||| Sbjct 1159715 GCCTCTATCTTTTGGCTCAAGAAGCGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAA 1159656 Query 25990 CTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 || |||||| | ||||| || || |||| || ||||||||| |||| Sbjct 1159655 CTGATCAGCCGAGACGAAGGCCTTCACACCGACTTTGCCTGCTTGCT 1159609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928782822830720