Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3208 100 3e-16 seq236 96.9 3e-15 seq2275 91.5 1e-13 seq3256 84.2 2e-11 >seq3208 Length=262556 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || || || || || | ||||| | ||||| ||| || Sbjct 84063 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACTATCACTCTGGAAGTGGAATCCTCA 84004 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||||| | || || ||||| ||| |||||||| || || || || || ||| Sbjct 84003 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGACCAG 83944 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | ||||| | | ||||||||||| ||||||| | | | | || |||||||| Sbjct 83943 CAACGGCTCATCTTTGCAGGCAAACAACTAGAAGATGGTCGCACTCTCTCTGATTACAAC 83884 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTG 25384 || ||||| ||||| ||| | || || ||| Sbjct 83883 ATCCAAAAGGAATCAACCCTACACTTGGTG 83854 >seq236 Length=318481 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 || ||||||| | || || || || | || || || | ||||| | ||||| ||| | Sbjct 112795 CACCATGCAAATCTTCGTCAAGACGCTTACAGGCAAGACAATCACCCTTGAAGTGGAATC 112736 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | || | ||||| | || || ||||| ||| || || || ||||| || || || Sbjct 112735 CTCTGACTCCATCGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCAGA 112676 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 || ||| | ||||| | | |||||||||||| ||||||| | | || ||||| Sbjct 112675 CCAACAACGTCTCATCTTTGCCGGCAAACAACTGGAAGATGGCCGCACCCTCTCTGATTA 112616 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||| |||||||| |||||||| ||||||| || Sbjct 112615 CAACATTCAAAAGGAATCCACTCTTCATTTGGT 112583 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | || || || | ||||| | ||||| ||| || Sbjct 111979 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 111920 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||||| | || || ||||| ||| |||||||| || || || || ||||| Sbjct 111919 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGATCAA 111860 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | || || | | ||| |||||||| ||||||| | | || || ||||| Sbjct 111859 CAACGTCTTATCTTTGCCGGTAAACAACTGGAAGATGGCCGCACGCTCTCTGACTACAAC 111800 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 || ||||||||||||||| | || || || Sbjct 111799 ATCCAAAAAGAATCCACCCTGCACTTGGT 111771 >seq2275 Length=1761326 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 110045 ACACGTTTTTCGAAAAAATTAGTTTTGCCCTCGAGAGATATATTATTCATAAACTCGAAA 110104 ||||||||||| ||||| || |||||||| | |||||| || || |||||| ||||| Sbjct 1159339 ACACGTTTTTCAAAAAAGTTGGTTTTGCCTTGGAGAGAGATCAGATCCATAAAGTCGAAG 1159398 Query 110105 GGATTGACAGTGTTAAAGTGTTTGTCGTAGCCCAATTCGAATAGCAATCGATCCGCCACA 110164 || ||| | || |||| || || | |||| ||| || | ||||| || || Sbjct 1159399 GGGTTGGTGGATTTGTAGTGCTTCTCTTGACCCAGAGCGACCAGAAGGCGATCGGCGACG 1159458 Query 110165 AATTCAATATACTCGCACATGGACTGTACGTTCATGCCTAACATGGCAACTGGTAGAGCG 110224 ||||| || || | |||||| || |||||| || | | ||| || || |||||| Sbjct 1159459 AATTCGATGTATTGGCACATAAGCTTGGAGTTCATACCGATAAGGGCGACAGGAAGAGCG 1159518 Query 110225 GTAGTaaaaaaaTCCTTTTCAATGTCGACAGCCTCTAC 110262 || || || |||| ||| ||| |||| || || || Sbjct 1159519 TCGGTCAAGAATTCCTGTTCGATGGCGACGGCTTCGAC 1159556 >seq3256 Length=796958 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || || || || || | || || | ||||| ||| || | Sbjct 723402 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATTACCTTGGAAGTGGAATCCTCC 723461 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||||| | || || ||||| || || || || ||||| || || || || Sbjct 723462 GACTCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAA 723521 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | || | || ||||||||||| ||||||| | | | || || ||||| Sbjct 723522 CAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAAC 723581 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 || ||||| ||||| || ||||||| || Sbjct 723582 ATCCAAAAGGAATCTACTCTTCATTTGGT 723610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445064701076160