Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq236 136 3e-27 seq3256 123 2e-23 seq3208 111 1e-19 >seq236 Length=318481 Score = 136 bits (150), Expect = 3e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||||| |||||| || ||||| ||||||||||| || Sbjct 112564 ACCACCACGGAGACGGAGAACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGA 112623 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || |||| |||||| |||||||| || | ||| || || ||| | || Sbjct 112624 GAGGGTGCGGCCATCTTCCAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGG 112683 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || || || |||| ||| | || ||| ||||||| Sbjct 112684 AATACCTTCCTTGTCTTGAATCTTTTGCTT-GACATTGTCGATGGAGTCAGAGGATTCCA 112742 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 | |||| ||||| || || ||||| | ||| || || ||||| ||||| || Sbjct 112743 CTTCAAGGGTGATTGTCTTGCCTGTAAGCGTCTTGACGAAGATTTGCATGGT 112794 >seq3256 Length=796958 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || ||||| |||||||| |||||||| || || Sbjct 724313 ACCACCACGGAGACGGAGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGA 724254 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || ||||||||||| || || || |||||||| || || ||| | || Sbjct 724253 GAGCGTACGGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGG 724194 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || || ||| |||| ||| | | ||| ||||||| Sbjct 724193 GATACCTTCCTTGTCTTGGATCTTTTGCTTC-ACATTGTCGATAGAGTCCGAGGATTCCA 724135 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || ||||| || || || || |||||||| |||||| Sbjct 724134 CTTCCAGAGTGATTGTCTTACCAGTCAAGGTCTTCACAAAGATTTGCATA 724085 >seq3208 Length=262556 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 33517 TCGTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAA 33576 || || ||||||| ||||| | |||||| ||||| || || ||||| ||||||||| Sbjct 83831 TCTTCGCCACCTCGTAAACGGAGCACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAA 83890 Query 33577 TCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCT 33636 || ||||| ||||| | || || | |||||| || ||||| || | || ||||| || Sbjct 83891 TCAGAGAGAGTGCGACCATCTTCTAGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCA 83950 Query 33637 TGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA 33695 | || | |||||||| || ||| || || || || | ||| | | ||| || Sbjct 83951 GGAGGGATGCCTTCTTTATCTTGAATCTTTTGCTT-GACGTTGTCGATAGAGTCTGAGGA 84009 Query 33696 TTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||||| || | ||||| || || || || || || || || |||||||||||| Sbjct 84010 TTCCACTTCCAGAGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCATA 84064 Score = 109 bits (120), Expect = 4e-19 Identities = 168/237 (71%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| ||| ||||| || ||||| |||||||| ||||| Sbjct 84064 ACCACCACGAAGACGAAGCACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGA 84123 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||||||| | || || | ||||| |||||||| || | ||||| || || | || Sbjct 84124 GAGTGTGCGGCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGG 84183 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || || || ||||| || | ||| | || ||| ||||||| Sbjct 84184 GATGCCTTCCTTATCTTGGATCTTTTGTTT-GACGTTGTCGATGGAGTCAGAAGATTCCA 84242 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTG 33757 | || | || || || || || || | |||||||||||||| |||||| | |||| Sbjct 84243 CTTCCAATGTAATGGTCTTGCCAGTAAGAGTTTTTACAAAGATTTGCATAATGGGTG 84299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328682615544960