Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3262 190 2e-42 seq909 159 3e-33 seq1912 152 4e-31 seq1749 136 3e-26 seq2275 113 3e-19 >seq3262 Length=45897 Score = 190 bits (210), Expect = 2e-42 Identities = 466/698 (67%), Gaps = 29/698 (4%) Strand=Plus/Plus Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 |||| ||||||||||| ||||| | ||||| || | ||||| |||| ||| | | Sbjct 37223 TATCGAAATCTTCACCACCCAAGTGAGTATCACCAGCAGTAGCCAACACTTCGAAGATAC 37282 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 |||| |||| ||||| |||| |||||| ||| |||||||||| |||| | | || | Sbjct 37283 CATCGTCAATAGACAGGAGAGAGACATCAAAGGTACCACCACCCAAATCATAGACGAGCA 37342 Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 | ||| |||| | | ||| || || | |||||| |||| || || ||||| |||| Sbjct 37343 CGTTCTTTTC---ACCATCGTTCTTGTCCAAACCATAGGCAATGGCGGCGGCAGTGGGTT 37399 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431 |||| || || | | || || | |||||| || | || ||||| || |||||||| | Sbjct 37400 CATTGATGATGCGGAGAATGTTCAAACCAGCGATAGTACCAGCATCCTTGGTGGCTTGAC 37459 Query 282432 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAA 282491 ||| | |||||| || || ||||| || || | || |||| || || || |||| Sbjct 37460 GTTGAGCATCGTTGAAGTAAGCAGGTACGGTCACCACAGCATGAGTCACGGTCTTGCCAA 37519 Query 282492 TATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 || || || |||| ||||| || | || | ||| || |||| ||| || | Sbjct 37520 GGTAGGCTTCAGCAGTTTCCTTCATCTTGGTCAACACCATACCAGAGATTTCTTCAGGGG 37579 Query 282552 AATATTGCTTGGATTCATT-TTGATATGATACTTCAAAATATGGTTTATTACCAACATT- 282609 | | |||| || || |||| | |||| ||| ||| | | |||| Sbjct 37580 TAAACACCTTGTTGTCGTTCTTGA-CCGCCACTT----GGATG--TTAGGAGCGCCATTC 37632 Query 282610 ------AATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAA 282663 | ||| || || || | | ||||||||||| | ||| | || ||||| Sbjct 37633 TTGTTCACCAAC-TTGAAGGGGAAGTGCTTCATATCTGACTTGACATCCTTATCGTTAAA 37691 Query 282664 ATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTT--GGATTAACTGCAGCT 282721 | | |||||| | || || |||||||| | || || ||| ||||| | ||| | Sbjct 37692 ACGGCGACCAATAAGACGCTTGGCATCAAACACAG--TTCGTTCAGGATTGGCCGCATAT 37749 Query 282722 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 282781 |||| || || || || ||||| || |||| || ||||| | ||||| || ||| Sbjct 37750 TGATTCTTAGCAGCGTCACCAATAAGTCGTTCATCATCGGTAAAGGCCACATAGGAAGGA 37809 Query 282782 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCA---TTTTGCCATACA 282838 || | |||| |||||| || || |||||||||||||| |||| |||||| ||| Sbjct 37810 GTAATACGATGACCTTGGTCGTTGGCAATAATTTCAACGCGACCATTCTTTTGC---ACA 37866 Query 282839 CCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 || |||||| | || || || |||||||||||||| Sbjct 37867 CCAACACAAGAGTAGGTGGTACCCAAATCAATACCAAT 37904 >seq909 Length=171011 Score = 159 bits (176), Expect = 3e-33 Identities = 464/701 (66%), Gaps = 35/701 (5%) Strand=Plus/Plus Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 |||| ||||||||||| ||||| | |||| || | ||||| |||| || | || Sbjct 110990 TATCGAAATCTTCACCACCCAAGTGTGTATCACCAGCAGTAGCCAACACTTCAAAGATTC 111049 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 |||| || | |||||| |||| |||||| || |||||||||| |||| | | || | Sbjct 111050 CATCATCGATAGACAAGAGAGACACATCAAAAGTACCACCACCCAAATCATAGACGAGCA 111109 Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 ||| | |||| | | ||| || || | |||||| |||| ||| || || || |||| Sbjct 111110 CATGCTTTTC---ACCATCGTTCTTGTCCAAACCATAAGCAATAGCGGCGGCGGTAGGTT 111166 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431 |||| || ||||| | | || | ||| || || | || ||||| || |||||||| | Sbjct 111167 CATTGATGATTCTAATGATGTTCAAACCGGCGATAGTACCAGCATCCTTGGTGGCTTGAC 111226 Query 282432 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAA 282491 ||| | |||||| || || ||||| || || | || |||| || || || |||| Sbjct 111227 GTTGAGCATCGTTGAAGTAAGCAGGTACGGTCACCACAGCATGAGTCACGGGCTTGCCAA 111286 Query 282492 TATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 282549 ||| ||||| || || | ||||| || | | | ||| || |||| ||| || Sbjct 111287 GATA--CGCTTCAGCAGTCTCCTTCATCTTTGTCAGCACCATACCAGAGATTTCTTCAGG 111344 Query 282550 AGAATATTGCTTGGATTCATT-TTGATATGATACTTCAAAATATGGTTTATTACCAACAT 282608 | | | |||| |||||| |||| | |||| ||| ||| || | | Sbjct 111345 GGTAAACACCTTGTTTTCATTCTTGA-CCGCCACTT----GGATG--TTAGGGGCACCGT 111397 Query 282609 T-------AATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTA 282661 | | ||||| ||| || | | |||||||| | | ||| | |||||| Sbjct 111398 TCTTGTTCACCAACTTGAAA-GGGAAGTGCTTCATATCGGCCTTGACATCCTTATCATTA 111456 Query 282662 AAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTT--GGATTAACTGCAG 282719 | | |||||| | ||||| |||||||| | || || ||| || || | ||| Sbjct 111457 TAGCGACGACCAATAAGACGTTTGGCATCAAACACAG--TTCGTTCAGGGTTGGCGGCAT 111514 Query 282720 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTC-TCTGTAAATGAAACATATGAT 282778 ||||| ||||| || || ||||| || |||| ||| || ||||| | ||||| || Sbjct 111515 ATTGATTCTTGGCGGCGTCCCCAATAAGGCGTTC-GTCGTCGGTAAAGGCCACATAAGAA 111573 Query 282779 GGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCA---TTTTGCCAT 282835 ||||| | |||| |||||| ||||| ||||| || || || ||| |||||| Sbjct 111574 GGAGTGATACGATGACCTTGGTCATTGGCAATGATCTCCACCCGTCCATTCTTTTGC--- 111630 Query 282836 ACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 |||||||| ||| | || || || || || |||||||| Sbjct 111631 ACACCTACGCAAGAGTACGTAGTGCCCAAGTCGATACCAAT 111671 >seq1912 Length=588084 Score = 152 bits (168), Expect = 4e-31 Identities = 213/298 (71%), Gaps = 8/298 (3%) Strand=Plus/Minus Query 282179 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 282238 || || | ||| || || ||||||||||| ||||| | ||||| || | ||||| | Sbjct 145262 GTGACCAAACGGTTGTCGAAATCTTCACCACCCAAGTGAGTATCACCAGCAGTAGCCTTG 145203 Query 282239 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATA 282298 |||| || | |||||||||| | ||| |||| |||||| || |||||||||| | Sbjct 145202 ACTTCAAAGATGCCATCTTCAATGGTCAAGAGAGAGACATCAAAAGTACCACCACCCAAA 145143 Query 282299 TCAAAAATAAGTACATTCATTTC----TTTGTCTTGGTTTTTATCAAGACCATACGCAAA 282354 ||||| ||||| || || ||| | ||| || || || | |||||| |||| Sbjct 145142 TCAAAGATAAGCACGTTGTGTTCGCCAGTAGTC----TTCTTGTCCAAACCATAGGCAAT 145087 Query 282355 AGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGC 282414 || || ||||| ||||| || || |||| |||||| || | ||| ||||| || | Sbjct 145086 GGCCGCCGCAGTGGGTTCGTTGATGATTCGCAAAACGTTTAAACCCGCAATGGCACCAGA 145027 Query 282415 ATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCA 282472 |||||| || ||||| | ||| || |||||||| || ||||| ||||| || || ||| Sbjct 145026 ATCTTTGGTTGCTTGGCGTTGAGAGTCGTTAAAGTAAGCAGGGACAGTGATGACCGCA 144969 Score = 107 bits (118), Expect = 1e-17 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 282680 CGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCT 282739 ||||| |||||| | | |||| | ||| | |||| ||| | ||||| ||||| Sbjct 144625 CGTTTAGCATCATAGACAGTACCACCAGCATTCAAAGCAGATTGGTTCTTGGCAGCATCA 144566 Query 282740 CCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 282799 ||||| ||| ||||| || || || | |||| | |||||||||||||| || |||||| Sbjct 144565 CCAATGAGACGTTCTTGGTCAGTGAAGGCAACAAAGGATGGAGTTGTGCGGTTGCCTTGA 144506 Query 282800 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTT 282859 || || ||||| ||||| || | | |||| ||| ||||| || || | ||||| Sbjct 144505 TCGTTGGCAATGATTTCCACACGATCGTTTTCCCACACACCAACGCAGGAGTAGGTTGTA 144446 Query 282860 CCTAAATCAATACC 282873 || ||||||||||| Sbjct 144445 CCCAAATCAATACC 144432 >seq1749 Length=282599 Score = 136 bits (150), Expect = 3e-26 Identities = 275/406 (68%), Gaps = 4/406 (1%) Strand=Plus/Minus Query 281981 AGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAA 282040 ||||||||||| || | ||| | || | | || ||||| ||||||||||| || Sbjct 161602 AGTTCTTCGAAACGGGCACGAGTCAAAGAGGTGTAGTAGTCAATACCTTCGAACAAGGAG 161543 Query 282041 TCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCT 282100 || | |||||| | ||||||| |||||||| | | ||| || ||||||||||| || Sbjct 161542 TCGATTTCAATGGAGGTTTGAGCAGAAGAAGACAAAGTACGCTTCGCACGTTCACAAGCA 161483 Query 282101 GTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTCT 282158 || | || | || | || | | ||| | | ||| | || | || | || Sbjct 161482 GTACGGAGACGACGGACAGCACGGG--GGTTGCCAGAGATATCCTTCTTGAACTTGCGCT 161425 Query 282159 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 282218 |||| |||| | | | || || | ||| || || ||||||||||| ||||| | || Sbjct 161424 TGAATTCTTGGATAAAGTGAGTGACCAAACGGTTGTCGAAATCTTCACCACCCAAGTGAG 161365 Query 282219 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACAT 282278 | | || | ||||| | |||| || | |||||||||| | ||| |||| |||| Sbjct 161364 TGTCACCAGCAGTAGCCTTGACTTCAAAGATACCATCTTCAATGGTCAAGAGAGAGACAT 161305 Query 282279 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTAT 282338 | ||| |||||||||| ||| || || || || ||| |||| || | || || | Sbjct 161304 CGAAGGTACCACCACCCAAATCGAAGATGAGCACGTTCTTTTCACCTTCATCCTTCTTGT 161245 Query 282339 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 282384 | | |||||| |||| ||||| ||||| ||||| || || ||||| Sbjct 161244 CCAAACCATAGGCAATGGCAGCGGCAGTAGGTTCGTTGATGATTCT 161199 >seq2275 Length=1761326 Score = 113 bits (124), Expect = 3e-19 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 282728 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 282787 ||||| ||||| ||||| || ||||| ||||| || | || |||| ||||| ||| Sbjct 1028202 TTGGCAGCATCCCCAATGAGTCGTTCTTGGTCTGTGAAAGCCACGAATGAGGGAGTGGTG 1028143 Query 282788 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847 || ||||||||||| || ||||| |||||||| | | |||||||| ||||| |||||| Sbjct 1028142 CGGTTACCTTGATCGTTGGCAATGATTTCAACACGATCGTTTTGCCAGACACCAACACAA 1028083 Query 282848 CTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 | || || || ||||||||||||| ||| Sbjct 1028082 GAGTAGGTAGTACCCAAATCAATACCAACAGC 1028051 Score = 107 bits (118), Expect = 1e-17 Identities = 243/359 (68%), Gaps = 6/359 (2%) Strand=Plus/Minus Query 282026 CCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTA 282085 ||||| ||||||| || | ||| | || ||||| || || || || | | ||| || Sbjct 1029102 CCTTCATACAAAGAGTCGATTTCCAGAGTGGTTTGCGTGGAGGAGGACAAGGTACGCTTC 1029043 Query 282086 GCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG-GCTTTTGCTGATTGATTCAAATCTG 282143 ||||||||||| || || | ||| | || | || || | || || || || Sbjct 1029042 GCACGTTCACAAGCAGTACGTAGACGGCGCACAGAGCGAGGGTTGCCAGA--CATGTCCT 1028985 Query 282144 TTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTT 282203 | ||| | || | |||||| |||| | | | || || | ||| || || ||||||| Sbjct 1028984 TCTTAAACTTGCGCTTGAATTCTTGGATAAAGTGGGTCACCAAACGGTTGTCGAAATCTT 1028925 Query 282204 CACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAG 282263 |||| ||||| | ||| | || | ||||| | |||| || | |||||||||| | Sbjct 1028924 CACCACCCAAGTGAGTGTCACCAGCAGTAGCCTTGACTTCAAAGATGCCATCTTCAATGG 1028865 Query 282264 ACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC-T 282322 ||| |||| |||||| || |||||||||| |||||| ||||| || || ||| Sbjct 1028864 TCAAGAGAGACACATCAAAAGTACCACCACCCAAATCAAAGATAAGCACGTTGTGTTCGC 1028805 Query 282323 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 ||| | || || || | |||||| |||| ||||| || || |||||||| || || Sbjct 1028804 CAGTCGT-CTTCTTGTCCAAACCATAGGCAATGGCAGCGGCCGTGGGTTCATTGATGAT 1028747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740368326758388