Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3256 127 1e-24 seq3208 104 2e-17 >seq3256 Length=796958 Score = 127 bits (140), Expect = 1e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 |||||||| |||| || ||||| |||||||| ||||| || || |||| |||| Sbjct 723385 AGGACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCT 723326 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||| ||||||||||| ||||||||||||||| | || | || ||||| || Sbjct 723325 TCCAATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTTATCT 723266 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||||| |||||| | || || || | || || || | || |||||| Sbjct 723265 TGAATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACTTCGAGAGTGATGGTC 723206 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || | |||||| || ||||| |||||| Sbjct 723205 TTGCCAGTCAAGGTCTTGACGAAGATTTGCATG 723173 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 |||||||| || | || || || || ||||| ||||| || | | || |||| Sbjct 724525 AGGACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAAAGTACGACCATCT 724466 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||||| |||||||||||| | || | || |||||||| Sbjct 724465 TCGAGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGGGATACCTTCCTTGTCT 724406 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||||| |||||| | || || ||| || || || || | || || ||| Sbjct 724405 TGGATCTTTTGCTTGACGTTATCGATAGAGTCAGAGGATTCCACTTCCAAAGTAATAGTC 724346 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| |||||||| ||||| Sbjct 724345 TTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 724314 >seq3208 Length=262556 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || ||||| |||| || ||||| |||||||| ||||| || || |||| |||| Sbjct 84080 AGCACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCT 84139 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || ||||| ||||| || || || ||||| | || | || ||||| || Sbjct 84140 TCAAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTATCT 84199 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || |||||||||||| | || || ||| | || || || | || |||||| Sbjct 84200 TGGATCTTTTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCACTTCCAATGTAATGGTC 84259 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || || || || || ||||||||||| ||||| || Sbjct 84260 TTGCCAGTAAGAGTTTTTACAAAGATTTGCATAAT 84294 Score = 87.8 bits (96), Expect = 1e-12 Identities = 168/246 (68%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 34736 CATATCCAA--TCATTTCCTCCCCTC--AACCTCAGGACCAGGTGAATGGTGCTCTCCTT 34791 ||||||||| || ||| | |||| || | || |||| ||| | ||| ||||| Sbjct 83818 CATATCCAAGGTCTCTTCGCCACCTCGTAAACGGAGCACCAAGTGTAGGGTTGATTCCTT 83877 Query 34792 CTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAG 34851 || ||||| || || || || |||| |||| || ||||| || || || ||||| || Sbjct 83878 TTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCTAGTTGTTTGCCTGCAAAGATGAG 83937 Query 34852 TCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTAT 34911 ||||||||||| | || | || || || || | || ||||| |||||| | || Sbjct 83938 CCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCTTGAATCTTTTGCTTGACGTTGTCGAT 83997 Query 34912 CGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGAT 34971 || || || || || || | || || ||||| || || | ||||| || ||||| Sbjct 83998 AGAGTCTGAGGATTCCACTTCCAGAGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGAT 84057 Query 34972 CTGCAT 34977 |||||| Sbjct 84058 CTGCAT 84063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325671611444222