Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3256 123 6e-23 seq236 111 4e-19 seq3208 102 2e-16 seq1528 98.7 2e-15 seq304 95.1 3e-14 >seq3256 Length=796958 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || || || || || || || ||||||||||||||| |||||| Sbjct 724317 CAAATCTTTGTCAAGACCCTGACTGGCAAGACTATTACTTTGGAAGTGGAATCCTCTGAC 724376 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| || ||||||||||| ||||| || ||||| || || ||| ||| Sbjct 724377 TCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAGCAA 724436 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| ||||| |||||| | |||||||| | |||||| | || |||||| || Sbjct 724437 CGTTTGATCTTTGCCGGGAAGCAGCTCGAAGATGGTCGTACTTTGTCTGACTACAACATC 724496 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || ||||| |||||||| || || || Sbjct 724497 CAAAAAGAATCTACTCTCCATCTGGT 724522 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||| | ||||| ||| ||| ||| | |||| || |||||| Sbjct 723198 ACTGGCAAGACCATCACTCTCGAAGTTGAATCTTCCGACTCCATCGACAACGTCAAGCAA 723257 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || |||||||| || ||| ||| |||| ||||||||||| ||| Sbjct 723258 AAGATTCAAGATAAGGAAGGAATCCCCCCAGACCAGCAACGACTCATCTTCGCCGGCAAG 723317 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| | ||| | | || |||||| | || || || ||||||||||| Sbjct 723318 CAATTGGAAGATGGCCGCACTCTTTCTGACTACAACATTCAAAAGGAATCTACTCTTCAT 723377 Query 206374 CTTGT 206378 || || Sbjct 723378 CTGGT 723382 Score = 111 bits (122), Expect = 4e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || ||||| ||||| | ||||||||| |||||| | |||| Sbjct 723872 CAAGACCCTGACTGGTAAAACAATCACCCTTGAAGTGGAATCCTCTGACTCTATCGACAA 723931 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||||||||| ||||| || |||||||| || ||| ||| | | ||||| Sbjct 723932 CGTGAAGCAAAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAACAACGCTTGATCTT 723991 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || || || |||||||||| | || | | || |||||| |||| || || || Sbjct 723992 CGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAACATCCAAAAGGAATC 724051 Query 206364 TACTCTTCACCTTGTT 206379 |||||||||||| ||| Sbjct 724052 TACTCTTCACCTGGTT 724067 Score = 105 bits (116), Expect = 2e-17 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||| ||||||||||| || ||| | |||| || |||||| Sbjct 724110 ACTGGTAAGACAATCACTCTGGAAGTGGAATCCTCGGACTCTATCGACAATGTGAAGCAA 724169 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| || || ||| ||| | | |||||||| || || Sbjct 724170 AAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAACAACGTTTGATCTTCGCTGGTAAA 724229 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| | || | | || |||||| |||| ||||| |||||||||||| Sbjct 724230 CAATTGGAAGATGGCCGTACGCTCTCTGACTACAACATCCAAAAAGAATCTACTCTTCAC 724289 Query 206374 CTTGTT 206379 | ||| Sbjct 724290 TTGGTT 724295 Score = 104 bits (114), Expect = 6e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || || || || |||||| ||||||||||| |||||| Sbjct 723633 CAAATCTTTGTCAAGACTTTGACTGGCAAGACAATCACTCTGGAAGTGGAATCCTCTGAC 723692 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| || ||||||||||| ||||| || ||||| || || || ||| Sbjct 723693 TCTATCGACAATGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCTGATCAGCAA 723752 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||| || || || |||||||||| | ||| | | || |||||| || Sbjct 723753 CGTTTGATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACTCTCTCTGACTACAACATC 723812 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 || || || |||||||||||| | ||| Sbjct 723813 CAAAAGGAATCTACTCTTCACTTGGTT 723839 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || || || || || || |||||||||||| || ||| Sbjct 723405 CAAATCTTTGTCAAGACCTTGACTGGCAAGACCATTACCTTGGAAGTGGAATCCTCCGAC 723464 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| || ||||||||||| ||||| || ||||| || || ||| ||| Sbjct 723465 TCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAACAA 723524 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||| || || || |||||||||| | || | | || |||||| || Sbjct 723525 CGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAACATC 723584 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 || || || ||||||||||| Sbjct 723585 CAAAAGGAATCTACTCTTCA 723604 >seq236 Length=318481 Score = 111 bits (122), Expect = 4e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| ||||| ||||| || || ||||| | ||||||||| |||||| | |||| Sbjct 112777 CAAGACGCTTACAGGCAAGACAATCACCCTTGAAGTGGAATCCTCTGACTCCATCGACAA 112718 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||||||||||||||| || ||||| ||| || ||| ||| | || ||||| Sbjct 112717 TGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAACGTCTCATCTT 112658 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| || || |||||||||| | || | | ||||||||| | || || || || Sbjct 112657 TGCCGGCAAACAACTGGAAGATGGCCGCACCCTCTCTGATTACAACATTCAAAAGGAATC 112598 Query 206364 TACTCTTCA 206372 |||||||| Sbjct 112597 CACTCTTCA 112589 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || || || || || || ||||| | ||||||||| |||||| Sbjct 111976 CAAATCTTTGTCAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTGGAATCCTCTGAC 111917 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| || ||||||||||||||||| |||||||| || || || ||| Sbjct 111916 TCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGATCAACAA 111857 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||| ||||| || || |||||||||| | || | | || |||||| || Sbjct 111856 CGTCTTATCTTTGCCGGTAAACAACTGGAAGATGGCCGCACGCTCTCTGACTACAACATC 111797 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || ||||| || || || ||| Sbjct 111796 CAAAAAGAATCCACCCTGCAC 111776 Score = 84.2 bits (92), Expect = 5e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 206200 AAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATT 206259 || || ||||| | ||||||||| |||||| | |||| || ||||||||||| Sbjct 112177 AAGACCATCACCCTTGAAGTGGAATCCTCTGACTCTATCGACAACGTCAAGCAAAAGATC 112118 Query 206260 CAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTG 206319 ||||| |||||||| || || || ||| | |||||||| || || || || || Sbjct 112117 CAAGATAAAGAAGGCATCCCTCCTGATCAACAACGTCTTATCTTTGCTGGTAAACAACTG 112058 Query 206320 GAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 |||||||| | || | | || |||||| |||| ||||| || || || ||| Sbjct 112057 GAAGATGGCCGCACGCTCTCGGACTACAACATCCAAAAAGAATCCACCCTGCAC 112004 >seq3208 Length=262556 Score = 102 bits (112), Expect = 2e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || || || |||||||||||| ||||||| | |||| Sbjct 84276 AAAACTCTTACTGGCAAGACCATTACATTGGAAGTGGAATCTTCTGACTCCATCGACAAC 84217 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || |||||||| ||||| || ||||| || || ||| || | |||||||| Sbjct 84216 GTCAAACAAAAGATCCAAGATAAGGAAGGCATCCCACCCGACCAACAGCGCCTTATCTTT 84157 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || ||| | |||||||| | || | |||| |||||| | || || || || Sbjct 84156 GCCGGGAAACAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATTCAAAAGGAATCG 84097 Query 206365 ACTCTTCACCTTGT 206378 |||||||| || || Sbjct 84096 ACTCTTCATCTGGT 84083 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || |||||| ||||||||||| || ||| Sbjct 84060 CAGATCTTCGTCAAGACTTTGACTGGCAAGACTATCACTCTGGAAGTGGAATCCTCAGAC 84001 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| || ||||||||||||||||| |||||||| || || ||| ||| Sbjct 84000 TCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGACCAGCAA 83941 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| || || || || | |||||||| | ||| | | ||||||||| || Sbjct 83940 CGGCTCATCTTTGCAGGCAAACAACTAGAAGATGGTCGCACTCTCTCTGATTACAACATC 83881 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || || || || || || ||| Sbjct 83880 CAAAAGGAATCAACCCTACAC 83860 >seq1528 Length=6275 Score = 98.7 bits (108), Expect = 2e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||||||||||| ||||| || ||||| ||| || || ||| | ||||||||| Sbjct 4383 GTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCTCCTGATCAGCAACGTCTTATCTTC 4442 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| | |||||||| | |||||| |||| |||||| |||| || || || Sbjct 4443 GCTGGCAAGCAACTCGAAGATGGTCGCACTTTGTCCGACTACAACATCCAAAAGGAATCC 4502 Query 206365 ACTCTTCAC 206373 ||||||||| Sbjct 4503 ACTCTTCAC 4511 >seq304 Length=62727 Score = 95.1 bits (104), Expect = 3e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 206223 AAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282 ||| |||||| | |||| || ||||||||||||||||| || ||||| ||| || Sbjct 38996 AAGCTCTGACTCGATCGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCC 38937 Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342 || ||| | |||||||| ||||| ||||| | |||||||| | || ||| |||| Sbjct 38936 TGATCAGCAACGTCTTATCTTTGCCGGCAAGCAACTCGAAGATGGCCGTACGTTGTCCGA 38877 Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 |||||| |||| || || || ||||| || Sbjct 38876 CTACAACATCCAAAAGGAATCCACTCTCCA 38847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181739971582298