Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq236 147 2e-30 seq3208 145 6e-30 seq3256 141 7e-29 seq197 104 2e-17 seq2275 102 6e-17 >seq236 Length=318481 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||||||||| |||||||| ||||||||||| ||||| | | |||||| Sbjct 112576 ACGGAGAACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCC 112635 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||||||||| ||| | || | | ||| || || || |||||||| || || Sbjct 112636 ATCTTCCAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTT 112695 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||||| |||||| | || | | |||||| ||| |||||||| || || Sbjct 112696 GTCTTGAATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGTGAT 112755 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | || || || || || ||||| Sbjct 112756 TGTCTTGCCTGTAAGCGTCTTGACGAAGATTTGCAT 112791 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || |||||||||||||| ||||| || || | | ||||| Sbjct 111764 ACGGAGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTGCGGCC 111823 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| || ||| | || | | ||| ||||| || || || || ||||| Sbjct 111824 ATCTTCCAGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTT 111883 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | ||||| ||||| | || | || |||||| ||| |||||||| || || Sbjct 111884 ATCTTGAATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGAT 111943 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||| || ||||| || ||||| Sbjct 111944 TGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 111979 Score = 116 bits (128), Expect = 3e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || |||||||||||||| ||||| || |||| | ||||| Sbjct 111992 ACGGAGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCCGAGAGCGTGCGGCC 112051 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| |||||| | || | | ||| ||||| || || || || ||||| Sbjct 112052 ATCTTCCAGTTGTTTACCAGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTT 112111 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | ||||| ||||| | || | || |||||| ||| |||||||| || || Sbjct 112112 ATCTTGGATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGAT 112171 Query 29751 AGTTTTG 29757 || ||| Sbjct 112172 GGTCTTG 112178 >seq3208 Length=262556 Score = 145 bits (160), Expect = 6e-30 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| |||||||| || || || ||||| ||||| ||||| ||||| | | |||||| Sbjct 83846 AAACGGAGCACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAGAGAGTGCGA 83905 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 ||| || ||||||||||| ||| | || | | |||||| || || || || || ||| Sbjct 83906 CCATCTTCTAGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCT 83965 Query 29689 TTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 || ||||| | ||||| ||||| | || | || ||| || ||| ||||| ||||| Sbjct 83966 TTATCTTGAATCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTG 84025 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| |||||||| || || || || || |||||||| Sbjct 84026 ATAGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 84063 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||| |||||| || ||||| ||||||||||| || || | | ||||| Sbjct 84076 ACGAAGCACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCC 84135 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| || ||| | || | | || || || || || || || || || Sbjct 84136 ATCTTCAAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTT 84195 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | ||||||||||| | || | | ||||||| ||| ||||| | || || Sbjct 84196 ATCTTGGATCTTTTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCACTTCCAATGTAAT 84255 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||||| ||||| || ||||| Sbjct 84256 GGTCTTGCCAGTAAGAGTTTTTACAAAGATTTGCAT 84291 >seq3256 Length=796958 Score = 141 bits (156), Expect = 7e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||||||||| || ||||| ||||| ||||| || || | | |||||| Sbjct 723617 ACGGAGAACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACC 723558 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||||||||| | ||||| | ||| || || || || ||||| || || Sbjct 723557 ATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATACCTTCCTT 723498 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||||| ||||| | || | || ||| || ||| ||||| | || || Sbjct 723497 GTCTTGGATCTTTTGCTTGACGTTATCGATAGAGTCGGAGGATTCCACTTCCAAGGTAAT 723438 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| ||||| || ||||| || ||||| Sbjct 723437 GGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 723402 Score = 138 bits (152), Expect = 9e-28 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||| || || ||||||||||| ||||| || || | | || ||| Sbjct 724529 ACGTAGGACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAAAGTACGACC 724470 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || || ||| | ||||| | |||||| || || || ||||| || || Sbjct 724469 ATCTTCGAGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGGGATACCTTCCTT 724410 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||||| ||||| | || | || |||||| ||| ||||| | ||| || Sbjct 724409 GTCTTGGATCTTTTGCTTGACGTTATCGATAGAGTCAGAGGATTCCACTTCCAAAGTAAT 724350 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| |||||||| | ||| || ||||| || ||||| Sbjct 724349 AGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 724314 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||||| || ||||| ||||| ||||| || || | | |||||| Sbjct 724073 ACGGAGAACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACC 724014 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||||||||| | ||||| | ||| || || || || || || || || Sbjct 724013 ATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATTCCTTCCTT 723954 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||||| || || | || | || |||||| ||| |||||||| || || Sbjct 723953 GTCTTGGATCTTTTGCTTCACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGAT 723894 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| | ||| || || || || ||||| Sbjct 723893 TGTTTTACCAGTCAGGGTCTTGACGAAGATTTGCAT 723858 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||| || ||||||||||| ||||| || || | | || || Sbjct 724301 ACGGAGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCC 724242 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | |||||| ||||| | ||||| | ||| || || || || ||||| || || Sbjct 724241 ATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTT 724182 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||||| || ||| | || | || ||| || ||| ||||| ||||| || Sbjct 724181 GTCTTGGATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGAT 724122 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| ||||| || ||||| || ||||| Sbjct 724121 TGTCTTACCAGTCAAGGTCTTCACAAAGATTTGCAT 724086 Score = 125 bits (138), Expect = 6e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| |||||| || ||||| ||||||||||| || || | || ||||| Sbjct 723389 ACGGAGGACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCC 723330 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||| ||||| || | || | || |||||| || || || || || || || Sbjct 723329 ATCTTCCAATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTT 723270 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | ||||| ||||| | || | | ||| ||| ||| ||||| ||||| || Sbjct 723269 ATCTTGAATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACTTCGAGAGTGAT 723210 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || |||||||| ||||| || || || || ||||| || Sbjct 723209 GGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCATGTT 723171 >seq197 Length=169696 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||||||||| |||||||| ||||| ||||| || || | | ||||| Sbjct 118651 ACGAAGGACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCC 118592 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||| || |||||| | ||||| | ||||||||| || || ||||| || || Sbjct 118591 ATCTTCCAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCAGGGGGGATACCTTCCTT 118532 Query 29691 GTCTTGTAATTTTTGTTTGACA 29712 ||||| | ||||| |||||| Sbjct 118531 ATCTTGGATCTTTTGCTTGACA 118510 >seq2275 Length=1761326 Score = 102 bits (112), Expect = 6e-17 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||| |||||||| ||||||||||| || || | | || || Sbjct 759216 ACGGAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCC 759275 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || |||||||| ||||||||| | || | | ||||||||| || || ||||| || || Sbjct 759276 GTCTTCGAGTTGCTTGCCAGCAAAGATAAGACGTTGCTGATCAGGAGGGATACCTTCCTT 759335 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGA 29729 |||||| | ||||| ||||| | || | || ||| || Sbjct 759336 GTCTTGGATCTTTTGCTTGACGTTGTCGATAGAGTCGGA 759374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385194138842658