Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2275 84.2 7e-11 seq319 84.2 7e-11 >seq2275 Length=1761326 Score = 84.2 bits (92), Expect = 7e-11 Identities = 117/163 (72%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||| | ||| ||||| ||||| ||||||| || ||||| | || || || || | Sbjct 1159776 CTTTGCCGAACGACTTGTCGCCTTTGCTGCTGTTGAAGGTATCTTCTTCTCTGGT-GCAT 1159718 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | ||||| ||||| ||| | || |||||||| | |||| || ||||||| |||| Sbjct 1159717 TCGCCTCTATCTTTTGGCTCAAGAAGCGTGGTTTGATGCCTGGCTTGACCTTCTCCAACG 1159658 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861 |||||||||| || ||||| || | || |||||| ||||| Sbjct 1159657 AACTGATCAGCCGAGACGAAGGCCTTCACACCGACTTTGCCTG 1159615 >seq319 Length=278629 Score = 84.2 bits (92), Expect = 7e-11 Identities = 113/156 (72%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 443706 GAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTC 443765 ||||| || ||||| ||||||| || ||||| | || || ||| || || ||||| Sbjct 176594 GAGCGTCTTGTCGCCTTTGCTGCCGTGGAAGGTATCTTCTTCT-CGGGTGCCTTTGCCTC 176536 Query 443766 CATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGAT 443825 |||||| ||| | || || ||||| || |||| ||| ||||||| |||||||| || Sbjct 176535 CATCTTTTGGCTCAAGAAACGTGGCCTGATGCCTGGTTTGACCTTCTCCAACGAACTCAT 176476 Query 443826 CAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861 ||| | ||||| || | || ||| |||||||| Sbjct 176475 CAGCAGAGACGAAGGCCTCCACACCGATTTCGCCTG 176440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588227368737410