Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1090 214 2e-50 seq209 109 7e-19 seq2275 98.7 1e-15 seq3304 95.1 1e-14 seq3466 87.8 2e-12 >seq1090 Length=283134 Score = 214 bits (236), Expect = 2e-50 Identities = 1099/1727 (64%), Gaps = 38/1727 (2%) Strand=Plus/Plus Query 75225 TCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACG 75284 ||||||| || || | || || || || ||||| || || || | | || || ||| Sbjct 228923 TCATGCGTGTGGCCGTGGGTATTCATGGCGAAGATATCGACTCGGCTATCGAAACCTACA 228982 Query 75285 ACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACA 75343 | ||||| || ||| |||| ||||| | |||||| | |||||||| ||||| Sbjct 228983 ATCTCATGTCGGAAAAGTAC-TTCACCCACGCCAGTCCAACCTTATTCAATGCCGGTACT 229041 Query 75344 CCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGT 75403 || | || ||| | ||| ||||||| | || ||| ||||| ||||| || | || Sbjct 229042 CCTCGTCCTCAGCTCTCCTCTTGCTTCTTGCTCACCATGAAGGAAGACTCCATTGAAGGC 229101 Query 75404 ATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATG 75463 ||||| | ||| || | || ||||||||||||||||| || || || || ||| | Sbjct 229102 ATCTACGAAACACTGAAGGTCTGTGCGCAAATCTCAAAAACCGCAGGCGGGATCGGGCTC 229161 Query 75464 CACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGAT 75523 ||||||| | | | |||| | || ||| || ||||| || | || || Sbjct 229162 AACATCCACAACATCCGTGCCACTGGCTCCTACATTGCTGGTACAAACGGCTACTCCAAT 229221 Query 75524 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGG 75583 |||||| |||| ||||| || || || ||| ||| || || ||||| |||||| | || Sbjct 229222 GGTATTCTTCCTATGCTCCGTGTCTTCAACAACACTGCTCGTTATGTGGATCAAG-GTGG 229280 Query 75584 CGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGA 75639 | | | | || | |||| | || | ||||| |||||||| ||| || | Sbjct 229281 CAACAAACGACCTGGTGCTTTCGCCATGTATCTTGAACCTTGGCATGCTGATGTCTTCAC 229340 Query 75640 GTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGG---CTCGGTGTAGAGATCTCTT 75696 || | || | || ||| | | | | |||| | ||| | | |||||||| Sbjct 229341 CTTTTTGGATCTCCG---CAAGAATGTCGGCAAAGACGAAATCCGGGCTCGTGATCTCTT 229397 Query 75697 TTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTC 75756 | | || ||||| || || || ||||||||||| || || | |||| ||||||| Sbjct 229398 CTATGCTCTCTGGATCCCTGATCTCTTCATGAAGCGTGTGGAAGCCAATGGTGAATGGTC 229457 Query 75757 TCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGC 75816 || || ||||| | | || || ||| | || | | |||||| || || || || Sbjct 229458 CCTGTTTTGTCCTAGCGAAGCTCCTGGTTTACAAGATGTGTGGGGTGACGAATTCGAGGC 229517 Query 75817 CCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATG- 75875 || | ||| |||||| ||| || | | || | | | | || | | | | Sbjct 229518 GCTTTTTGAAAAATATGAACGGGAAGGCCGCG-CACGTCAAACGATCAAGGCTCAAAAGC 229576 Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 | ||| | || ||| | || | || || || ||||| | || | ||||||||||||| Sbjct 229577 TGTGGTATGCCATTTTGGAAGCTCAAACTGAAACTGGGAACCCCTTCATGCTTTACAAGG 229636 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 |||| |||||| ||| ||| ||| | || ||||||| ||||| || || || | Sbjct 229637 ATGCATGTAACCGCAAGTCTAATCAACAAAACCTGGGAACTATCAAATGCAGCAACCTGT 229696 Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAA 76055 | || |||||| | || ||| | ||||| || || || ||| | || | Sbjct 229697 GTACCGAAATTGTCGAATACTCTAGCCCTGATGAAGTCGCCGTCTGTAATCTCGCCAGTA 229756 Query 76056 TCGCCCTTCCAAAGTAT---GTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTC 76112 |||| || || |||| ||||| || || | || ||| | | || || Sbjct 229757 TCGCTCTGCCTTCGTATGTGGTCAA--CAGGGAAT----ATTATGACTTCAAGAAGCTGT 229810 Query 76113 ATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATC 76172 || || |||| || | | ||||| ||| | ||| |||| |||| |||| ||| | Sbjct 229811 ATCAAGTCACCAAAGTCATCACCAAGAATTTGAACAAGATCATCGACATCAATTATTACC 229870 Query 76173 CCGTTGAGACTGCGCGAAAG-TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAA 76231 | || | | || ||| | || || | || || | || |||||| | ||||| ||| Sbjct 229871 CTGTGGTGGAAGC-TGAACGATCCAACAAACGCCATCGCCCCATTGGTCTCGGTGTCCAA 229929 Query 76232 GGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAG 76291 || | || |||| || || | |||||| | ||||| || || || ||||| | Sbjct 229930 GGCTTGGCTGATGCCTTCATGCTCATGCGCTACCCCTTTGAATCCGAGGAGGCCAAAAAA 229989 Query 76292 ATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTG 76351 | || | |||||||||||||| || | ||| | |||| ||| || |||||| Sbjct 229990 CTCAACCAACAGATCTTTGAAACCATCTACTATGCAGCTTTGGAAGCGTCATGCGAATTG 230049 Query 76352 GCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTT 76411 ||| || | ||| | ||||| |||| | || ||| | ||| | || || Sbjct 230050 GCTCAACAAGACGGTGCTTATGAAACATACCAAGGCAGTCCTGTCTCCAAGGGCAACCTC 230109 Query 76412 CAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTACGACTGGGATGTTCTCAAGG 76469 || | || ||||||| || | ||| | | || | ||||||| | | | || | Sbjct 230110 CAATACGACATGTGGG-GTGTCACACCTACCGATC-TTTGGGACTGGGCCGCTTTGAAAG 230167 Query 76470 AACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCT 76529 |||| | | ||| | || ||| || | | ||||| ||||| ||||| | Sbjct 230168 CCAAGATCAGCCAACACGGTGTCCGCAACTCCCTGCTTGTTGCACCTATGCCCACAGCTT 230227 Query 76530 CCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACC 76589 ||||| | |||||| | || || |||||||| ||||| ||||| | ||| ||||| Sbjct 230228 CCACCTCGCAAATCCTCGGCTTCAACGAATGCTTCGAACCTTACACCTCCAACCTCTACA 230287 Query 76590 TGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCA 76649 | | |||||| ||||| || || |||||| ||| |||| ||| | Sbjct 230288 CCCGTCGTGTCCTCGCTGGTGAATTCCAAATCGTCAACCCTTGGCTCCTCAAAGACTTGG 230347 Query 76650 AGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCA 76709 | | || ||||| | | || || ||| | | ||| || | |||| || Sbjct 230348 TCGAACTCGGCATCTGGAACGAAGACATCAAGAACCGCATCATGTCTGACAGTGGCTCGG 230407 Query 76710 TTCAAAATATCTCAG-ATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAA 76768 | || || ||| ||| | ||||| ||| || |||| | ||| || || |||||| Sbjct 230408 TACAGAACATC-CAGAACATCCCGGATCATCTCAAAGCAATGTACAAGACGGTATGGGAA 230466 Query 76769 ATCAAG-ATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAG 76827 ||| | | | | ||||||| |||||||| ||||| || ||| || || ||||| Sbjct 230467 ATCTCGCAACGCACA-CTCATTGATATGGCCGCTGATCGGGGGGCCTTTATCGACCAAAG 230525 Query 76828 TCAAAGTATGAATCTATTCATGGAAAGTCC--AACGATGTCCAAGCTCTCTTCTATGCAT 76885 |||||| ||||| | ||||| | |||| ||| || |||||| | |||||| Sbjct 230526 TCAAAGCTTGAATATCTTCATCG-GTGTCCCTAACTTTG-GCAAGCTGACCAGTATGCAC 230583 Query 76886 ATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | || | |||||| |||||||||| ||||| ||||| || ||||| Sbjct 230584 TTTTATGGATGGAAAAAGGGGCTCAAGACCGGCATGTATTACCTCCG 230630 >seq209 Length=213014 Score = 109 bits (120), Expect = 7e-19 Identities = 266/401 (66%), Gaps = 4/401 (1%) Strand=Plus/Plus Query 177573 CACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCTTCTTGTTGAAGCAT 177632 ||||| || || || || || || | ||| | || |||| | |||||||| | ||| Sbjct 62471 CACAGTATGAGTTTCACCAGTGGCCAACACAAAGTCTTCAGGTTGATCTTGTTGCAACAT 62530 Query 177633 GAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTGGCAGCGTTGAGGTT 177692 ||||||||| ||||||| |||||| ||||||||||| || | ||| | || ||| Sbjct 62531 CAGCCACATGCCTTCAACGTAGTCCCGAGCATGACCCCAATCACGCTTAGCATCGATGTT 62590 Query 177693 ACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACGCCATCAGTAATCTT 177752 |||||| | || | ||| ||| || | || | | | ||||| Sbjct 62591 ACCGAGGTAGAGACAGTCTTGACGACCAAGATGGATATCAGCCACAGCCTTGGAGATCTT 62650 Query 177753 CTTTGTGACAAAGT--CGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCGGAG 177810 || |||||| |||| | || | || |||||||||||||||||||| ||| Sbjct 62651 ACGGGTCACAAAGGTACGGC--CACGGCGAGGGGATTCGTGGTTGAAGAGGATACCGTTA 62708 Query 177811 CAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAATTTG 177870 ||||| ||||| || ||||| ||||| || ||| | ||||| | | | ||| Sbjct 62709 CAGGCGTACATGTTGTATGATTCACGGTAGTTGACGACAATCCAGTAACCATAGAGCTTG 62768 Query 177871 GAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCTCGG 177930 | || ||||| || || ||||||||||| || || |||| || ||||| Sbjct 62769 GCCACACCATAAGGAGAGCGAGGGTAGAAGGGGGTGGTTTCCTTTTGAGGGGTTTCCACT 62828 Query 177931 ACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTATACACG 177971 ||||||||| | | || ||||| ||||||||||| | ||| Sbjct 62829 ACTTTACCATATAATTCAGAAGTGGAGGCTTGGTAGAAACG 62869 >seq2275 Length=1761326 Score = 98.7 bits (108), Expect = 1e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 ||||| ||||| || ||| | || ||||| ||| || |||||||||||||| || || Sbjct 1159778 TCCTTTGCCGAACGACTTGTCGCCTTTGCTGCTGTTGAAGGTATCTTCTTCTCTGGTGCA 1159719 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||| | |||| | |||| | |||||||| ||| | ||||| ||| | |||||| || Sbjct 1159718 TTCGCCTCTATCTTTTGGCTCAAGAAGCGTGGTTTGATGCCTGGCTTGACCTTCTCCAAC 1159659 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 ||||| || |||||| || || || ||| || |||||| Sbjct 1159658 GAACTGATCAGCCGAGACGAAGGCCTTCACACCGACTTTGCC 1159617 >seq3304 Length=726533 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 76727 ATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATG-T 76785 ||||| |||||| ||||| |||||| ||||| ||||||||| | | | | | Sbjct 123543 ATCCCTGATGATCTCAAGGCACTCTACAAGACAGTCTGGGAAATCTC-ACAACGGGTCAT 123485 Query 76786 CATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATT 76845 ||| ||||||||||| || |||| | ||| || || ||| ||| |||||||| || Sbjct 123484 CATCGACATGGCCGCCGACCGTGCTGCCTTTATCGACCAATCGCAATCCATGAATCTCTT 123425 Query 76846 CA-TGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGG 76904 || || | | | | | | ||||||| | || ||||| | || || |||||| ||| Sbjct 123424 CACAGGCGAACCTACCTACG-GCAAGCTCACCTCAATGCACTTCTATGCTTGGAAAAAGG 123366 Query 76905 GGCTCAAAACCGGAATGTACTATCTCCGATCAA 76937 | ||||| ||||| ||||||||| | ||||||| Sbjct 123365 GACTCAAGACCGGGATGTACTATTTACGATCAA 123333 >seq3466 Length=2213 Score = 87.8 bits (96), Expect = 2e-12 Identities = 261/398 (66%), Gaps = 10/398 (3%) Strand=Plus/Minus Query 177573 CACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCTTCTTGTTGAAGCAT 177632 ||| | ||| || || || || || | ||| | || || | || ||||| || ||||| Sbjct 789 CACGGTGTGAGTTTCGCCAGTGGCCAGGACAAAGTCTTCGGGTTCGTCTTGCTGCAGCAT 730 Query 177633 GAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTC---TGGCAGCGTTGAG 177689 | ||||||| |||| |||||||| ||||| ||||| || | ||||| | || Sbjct 729 CAACCACATGCCTTCGACATAGTCACGCGCATGGCCCCAATCACGCTTGGCATCAATG-- 672 Query 177690 GTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACGCCATCAGTAAT 177749 |||||||| | || | ||| ||| || | ||| || | || Sbjct 671 -TTACCGAGATACAGACATTCTTGACGACCGAGATGGATATCGGCCACGGCACGGGAGAT 613 Query 177750 CTTCTTTGTGACAAA-GT-CGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 ||| |||||||| || |||| | || | || |||||||||||||||||||| ||| Sbjct 612 CTTGCGGGTGACAAACGTGCGGC--CACGGCGGGGAGATTCGTGGTTGAAGAGGATACCG 555 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||||| ||||| || ||||| ||||| || ||| | ||||| | || | Sbjct 554 TTACAGGCGTACATGTTGTATGATTCACGGTAGTTGACGACAATCCAGTAACCGTAGAGC 495 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| || || ||| || || ||||||||||| || || |||| || ||||| Sbjct 494 TTGGCCACACCGTAGGGAGAGCGGGGGTAGAAGGGGGTGGTTTCCTTTTGCGGGGTTTCC 435 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || || || ||| || || || ||||||||||| Sbjct 434 ACAACCTTGCCGTACAGTTCAGAGGTGGAGGCTTGGTA 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596529793893440