Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq3208 116 3e-21 seq3256 107 2e-18 seq236 102 7e-17 >seq3208 Length=262556 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || || || |||||||||||||| || || ||||| ||| || Sbjct 84063 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACTATCACTCTGGAAGTGGAATCCTCA 84004 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || ||| | | | | || || ||||| ||| || ||||||||| | || ||| || Sbjct 84003 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGACCAG 83944 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| |||| || | ||| ||||||||| |||||||| | ||| | ||||||||| Sbjct 83943 CAACGGCTCATCTTTGCAGGCAAACAACTAGAAGATGGTCGCACTCTCTCTGATTACAAC 83884 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| ||||| || ||||| || || | | |||||||| || Sbjct 83883 ATCCAAAAGGAATCAACCCTACACTTGGTGCTCCGTTTACGAGGTGG 83837 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||| | ||||||||||||||||| ||||| ||| | Sbjct 84291 ATGCAAATCTTTGTAAAAACTCTTACTGGCAAGACCATTACATTGGAAGTGGAATCTTCT 84232 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || | | | | || |||||||| || || || |||||| | || || ||| Sbjct 84231 GACTCCATCGACAACGTCAAACAAAAGATCCAAGATAAGGAAGGCATCCCACCCGACCAA 84172 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 || | ||||| | ||| || ||||| | |||||| | | ||| | ||| |||| Sbjct 84171 CAGCGCCTTATCTTTGCCGGGAAACAGCTTGAAGATGGCCGCACACTCT--CCGACTACA 84114 Query 106438 ACATACAAAAAGAATCTACACTACAT 106463 |||| ||||| ||||| || || ||| Sbjct 84113 ACATTCAAAAGGAATCGACTCTTCAT 84088 >seq3256 Length=796958 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || ||||||||||||||||||||| ||||| ||| || | Sbjct 723402 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATTACCTTGGAAGTGGAATCCTCC 723461 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || ||| | | | || || ||||| || ||||| ||||| | ||| || ||| Sbjct 723462 GACTCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAA 723521 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | || ||||||||| | |||||| | || | || |||||| Sbjct 723522 CAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAAC 723581 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || ||||| |||||||| || ||||| || Sbjct 723582 ATCCAAAAGGAATCTACTCTTCATTTGGT 723610 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || |||||||||||||| || || ||||| ||| || Sbjct 723630 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACAATCACTCTGGAAGTGGAATCCTCT 723689 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || ||| | | | | ||||| ||||| || ||||| ||||| | ||| |||||| Sbjct 723690 GACTCTATCGACAATGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCTGATCAG 723749 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | || || |||||| | |||||| ||| | || |||||| Sbjct 723750 CAACGTTTGATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACTCTCTCTGACTACAAC 723809 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || ||||| |||||||| || || || || Sbjct 723810 ATCCAAAAGGAATCTACTCTTCACTTGGT 723838 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || |||||||| ||||| || || ||||| ||| || Sbjct 724086 ATGCAAATCTTTGTGAAGACCTTGACTGGTAAGACAATCACTCTGGAAGTGGAATCCTCG 724145 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || ||| | | | | ||||| ||||| || ||||| ||||| | ||| || ||| Sbjct 724146 GACTCTATCGACAATGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAA 724205 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | || || |||||||| |||||| || | || |||||| Sbjct 724206 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCCGTACGCTCTCTGACTACAAC 724265 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || |||||||||||||| || || || || Sbjct 724266 ATCCAAAAAGAATCTACTCTTCACTTGGT 724294 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || ||||||||||||| ||||| ||||| ||| || Sbjct 724314 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACTATTACTTTGGAAGTGGAATCCTCT 724373 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || ||| | | | || || ||||| || ||||| ||||| | ||| || || Sbjct 724374 GACTCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 724433 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| || || || | |||||| | ||| || || |||||| Sbjct 724434 CAACGTTTGATCTTTGCCGGGAAGCAGCTCGAAGATGGTCGTACTTTGTCTGACTACAAC 724493 Query 106440 ATACAAAAAGAATCTACACTACAT 106463 || |||||||||||||| || ||| Sbjct 724494 ATCCAAAAAGAATCTACTCTCCAT 724517 >seq236 Length=318481 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || ||||||||||||| || ||| | ||| ||| || Sbjct 111979 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 111920 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || ||| | | | | || || ||||| ||| || ||||||||| | || ||||||| Sbjct 111919 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGATCAA 111860 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||| | ||| || |||||| | |||||| || | || |||||| Sbjct 111859 CAACGTCTTATCTTTGCCGGTAAACAACTGGAAGATGGCCGCACGCTCTCTGACTACAAC 111800 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || ||||||||||| || || || || || Sbjct 111799 ATCCAAAAAGAATCCACCCTGCACTTGGT 111771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402303425693504