Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq3256 109 8e-19 seq236 93.3 6e-14 seq319 87.8 3e-12 >seq3256 Length=796958 Score = 109 bits (120), Expect = 8e-19 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || ||||||| || |||||||| || ||||| ||| ||| Sbjct 724314 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACTATTACTTTGGAAGTGGAATCCTCT 724373 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || ||| ||||| || | || || ||||| || ||||| || || ||||| || Sbjct 724374 GACTCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 724433 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | ||||| | |||||| ||||||||||||||| | ||||| || || || | Sbjct 724434 CAACGTTTGATCTTTGCCGGGAAGCAGCTCGAAGATGGTCGTACTTTGTCTGACTACA-- 724491 Query 156003 ATATCCAAAGAG 156014 | ||||||| || Sbjct 724492 ACATCCAAAAAG 724503 >seq236 Length=318481 Score = 93.3 bits (102), Expect = 6e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || ||||||| || || || || | ||||| ||| ||| Sbjct 111979 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 111920 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || ||| ||||| || | || || ||||||||||||||||| ||||| || ||| Sbjct 111919 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGATCAA 111860 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 ||| | | || | ||||||||| || || |||||| Sbjct 111859 CAACGTCTTATCTTTGCCGGTAAACAACTGGAAGAT 111824 >seq319 Length=278629 Score = 87.8 bits (96), Expect = 3e-12 Identities = 206/308 (67%), Gaps = 5/308 (2%) Strand=Plus/Plus Query 18384 TCTCTATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTA 18443 |||| || |||| ||||| | |||||||| | || || |||||||||||||| | Sbjct 176780 TCTCAATGGCATCAAACAGGTTTTCTTTTTCCACAGGGTCCTTGATATAAGTGTCGATCA 176839 Query 18444 ACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATC 18503 |||| ||| |||||| ||| ||| |||| || || || || | ||| || || Sbjct 176840 ACAAGCTATAGGTTTCAGCATGGATGTTTTCAATCATGATTTGGAATCCATAGAAGCATT 176899 Query 18504 TAGCCTC-GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATA 18562 | || || | ||| |||| | | ||||| | ||| ||||| || ||||| || ||| Sbjct 176900 TGGCTTCAGCGATCTTGACTTCATCCATAAAGT-TTTGCACCAAGTTTTCATTGACGATA 176958 Query 18563 CCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTG 18622 || || | ||| || || ||||| | || || || | ||||| || || Sbjct 176959 CCATCCGAGCTTGCAAAGAAGGCCAAGATATGAGAGATAAAGTAGCGTTCATCGTCGTTC 177018 Query 18623 AGATTGTT---CCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAA 18679 | ||||| ||| |||| | | || || || ||||| | |||||| | |||||||| Sbjct 177019 ATCTTGTTTTCCCAGTCATTTGTGTCCTTAGAAAGATCGATTTCTTCGGCGGTCCAAAAG 177078 Query 18680 GATGATTC 18687 || | ||| Sbjct 177079 GAGGCTTC 177086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731823165840800