Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq3256 95.1 1e-14 seq3208 91.5 1e-13 seq236 84.2 2e-11 >seq3256 Length=796958 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || |||||||| || || || || || || || || ||||| || |||| ||| || Sbjct 723171 AACATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTTGAATCT 723230 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || | | | | | |||||||||| || || || || ||| | ||| ||| Sbjct 723231 TCCGACTCCATCGACAACGTCAAGCAAAAGATTCAAGATAAGGAAGGAATCCCCCCAGAC 723290 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || || |||| ||||| || ||||| |||||||||||| ||| | | || || Sbjct 723291 CAGCAACGACTCATCTTCGCCGGCAAGCAATTGGAAGATGGCCGCACTCTTTCTGACTAC 723350 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||||||||| ||||||||||| || |||| Sbjct 723351 AACATTCAAAAGGAATCTACTCTTCATCTGGT 723382 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || || || || || ||||||||| ||| |||| | || Sbjct 723402 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATTACCTTGGAAGTGGAATCCTCC 723461 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || | | | | |||||||||| ||| ||||| || || | ||| ||| ||| Sbjct 723462 GACTCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAA 723521 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | | ||||| || ||||||||| |||||||| | || | | || || ||| Sbjct 723522 CAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAAC 723581 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 || ||||| ||||||||||| || |||| Sbjct 723582 ATCCAAAAGGAATCTACTCTTCATTTGGT 723610 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || | || |||||||| || ||| ||| |||| | || Sbjct 723858 ATGCAAATCTTCGTCAAGACCCTGACTGGTAAAACAATCACCCTTGAAGTGGAATCCTCT 723917 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || | | | | | | |||||||| ||| ||||| || ||| | ||| ||| ||| Sbjct 723918 GACTCTATCGACAACGTGAAGCAAAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAA 723977 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | | ||||| || ||||||||| |||||||| | || | | || || ||| Sbjct 723978 CAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAAC 724037 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 || ||||| ||||||||||| ||| |||| Sbjct 724038 ATCCAAAAGGAATCTACTCTTCACCTGGT 724066 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || || || ||||| || || || ||| |||| | || Sbjct 724086 ATGCAAATCTTTGTGAAGACCTTGACTGGTAAGACAATCACTCTGGAAGTGGAATCCTCG 724145 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || | | | | || | |||||||| ||| ||||| || || | ||| ||| ||| Sbjct 724146 GACTCTATCGACAATGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAA 724205 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | | ||||| || || ||||||||||||||| || | | || || ||| Sbjct 724206 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCCGTACGCTCTCTGACTACAAC 724265 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 || ||||||||||||||||| ||| |||| Sbjct 724266 ATCCAAAAAGAATCTACTCTTCACTTGGT 724294 >seq3208 Length=262556 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||||||||| | || || || |||||||| ||| |||| |||| Sbjct 84291 ATGCAAATCTTTGTAAAAACTCTTACTGGCAAGACCATTACATTGGAAGTGGAATCTTCT 84232 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || | | | | | |||| ||||| ||| || || || || | || || ||| Sbjct 84231 GACTCCATCGACAACGTCAAACAAAAGATCCAAGATAAGGAAGGCATCCCACCCGACCAA 84172 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 28731 ||| | ||||||||||| || ||||| | |||||| | | ||| | |||| || | Sbjct 84171 CAGCGCCTTATCTTTGCCGGGAAACAGCTTGAAGATGGCCGCACACTCT--CCGACTACA 84114 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGT 28762 |||||||||| ||||| ||||| || |||| Sbjct 84113 ACATTCAAAAGGAATCGACTCTTCATCTGGT 84083 >seq236 Length=318481 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || | || || || || || ||| ||| |||| | || Sbjct 111979 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 111920 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || | | | | | |||||||||| || || ||||| || | || |||||| Sbjct 111919 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGATCAA 111860 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | ||||||||||| || |||||| |||||||| || | | || || ||| Sbjct 111859 CAACGTCTTATCTTTGCCGGTAAACAACTGGAAGATGGCCGCACGCTCTCTGACTACAAC 111800 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 || ||||||||||| || |||||| |||| Sbjct 111799 ATCCAAAAAGAATCCACCCTGCACTTGGT 111771 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || | || || || || || ||| ||| |||| | || Sbjct 112791 ATGCAAATCTTCGTCAAGACGCTTACAGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 112732 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || | | | | || |||||||||| || ||||| || || | || ||| ||| Sbjct 112731 GACTCCATCGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 112672 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | || |||||||| ||||||||| |||||||| || | | ||||| ||| Sbjct 112671 CAACGTCTCATCTTTGCCGGCAAACAACTGGAAGATGGCCGCACCCTCTCTGATTACAAC 112612 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 |||||||| ||||| ||||| || |||| Sbjct 112611 ATTCAAAAGGAATCCACTCTTCATTTGGT 112583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425377124493102