Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq209 176 7e-39 seq2869 163 4e-35 >seq209 Length=213014 Score = 176 bits (194), Expect = 7e-39 Identities = 364/538 (68%), Gaps = 4/538 (1%) Strand=Plus/Minus Query 161160 AAGTAGAACCTGATGAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCG 161219 |||| |||| ||| ||||||||| | || || || ||| || || || ||||| | Sbjct 63018 AAGTCCAACCCACTGAAATCTACAACTTGGGTGCCCAATCTCACGTCAAGGTGTCTTTTG 62959 Query 161220 AGGAACCTGAATATACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAG 161279 | ||||||| || | | |||||||| || || | | || |||| || Sbjct 62958 ATATGTCTGAATACACTGGTGATGTCGATGCTCTCGGTACTTTGCGTTTACTGGATGCCA 62899 Query 161280 TTCGTCTCCTAGGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGT 161339 | || | ||| |||||||| | || ||| ||||||| || ||||| ||| || | Sbjct 62898 TCCGAACCTGTGGTTTGACAGATCGTGTGCGTTTCTACCAAGCCTCCACTTCTGAATTAT 62839 Query 161340 ATGGGTTGGTACAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCAT 161399 |||| ||| || || || || || ||||| || || |||||||| || ||||| | Sbjct 62838 ATGGTAAAGTAGTGGAAACCCCTCAAAAGGAAACCACCCCCTTCTACCCTCGCTCTCCTT 62779 Query 161400 ATGGCGTAGCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGA 161459 |||| || || || |||||||| || |||||||| |||||| | || || | Sbjct 62778 ATGGTGTGGCCAAGCTCTATGGTTACTGGATTGTCGTCAACTACCGTGAATCATACAACA 62719 Query 161460 TGCACGCCAGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCG 161519 || ||||| ||| ||||| || |||||||| || || || || || || || || | Sbjct 62718 TGTACGCCTGTAACGGTATCCTCTTCAACCACGAATCCCCTCGCCGTGGCCGTACCTTTG 62659 Query 161520 TAACCCGTAAGATTACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTAT 161579 | ||||||||||| | | || | | ||| | || | || || ||||| | Sbjct 62658 TGACCCGTAAGATCTCCAAGGCTGTGGCTGATATCCATCTTGGTCGTCAAGACTGTCTCT 62599 Query 161580 ACCTAGGTA--ATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGC 161637 |||| |||| ||| | || ||| || ||||||||||||||| ||||| || || | Sbjct 62598 ACCTCGGTAACATCGATGCT-AAG-CGTGATTGGGGTCATGCTCGGGACTACGTTGAAGG 62541 Query 161638 TATGTGGTTGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAA 161695 |||||| ||||||| ||||| || ||||| |||| |||| | ||||| ||| || Sbjct 62540 CATGTGGCTGATGTTGCAACAAGATCAACCTGAAGACTTTGTGTTGGCCACTGGTGAA 62483 >seq2869 Length=18354 Score = 163 bits (180), Expect = 4e-35 Identities = 312/454 (69%), Gaps = 8/454 (2%) Strand=Plus/Minus Query 161246 GATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTAGGTATGACAGATAGG 161305 |||||||| || ||||| || || | || || ||||| | || |||| ||| | Sbjct 10347 GATGCTCTTGGTACCCTTCGATTACTAGATGCGATTCGTACCTGTGGCCTGACCGATCGT 10288 Query 161306 GTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAG 161365 || || ||||||| || || ||| ||| |||| || ||| ||||| || || Sbjct 10287 GTGCGATTCTACCAAGCGTCGACCTCTGAACTGTACGGCAAAGTAGTGGAGACCCCCCAA 10228 Query 161366 AAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATAT 161425 || ||||| || || |||||||| || ||||||||||| || || || |||||||| || Sbjct 10227 AAGGAAACCACCCCCTTCTACCCCCGCTCTCCATATGGTGTGGCCAAGCTCTATGGTTAC 10168 Query 161426 TGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTC 161485 ||||| || |||||| | || ||| ||| | ||| ||| ||||| || ||| Sbjct 10167 TGGATCGTCGTGAACTATCGTGAATCTTACAACATGTATGCCTGTAACGGTATCCTCTTC 10108 Query 161486 AACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACTAGGGGACTA 161545 |||||||| || || || || || || || || ||||| ||||| || | | || Sbjct 10107 AACCATGAATCCCCTCGTCGTGGCCGTACCTTTGTCACCCGCAAGATCTCTCGTG--CTG 10050 Query 161546 TCCCG--TATTAGTACAGGACTACAGGATTGTCTATACCTAGGTA--ATCTAAACTCAAG 161601 | || ||| | || | || || || || || || || | ||| | | |||| Sbjct 10049 TGGCGGATATCCATCTCGGTCGTCAAGAGTGCCTTTATCTCGGCAACATCGATGC-CAAG 9991 Query 161602 ACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACAGGA 161661 || ||||||||||||||| ||||||||||| | ||||||| ||||||| ||||| || Sbjct 9990 -CGTGATTGGGGTCATGCTCGGGACTATGTGGAAGGTATGTGGCTGATGTTGCAACAAGA 9932 Query 161662 AACTCCTGATGACTATGTGATTGCCACAGGTAAA 161695 ||||| |||| ||| | || || ||| || Sbjct 9931 TCAACCTGACGACTTTGTCTTGGCTACCGGTGAA 9898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729880895447440