Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq236 111 1e-19 seq3208 102 8e-17 seq304 87.8 2e-12 seq3256 84.2 2e-11 >seq236 Length=318481 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | || |||||||| ||||||||||| | || || |||||| Sbjct 111771 ACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCC 111830 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || |||||||||| | |||| ||||| |||||||| ||||| |||||||||||||| | Sbjct 111831 AGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCTTGA 111890 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||||| || | | || | || || | | |||||||| | || | || || Sbjct 111891 ATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTG 111950 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | || || ||||| Sbjct 111951 CCAGTCAGGGTCTTGACAAAGATTTGCAT 111979 Score = 93.3 bits (102), Expect = 4e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | || |||||||| ||||||||||| | || || |||||| Sbjct 111999 ACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCTTCC 112058 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 || |||||||| | | |||| ||||| |||||||| ||||| |||||||||||||| Sbjct 112059 AGTTGTTTACCAGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATC 112114 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | | || || |||||||||||||| || | ||| || |||||| Sbjct 112582 AACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTC 112641 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || ||||| |||| | |||| ||||| ||||| |||||||| || ||||| || || Sbjct 112642 CAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG 112701 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| ||||| || | | || | | || | | |||||||| | || | || || Sbjct 112702 AATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTT 112761 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || || || || | ||| || |||||| Sbjct 112762 GCCTGTAAGCGTCTTGACGAAGATTTGCATG 112792 >seq3208 Length=262556 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || |||||||||||||||||| | || || |||||| |||||||| |||| | Sbjct 84098 GATTCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGTTTCCCGGCA 84157 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || |||||||| || || || |||||||| ||||| || |||||||| | Sbjct 84158 AAGATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTATCTTGGATCTTTTGTTTGACG 84217 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | | || | | |||||||| | || | || || ||||| ||||||||| Sbjct 84218 TTGTCGATGGAGTCAGAAGATTCCACTTCCAATGTAATGGTCTTGCCAGTAAGAGTTTTT 84277 Query 132110 ATGAAAATCTGCAT 132123 | || || ||||| Sbjct 84278 ACAAAGATTTGCAT 84291 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| |||| | |||| || ||||| |||||||| || | || || |||||| Sbjct 83855 ACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCT 83914 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || ||||| || | | |||| || || || || || ||||| |||||||||||||| | Sbjct 83915 AGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCTTGA 83974 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||||| || | | || | || || | | |||||||| | || | || || Sbjct 83975 ATCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTGATAGTCTTG 84034 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| ||| || | ||| |||||||| Sbjct 84035 CCAGTCAAAGTCTTGACGAAGATCTGCAT 84063 >seq304 Length=62727 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | || || ||||| |||||||||||| || ||||| ||||||| Sbjct 38841 ACCAAATGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAACGTACGGCCATCTTCG 38900 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || || || |||| | |||| ||||| || ||||| ||||| || ||||| || || | Sbjct 38901 AGTTGCTTGCCGGCAAAGATAAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGA 38960 Query 132035 ATTTTTTGTTT 132045 || ||||| || Sbjct 38961 ATCTTTTGCTT 38971 >seq3256 Length=796958 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || |||||||| ||||||||||| || ||||| |||||||||||| || |||| | Sbjct 724507 GATTCTTTTTGGATGTTGTAGTCAGACAAAGTACGACCATCTTCGAGCTGCTTCCCGGCA 724448 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | ||| || || ||||| || || ||||| || || || ||||| || | Sbjct 724447 AAGATCAAACGTTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGGATCTTTTGCTTGACG 724388 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | | |||||||| | || | || || |||||||| || || Sbjct 724387 TTATCGATAGAGTCAGAGGATTCCACTTCCAAAGTAATAGTCTTGCCAGTCAGGGTCTTG 724328 Query 132110 ATGAAAATCTGCAT 132123 | || || ||||| Sbjct 724327 ACAAAGATTTGCAT 724314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476579398117680