Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3208 91.5 3e-13 seq236 91.5 3e-13 >seq3208 Length=262556 Score = 91.5 bits (100), Expect = 3e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||| | | ||||| |||||||| | || | || || ||| || |||||||| Sbjct 84064 ACCACCACGAAGACGAAGCACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGA 84123 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | || | ||| || | ||||| |||||||| || | | |||||| || || || Sbjct 84124 GAGTGTGCGGCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGG 84183 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| |||||||| || || ||| | || || | || ||||| || || Sbjct 84184 GATGCCTTCCTTATCTTGGATCTTTTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCAC 84243 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| | || || || || || || || ||||||||||| |||||||| Sbjct 84244 TTCCAATGTAATGGTCTTGCCAGTAAGAGTTTTTACAAAGATTTGCAT 84291 >seq236 Length=318481 Score = 91.5 bits (100), Expect = 3e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||| | | || || |||| |||| || | ||||| || || ||||| || Sbjct 111752 ACCACCACGGAGACGGAGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGA 111811 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||| | ||| || | |||||| |||||||| || | | |||||||||||||| Sbjct 111812 GAGCGTGCGGCCATCTTCCAGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGG 111871 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || |||||||||||||| || || || | || |||| || || || || || Sbjct 111872 GATGCCTTCTTTATCTTGAATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCAC 111931 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| || || || || || || || || || || ||||| |||||||| Sbjct 111932 TTCAAGGGTGATTGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 111979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899594370560160