Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1090 268 1e-66 seq3304 96.9 4e-15 seq319 93.3 5e-14 >seq1090 Length=283134 Score = 268 bits (296), Expect = 1e-66 Identities = 1064/1653 (64%), Gaps = 50/1653 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||| ||||| || ||||||||||||| ||||| |||| | ||||| || | Sbjct 230630 CGGAGGTAATACATGCCGGTCTTGAGCCCCTTTTTCCATCCATAAAAGTGCATACTGGTC 230571 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | | | || | ||||||| |||| ||||| ||| ||||| ||| Sbjct 230570 AGCTTGCCAAAGTTAGGGACACCGATGAAGATATTCAAGCTTTGACTTTGGTCGATAAAG 230511 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTCCT 118015 |||||||| || ||||||||||| | | | | | ||||||||| || ||| | Sbjct 230510 GCCCCCCGATCAGCGGCCATATCAATGAGTGTGCGTTG-CGAGATTTCCCATACCGTCTT 230452 Query 118016 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCAC---CCGC 118072 ||| | || | || ||| ||||| | | ||| || || | || |||| | | Sbjct 230451 GTACATTGCTTTGAGATGATCCGGGATGTTCTGGATGTTCTGTACCGAGCCACTGTCAGA 230392 Query 118073 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132 | ||| || | | ||| || || | ||||| || | || || || Sbjct 230391 CATGA---TGCGGTTCTTGATGTCTTCGTTCCAGATGCCGAG---TTCGACCAAGTCTTT 230338 Query 118133 GAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATT 118189 ||| || | ||||| | || ||||| |||||| || | |||| || Sbjct 230337 GAGGAGCCAAGGGTTGACGATTTGGAATTCACCAGCGAGGACACGACGGGTGTAGAGGTT 230278 Query 118190 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 118249 || ||||| || || ||||| || ||| || | |||||| | ||||| |||||||| Sbjct 230277 GGAGGTGTAAGGTTCGAAGCATTCGTTGAAGCCGAGGATTTGCGAGGTGGAAGCTGTGGG 230218 Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGC 118309 ||| ||||| | || ||| ||| |||| ||| | || || || | || | ||| Sbjct 230217 CATAGGTGCAACAAGCAGGGAGTTGCGGACACCGTGTTGGCTGATCTTGGCTTTCAAAGC 230158 Query 118310 GTCCCAGTCGTAG---TTG--AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATA 118364 | ||||||| | | | || | || | |||| |||| || | |||||| | Sbjct 230157 GGCCCAGTCCCAAAGATCGGTAGGTGTGACACCCC-----ACATGTCGTATTGGAGGTTG 230103 Query 118365 CCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 118424 || | ||| | || || | |||| ||||| | || || | ||||||||| Sbjct 230102 CCCTTGGAGACAGGACTGCCTTGGTATGTTTCATAAGCACCGTCTTGTTGAGCCAATTCG 230043 Query 118425 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTG 118484 | ||| || | ||||| | || || |||||||| || | || | | ||| Sbjct 230042 CATGACGCTTCCAAAGCTGCATAGTAGATGGTTTCAAAGATCTGTTGGTTGAGTTTTTTG 229983 Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 118544 ||||| ||||| ||||| | | || | || || |||| || | ||||||||| Sbjct 229982 GCCTCCTCGGATTCAAAGGGGTAGCGCATGAGCATGAAGGCATCAGCCAAGCCTTGGACA 229923 Query 118545 CCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTCCGAGCGGTCTCCACGGGATAAAA 118603 ||||| ||||| |||||||| | | || || | | | ||| | |||| || ||| | Sbjct 229922 CCGAGACCAATGGGGCGATGGCGTTTGTTGGATCGTTC-AGCTTCCACCACAGGGTAATA 229864 Query 118604 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 118663 ||| | ||||| | | | || | ||| ||||||| || || |||| || || ||||| Sbjct 229863 ATTGATGTCGATGATCTTGTTCAAATTCTTGGTGATGACTTTGGTGACTTGATACAGCTT 229804 Query 118664 TTCGTAATCAAAACTGCGAGTCTCTTCATTGAC---ATACTTAGGAAGGGCGATTGACGC 118720 | | | ||| || | || || ||||| |||| ||| || ||||| || Sbjct 229803 CTTGAAGTCATAAT----ATTCCCTG--TTGACCACATACGAAGGCAGAGCGATACTGGC 229750 Query 118721 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTT 118780 |||||||| || | | ||||| || ||| || | |||||| || |||| ||| Sbjct 229749 GAGATTACAGACGGCGACTTCATCAGGGCTAGAGTATTCGACAATTTCGGTACACAGGTT 229690 Query 118781 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTA 118840 | || || || |||| ||| | |||||| ||||| |||||| ||||||||||| Sbjct 229689 GCTGCATTTGATAGTTCCCAGGTTTTGTTGATTAGACTTGCGGTTACATGCATCCTTGTA 229630 Query 118841 AAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGC 118900 ||||||| | || |||| || || ||||| | | | ||| || | ||| | | Sbjct 229629 AAGCATGAAGGGGTTCCCAGTTTCAGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTG 229570 Query 118901 AGC--TGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCA 118958 ||| || || ||| || || || || || || ||| | || || || Sbjct 229569 AGCCTTGATCGTTTGACGT--GCGCGGCCTTCCCGTTCATATTTTTCAAAAAGCGCCTCG 229512 Query 118959 AACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT-GGGCAGAAGAGAGACCA 119017 || || |||||| | ||| | || || | ||| || || || || || ||||| Sbjct 229511 AATTCGTCACCCCACACATCTTGTAAACCAGGAG-CTTCGCTAGGACAAAACAGGGACCA 229453 Query 119018 TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAG 119077 || |||| | || || |||||||||||||| || ||||||||||| || ||||||| Sbjct 229452 TTCACCATTGGCTTCCACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCATAGAAGAG 229393 Query 119078 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 119137 ||| ||| || ||| || | || ||| || | ||||||||| | || Sbjct 229392 ATCACGAGCCCGGATTTCGTCTTTGCCGACATTCTTGCGGAGATCCAAAAAGGTGAAGAC 229333 Query 119138 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCT 119193 ||| || ||||| ||||| || |||| |||| | ||| | | | | ||| | | Sbjct 229332 ATCAGCATGCCAAGGTTCAAGATACATGGCGAAAGCACCAGGTCGTTTGTTG-CCACCTT 229274 Query 119194 GGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATT 119253 | | ||||| | |||||| ||| || ||||| ||||| |||| ||||||| ||| | Sbjct 229273 GATCCACATAACGAGCAGTGTTGTTGAAGACACGGAGCATAGGAAGAATACCATTGGAGT 229214 Query 119254 GGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACC 119311 ||| ||||| || || || ||| | | |||| | || | |||||||| | || Sbjct 229213 AGCCGTTTGTACCAGCAATGTAGGAGCC--AGTGGCACGGATGTTGTGGATGTTGAGCCC 229156 Query 119312 AATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATC 119371 || || ||||| |||||||||||||| || || | || | ||||||| || || Sbjct 229155 GATCCCGCCTGCGGTTTTTGAGATTTGCGCACAGACCTTCAGTGTTTCGTAGATGCCTTC 229096 Query 119372 GATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACC 119431 || ||||| |||| | | || | |||||| || | ||||| | || ||||| Sbjct 229095 AATGGAGTCTTCCTTCATGGTGAGCAAGAAGCAAGAGGAGAGCTGAGGACGAGGAGTACC 229036 Query 119432 AGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 || ||||| | ||||| | |||||| |||| Sbjct 229035 GGCATTGAATAAGGTTGGACTGGCGTGGGTGAA 229003 >seq3304 Length=726533 Score = 96.9 bits (106), Expect = 4e-15 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 117832 TTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTG 117891 ||||||| | ||||||||||| |||||||| |||| ||||| ||||| | ||||||| Sbjct 123333 TTGATCGTAAATAGTACATCCCGGTCTTGAGTCCCTTTTTCCAAGCATAGAAGTGCATTG 123392 Query 117892 AGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGA 117951 ||| | |||| | ||| || | ||||||| ||||| ||| ||||| |||| Sbjct 123393 AGGTGAGCTTGCCGTAGGTAGGTTCGCCTGTGAAGAGATTCATGGATTGCGATTGGTCGA 123452 Query 117952 TGAAGCGTCCCCGATCCGCCGCCATATCAATCA-CATCCTTCATCTTGATTTCCCACACA 118010 | ||| | || || || ||||| || || | | || | | ||||||||| || Sbjct 123453 TAAAGGCAGCACGGTCGGCGGCCATGTCGATGATGACCCGTTGT-GAGATTTCCCAGACT 123511 Query 118011 GTCCTGTAGAGGTTCTTAATATCATCTGGGAT 118042 ||| ||||||| ||| | |||||| ||||| Sbjct 123512 GTCTTGTAGAGTGCCTTGAGATCATCAGGGAT 123543 Score = 89.7 bits (98), Expect = 6e-13 Identities = 267/406 (66%), Gaps = 12/406 (3%) Strand=Plus/Plus Query 118335 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 118394 ||| ||| |||||||||| ||| | ||| ||||| ||| || || || | || Sbjct 123898 TCCACCTTCCACATATCATGCTGTAAGATGCCTTGACTGATTGGAGAGCCTTCGTAGGTT 123957 Query 118395 TCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATT 118454 ||||| ||||| | ||| |||||||| | || || ||||| || || || Sbjct 123958 TCATACGGGCCATTCTTCTCGGCCAATTCACACGAAGCTTCCAGGGCGGCAAAGTAGATC 124017 Query 118455 GTTTCAAAAATGCGAGCATTCATTGCCTTGGCCT-CGTC---GGAATCAAACGCGAGTCG 118510 |||||||| ||| | || ||| ||||| | | || ||| || || | |||||| Sbjct 124018 GTTTCAAAGATGT---CCTTG-TTGAGTTGGCGTGCTTCAGGGGATTCGAAGGGGAGTCG 124073 Query 118511 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 118570 | | | ||| |||| ||||||||||| |||||||| || | || ||||| | ||| Sbjct 124074 GAGGAGCAAAAAGGCATCAGCGAGACCTTGAACACCGAGACCTACGGGACGATGACGCAT 124133 Query 118571 ATTAGACTTC--CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 118628 || |||| || || ||||| || || | || |||||| ||| | || || Sbjct 124134 GTT--GCTTCGACGGGCTTGTTCCACAGGGTAGTAGTTGACATCGATCACCTTGTTGAGG 124191 Query 118629 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 118688 || ||| ||| ||||| | | | |||||||| ||||||| || || Sbjct 124192 TTGGTGGCGACGACCTTGACAACTGTGCGGAGCTTTTCAAAATCAAAGGTGTTGGTGGTG 124251 Query 118689 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAG 118734 | ||| ||||| ||||| |||| || ||||| |||||||||| Sbjct 124252 GTGTCGACGTACTTGGGAAGAGCGACAGAGGCCAGGTTACACACAG 124297 >seq319 Length=278629 Score = 93.3 bits (102), Expect = 5e-14 Identities = 147/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 |||||| || ||||| | | ||||||||| || |||||| || ||| ||||| || || Sbjct 176454 GTGGAGGCCTTCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAAACCAGGCATCAGGCC 176513 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 || ||||| | ||| || || | ||| | || ||||||||||| || ||||| Sbjct 176514 ACGTTTCTTGAGCCAAAAGATGGAGGCAAAGGCACCCGAGAAGAAGATACCTTCCACGGC 176573 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 130206 || || || | ||||||||||||||||| | || | | |||| | || Sbjct 176574 AGCAAAGGCGACAAGACGCTCAGCAAAGGATTCG---TTGCCACTGATCCACCGGAAAGC 176630 Query 130207 CCACTGCGCCTTTTTCTCGATACACGGGAC 130236 ||| | |||||||||| |||||| ||||| Sbjct 176631 CCAATCAGCCTTTTTCTTGATACAAGGGAC 176660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618393934911280