Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq3466 201 2e-46 seq209 199 5e-46 seq2869 197 2e-45 >seq3466 Length=2213 Score = 201 bits (222), Expect = 2e-46 Identities = 342/495 (69%), Gaps = 8/495 (2%) Strand=Plus/Minus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || ||||| | ||||| || || ||||| ||||| || ||||| |||||||| | ||| Sbjct 773 CCAGTGGCCAGGACAAAGTCTTCGGGTTCGTCTTGCTGCAGCATCAACCACATGCCTTCG 714 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 ||||| || | ||||| ||||| ||||| ||||||| || || ||||| | ||| Sbjct 713 ACATAGTCACGCGCATGGCCCCAATCACGCTTGGCATCAATGTTACCGAGATACAGACAT 654 Query 47908 TCTTGCTTACCTTCAGAGATTGCTTTT----AATGCTCTTGTAATCTTACGAGTTACAAA 47963 ||||| ||| ||||| | | | | || | | ||||| || || ||||| Sbjct 653 TCTTGACGACC----GAGATGGATATCGGCCACGGCACGGGAGATCTTGCGGGTGACAAA 598 Query 47964 AGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCC 48023 || ||||| | |||||||| || || || || ||||| ||||||| ||||| Sbjct 597 CGTGCGGCCACGGCGGGGAGATTCGTGGTTGAAGAGGATACCGTTACAGGCGTACATGTT 538 Query 48024 GTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGG 48083 |||||||||||| ||||| || |||||||| || ||||| || || ||||| || || Sbjct 537 GTATGATTCACGGTAGTTGACGACAATCCAGTAACCGTAGAGCTTGGCCACACCGTAGGG 478 Query 48084 AGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAG 48143 ||| || || ||||| || ||||| || | || || || || ||||| || || || Sbjct 477 AGAGCGGGGGTAGAAGGGGGTGGTTTCCTTTTGCGGGGTTTCCACAACCTTGCCGTACAG 418 Query 48144 TTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGC 48203 |||| |||||| ||||| |||| || || | ||| || || ||||| || Sbjct 417 TTCAGAGGTGGAGGCTTGGTAGAAGCGCACACGATCGGTCAGACCACAGGTACGGATGGC 358 Query 48204 CTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAA 48263 || | || | |||||||| | |||||| | |||||| || || | ||| || || Sbjct 357 ATCTAACAGACGAAGGGTGCCGAGAGCATCTACATCACCAGTGTATTCAGACATATCGAA 298 Query 48264 CGAAACCTTTACATG 48278 || ||||| || || Sbjct 297 GGACACCTTGACGTG 283 >seq209 Length=213014 Score = 199 bits (220), Expect = 5e-46 Identities = 371/539 (69%), Gaps = 12/539 (2%) Strand=Plus/Plus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || ||||| | ||||| || ||||||| |||||||| | ||| | |||||| | || Sbjct 62487 CCAGTGGCCAACACAAAGTCTTCAGGTTGATCTTGTTGCAACATCAGCCACATGCCTTCA 62546 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 || || || | ||||| ||||| ||||| ||||| | || || || || | |||| Sbjct 62547 ACGTAGTCCCGAGCATGACCCCAATCACGCTTAGCATCGATGTTACCGAGGTAGAGACAG 62606 Query 47908 TCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTA-ATCTTACGAGTTACAAAAGT 47966 ||||| ||| | ||| | | || |||| | |||||||| || ||||| || Sbjct 62607 TCTTGACGACCAAGATGGATATCAGCCACAGC-CTTGGAGATCTTACGGGTCACAAAGGT 62665 Query 47967 TTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTA 48026 ||||| | || ||||| || || || || ||||| ||||||| ||||| ||| Sbjct 62666 ACGGCCACGGCGAGGGGATTCGTGGTTGAAGAGGATACCGTTACAGGCGTACATGTTGTA 62725 Query 48027 TGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGA 48086 ||||||||| ||||| || |||||||| |||||||| || || |||||||||||||| Sbjct 62726 TGATTCACGGTAGTTGACGACAATCCAGTAACCATAGAGCTTGGCCACACCATAAGGAGA 62785 Query 48087 ACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTC 48146 || || ||||| || ||||| || | || || || || || |||||||| | ||| Sbjct 62786 GCGAGGGTAGAAGGGGGTGGTTTCCTTTTGAGGGGTTTCCACTACTTTACCATATAATTC 62845 Query 48147 ACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAA----CGGACTG 48202 | ||||| ||||| |||| ||| || | |||| || || || | |||| | Sbjct 62846 AGAAGTGGAGGCTTGGTAGAAACGCACACGATCTGTCA----AACCACAGGTTCGGATGG 62901 Query 48203 CCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAA 48262 | || || | | || || || | ||||| | |||||| || || | ||| |||| Sbjct 62902 CATCCAGTAAACGCAAAGTACCGAGAGCATCGACATCACCAGTGTATTCAGACATATCAA 62961 Query 48263 ACGAAACCTTTACATGACTCTGTGC-CCCAAGATTATAAATCTCATCTGGTTGAACCTG 48320 | || ||||| || ||| || || |||||| || || || ||| ||||| || || Sbjct 62962 AAGACACCTTGACGTGAGATTGGGCACCCAAG-TTGTAGATTTCAGTGGGTTGGACTTG 63019 >seq2869 Length=18354 Score = 197 bits (218), Expect = 2e-45 Identities = 334/483 (69%), Gaps = 8/483 (2%) Strand=Plus/Plus Query 47800 ACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTG 47859 ||||| || ||||||| |||||||| | ||| | ||||||| | || ||||| || | Sbjct 9914 ACAAAGTCGTCAGGTTGATCTTGTTGCAACATCAGCCACATACCTTCCACATAGTCCCGA 9973 Query 47860 GCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCT 47919 ||||| ||||| ||||| ||||| | || || ||||| | || ||||| ||| Sbjct 9974 GCATGACCCCAATCACGCTTGGCATCGATGTTGCCGAGATAAAGGCACTCTTGACGACC- 10032 Query 47920 TCAGAGATTGCTTTT----AATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACG 47975 ||||| | | | | || | | ||||| || || ||||| || ||||| Sbjct 10033 ---GAGATGGATATCCGCCACAGCACGAGAGATCTTGCGGGTGACAAAGGTACGGCCACG 10089 Query 47976 TCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACG 48035 | || |||||||| || || || ||||| ||||||||||||| ||| |||||||| Sbjct 10090 ACGAGGGGATTCATGGTTGAAGAGGATACCGTTACAGGCATACATGTTGTAAGATTCACG 10149 Query 48036 ATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATA 48095 ||||||| || |||||||| |||||||| || || |||||||| ||||| || || || Sbjct 10150 ATAGTTCACGACGATCCAGTAACCATAGAGCTTGGCCACACCATATGGAGAGCGGGGGTA 10209 Query 48096 GAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGA 48155 ||| || ||||| || | || || ||||| || || || || |||||| ||| || Sbjct 10210 GAAGGGGGTGGTTTCCTTTTGGGGGGTCTCCACTACTTTGCCGTACAGTTCAGAGGTCGA 10269 Query 48156 TGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGCCTCAAGCACTCT 48215 ||||| |||| || || | ||| || || ||| | || || || | || Sbjct 10270 CGCTTGGTAGAATCGCACACGATCGGTCAGGCCACAGGTACGAATCGCATCTAGTAATCG 10329 Query 48216 CAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTAC 48275 ||||| || | ||||| | |||||| || || | ||| ||||| || ||||| || Sbjct 10330 AAGGGTACCAAGAGCATCCACATCACCAGTGTATTCAGACATATCAAATGAGACCTTGAC 10389 Query 48276 ATG 48278 ||| Sbjct 10390 ATG 10392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665449994886160