Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1090 149 5e-31 seq236 113 4e-20 seq3256 109 5e-19 seq3208 109 5e-19 >seq1090 Length=283134 Score = 149 bits (164), Expect = 5e-31 Identities = 568/884 (64%), Gaps = 27/884 (3%) Strand=Plus/Minus Query 131375 ACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAAATTTTGTTGATTGCTTTTA 131434 |||||||||| |||| || |||| || || || |||| ||||||||||| || Sbjct 229709 ACAATTTCGGTACACAGGTTGCTGCATTTGATAGTTCCCAGGTTTTGTTGATTAGACTT- 229651 Query 131435 GCATTCACATGG-TCCTTGTACATCATGTAGGGCGTGCCCGTTTCGACTTGAGTTTCAAT 131493 || | ||||| |||||||| | |||| |||| | || ||||| ||||| ||| | Sbjct 229650 GCGGTTACATGCATCCTTGTAAAGCATGAAGGGGTTCCCAGTTTCAGTTTGAGCTTCCAA 229591 Query 131494 AATG---TATCGAAAGAGTTTTCGAGCAGACAATTGATA-TTTGTATTG-GCCGCGTTT- 131547 |||| || | | || ||| |||| ||||| |||| || || || || Sbjct 229590 AATGGCATACC---ACAGCTTTTGAGCC-----TTGATCGTTTGACGTGCGCGGCCTTCC 229539 Query 131548 --TTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACTGTCCAAATTGGGA 131605 ||| || ||||| | | || || || | | || || | | ||| ||| Sbjct 229538 CGTTCATATTTTTCAAAAAGCGCCTCGAATTCGTCACCCCACACATCTTGTAAACCAGGA 229479 Query 131606 CATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAA 131665 |||||| ||||| | || ||||| | || || ||| || |||||||| || | | Sbjct 229478 GCTTCGCTAGGACAAAACAGGGACCATTCACCATTGGCTTCCACACGCTTCATGAAGAGA 229419 Query 131666 TCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtt 131725 || || | ||| | || || || ||||| | ||| | || ||| | || | | | Sbjct 229418 TCAGGGATCCAGAGAGCATAGAAGAGATCACGAGCCCGGATTTCGTCTTTGCCGACATTC 229359 Query 131726 tttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATT 131785 || | || |||||| || | || |||||||| ||||| | ||||| || | Sbjct 229358 TTGCGGAGATCCAAAAAGGTGAAGACATCAGCATGCCAAGGTTCAAGATACATGGCGAAA 229299 Query 131786 GCGCC------TTTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACG 131839 || || |||| || || ||||||| |||| |||| | |||||||| | || Sbjct 229298 GCACCAGGTCGTTTG---TTGCCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACA 229242 Query 131840 CGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTG 131899 || | ||| || | ||| |||| || || || || | ||||||| |||| || Sbjct 229241 CGGAGCATAGGAAGAATACCATTGGAGTAGCCGTTTGTACCAGCAATGTAGGAGCCAGTG 229182 Query 131900 GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCAT 131959 || | ||| ||||| | |||||| || || || || || ||| |||||| | || || Sbjct 229181 GCACGGATGTTGTGGATGTTGAGCCCGATCCCGCCTGCGGTTTTTGAGATTTGCGCACAG 229122 Query 131960 TTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAA 132019 | || || | ||||| ||||| | | ||| | ||| || || |||||| Sbjct 229121 ACCTTCAGTGTTTCGTAGATGCCTTCAATGGAGTCTTCCTTCATGGTGAGCAAGAAGCAA 229062 Query 132020 GAGGACAACTGTTGGTGAAATGTGCCGGCTGAAAACAATGTGGGGCTGGCGTGTGTAAAA 132079 ||||| | ||| | || || ||||| || || || || |||||||| || || Sbjct 229061 GAGGAGAGCTGAGGACGAGGAGTACCGGCATTGAATAAGGTTGGACTGGCGTGGGTGAAG 229002 Query 132080 AGTTTTTTGGCCATGCACCGATACGATTGTATAGCGGACTCGATATCGCCCAGATGTATG 132139 |||| | |||| || | || ||||| || |||||||| | ||| || Sbjct 229001 TACTTTTCCGACATGAGATTGTAGGTTTCGATAGCCGAGTCGATATCTTCGCCATGAATA 228942 Query 132140 GTCAATGCGACCCGCATGTACATGTGTTGAATGCGCTCGGCCGTTTTGCCGTCGATTTTG 132199 || || || |||||| | |||||| || || ||| |||||||| |||||| Sbjct 228941 CCCACGGCCACACGCATGATAAGATGTTGAGGACGTTCCGCCACTTTGCCGTTGATTTTC 228882 Query 132200 ATCAAATAACCGTTTTCCAAAGTTTTGAAACCAAAATATTTGTA 132243 | | |||| | ||||||||| ||||||||||| || ||||| Sbjct 228881 AAAAGATAAGAGCGTTCCAAAGTCTTGAAACCAAAGTAGTTGTA 228838 Score = 89.7 bits (98), Expect = 4e-13 Identities = 209/315 (66%), Gaps = 3/315 (1%) Strand=Plus/Minus Query 130759 GATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAA 130818 |||||| || |||||||| ||||| || | ||| | |||| ||| | ||||| || Sbjct 230319 GATTTGGAATTCACCAGCGAGGACACGACGGGTGTAGAGGTTGGAGGTGTAAGGTTCGAA 230260 Query 130819 GGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAG 130878 | |||||||| ||||| ||||| | || | || |||||||| ||| || | || Sbjct 230259 GCATTCGTTGAAGCCGAGGATTTGCGAGGTGGAAGCTGTGGGCATAGGTGCAACAAGCAG 230200 Query 130879 AGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGA 130938 || || || | |||||| |||| || ||||| | |||| ||||| ||| Sbjct 230199 GGAGTTGCGGACACCGTGTTGGCTGATCTTGGCTTTCAAAGCGGCCCAGTCCCAAAGATC 230140 Query 130939 GGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGA 130998 ||||||| ||||| |||||| || |||| || |||| || | | |||||| Sbjct 230139 GGTAGGTGTGACACC---CCACATGTCGTATTGGAGGTTGCCCTTGGAGACAGGACTGCC 230083 Query 130999 TTCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCC 131058 || | | | ||| || || || |||||| ||| |||||||||||| | Sbjct 230082 TTGGTATGTTTCATAAGCACCGTCTTGTTGAGCCAATTCGCATGACGCTTCCAAAGCTGC 230023 Query 131059 GTAATAAATGGTTTC 131073 || || |||||||| Sbjct 230022 ATAGTAGATGGTTTC 230008 >seq236 Length=318481 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || |||||||| || |||||||| | |||| | ||||| Sbjct 111771 ACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCC 111830 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || ||||||||||| | || ||||| |||||||| || || | || |||||||| Sbjct 111831 AGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCTTGA 111890 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | || | | | || | || ||| | || ||| ||||| || || || | ||| Sbjct 111891 ATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTG 111950 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || || ||||||||||||||| Sbjct 111951 CCAGTCAGGGTCTTGACAAAGATTTGCATA 111980 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || || |||||||| ||||| || | | |||| | ||||| Sbjct 112583 ACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCC 112642 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || ||||| ||||| | |||||||| ||||| || || || | ||| || || || Sbjct 112643 AGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 112702 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | || | | || | | ||| | || ||| ||||| || || || | ||| Sbjct 112703 ATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTG 112762 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || || ||||||||||| Sbjct 112763 CCTGTAAGCGTCTTGACGAAGATTTGCAT 112791 >seq3256 Length=796958 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || ||||| || |||||||| | |||| | ||||| Sbjct 723838 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCC 723779 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || |||||||| ||| | || | ||| || ||||| || || | ||| || || || | Sbjct 723778 AGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGGGGGATACCTTCCTTGTCTTGG 723719 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | |||| | || | || ||| | || ||| ||||| ||||| || | ||| Sbjct 723718 ATCTTTTGCTTCACATTGTCGATAGAGTCAGAGGATTCCACTTCCAGAGTGATTGTCTTG 723659 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| ||| || ||||||||||||||| Sbjct 723658 CCAGTCAAAGTCTTGACAAAGATTTGCATA 723629 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||| ||| | ||||| |||||||| || |||||||| || | || | |||||| Sbjct 724522 ACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAAAGTACGACCATCTTCG 724463 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || ||||| | || | ||| || || || || || | ||| || || || | Sbjct 724462 AGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGG 724403 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | || | | | || | || ||| | || ||| ||||| | ||| |||| ||| Sbjct 724402 ATCTTTTGCTTGACGTTATCGATAGAGTCAGAGGATTCCACTTCCAAAGTAATAGTCTTG 724343 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || || ||||||||||||||| Sbjct 724342 CCAGTCAGGGTCTTGACAAAGATTTGCATA 724313 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| |||||||| || |||||||| | | || | ||||| Sbjct 724294 ACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCCATCTTCC 724235 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | |||||||| ||| | || | ||| ||||| || || || | ||| || || || | Sbjct 724234 AATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTGG 724175 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | |||| | || | || ||| | || ||| ||||| ||||| || | || Sbjct 724174 ATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGATTGTCTTA 724115 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || |||||||||||||||||| Sbjct 724114 CCAGTCAAGGTCTTCACAAAGATTTGCATA 724085 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | ||||| || ||||| || |||||||| | |||| | ||||| Sbjct 723610 ACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTCC 723551 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || ||||| || ||| | || | || ||||| || || || | ||| || || || | Sbjct 723550 AGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTGG 723491 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | || | | | || | || ||| | || ||| ||||| | || || | ||| Sbjct 723490 ATCTTTTGCTTGACGTTATCGATAGAGTCGGAGGATTCCACTTCCAAGGTAATGGTCTTG 723431 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || || ||||||||||||||| Sbjct 723430 CCAGTCAAGGTCTTGACAAAGATTTGCATA 723401 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || ||||| || |||||||| | |||| | ||||| || ||||| || Sbjct 724054 GTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTCCAGTTGTTTGCCA 723995 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || | || ||||| || || || | || || || || |||||| | ||| Sbjct 723994 GCGAAGATCAAGCGTTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTGGATCTTTTGCTTC 723935 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || ||| | || ||| ||||| || || || | ||| || ||||| || Sbjct 723934 ACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTTTTACCAGTCAGGGTC 723875 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 723874 TTGACGAAGATTTGCATA 723857 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||| ||| | ||||| || |||||||| |||||||| | |||| | ||||| Sbjct 723382 ACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 723323 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | || || |||||| | ||||| || || || || || || | || || ||||| Sbjct 723322 AATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTTATCTTGA 723263 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | || | | | || | | ||| | | ||||||||| ||||| || | ||| Sbjct 723262 ATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTG 723203 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| || || || ||||||||||| Sbjct 723202 CCAGTCAAGGTCTTGACGAAGATTTGCAT 723174 >seq3208 Length=262556 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||| ||| | || || || |||||||| ||||||||| | |||| | ||||| Sbjct 84083 ACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCA 84142 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| ||||| | || || |||||||| || || || | || || ||||| | Sbjct 84143 AGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTATCTTGG 84202 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | ||| | | | || | | ||| | | ||| ||||| | || || | ||| Sbjct 84203 ATCTTTTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCACTTCCAATGTAATGGTCTTG 84262 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || |||||||| ||||||||||||||| Sbjct 84263 CCAGTAAGAGTTTTTACAAAGATTTGCATA 84292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424906755095856