Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1090 280 2e-70 seq2275 120 4e-22 seq3304 111 2e-19 seq319 104 3e-17 seq2869 100 3e-16 >seq1090 Length=283134 Score = 280 bits (310), Expect = 2e-70 Identities = 1105/1719 (64%), Gaps = 22/1719 (1%) Strand=Plus/Plus Query 104235 TCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACG 104294 ||||||| |||||| | ||||||||||| ||||| || || || | | || || ||| Sbjct 228923 TCATGCGTGTGGCCGTGGGTATTCATGGCGAAGATATCGACTCGGCTATCGAAACCTACA 228982 Query 104295 ACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACA 104353 | ||||| || ||| |||| ||||| | |||||| | |||||||| ||||| Sbjct 228983 ATCTCATGTCGGAAAAGTAC-TTCACCCACGCCAGTCCAACCTTATTCAATGCCGGTACT 229041 Query 104354 CCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGT 104413 || | || || | ||| ||||||| | || ||| ||||| ||||| || | || Sbjct 229042 CCTCGTCCTCAGCTCTCCTCTTGCTTCTTGCTCACCATGAAGGAAGACTCCATTGAAGGC 229101 Query 104414 ATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATG 104473 ||||| | ||| || | || ||||||||||||||||| || || || || ||| | Sbjct 229102 ATCTACGAAACACTGAAGGTCTGTGCGCAAATCTCAAAAACCGCAGGCGGGATCGGGCTC 229161 Query 104474 CACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGAT 104533 ||||||| | | | |||| | || ||| || ||||| || | || || Sbjct 229162 AACATCCACAACATCCGTGCCACTGGCTCCTACATTGCTGGTACAAACGGCTACTCCAAT 229221 Query 104534 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGG 104593 |||||| |||| ||||| || || || ||| ||| || || ||||| |||||| | || Sbjct 229222 GGTATTCTTCCTATGCTCCGTGTCTTCAACAACACTGCTCGTTATGTGGATCAAGGT-GG 229280 Query 104594 CGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGA 104649 | | || | || || |||| | |||||||| || ||||| || ||| || | Sbjct 229281 CAACAAACGACCTGGTGCTTTCGCCATGTATCTTGAACCTTGGCATGCTGATGTCTTCAC 229340 Query 104650 GTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTC 104709 || | || | || || || | || || ||| || |||||||||| Sbjct 229341 CTTTTTGGATCTCCGCAAGAATGTCGGCAAAGACGAAATCCGGGCTCGTGATCTCTTCTA 229400 Query 104710 CGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCT 104769 ||||||||||| || ||||||||||||||| | || || | | ||| | ||||| || Sbjct 229401 TGCTCTCTGGATCCCTGATCTCTTCATGAAGCGTGTGGAAGCCAATGGTGAATGGTCCCT 229460 Query 104770 CTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCT 104829 |||||||| | | || |||||| | |||| |||||| || || || || || Sbjct 229461 GTTTTGTCCTAGCGAAGCTCCTGGTTTACAAGATGTGTGGGGTGACGAATTCGAGGCGCT 229520 Query 104830 TTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTG 104889 || ||| || || ||||| || || | ||| | ||| | |||| Sbjct 229521 TTTTGAAAAATATGAACGGGAAGGCCGCGCACGTCAAACGATCAAGGCTCAAAAGCTGTG 229580 Query 104890 GAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGC 104949 | | || ||| | | ||||||| || ||||| | || | |||||||||||| || || Sbjct 229581 GTATGCCATTTTGGAAGCTCAAACTGAAACTGGGAACCCCTTCATGCTTTACAAGGATGC 229640 Query 104950 CTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTAC 105009 ||||||| ||| ||||||| | || |||| ||||| | ||| || ||||| Sbjct 229641 ATGTAACCGCAAGTCTAATCAACAAAACCTGGGAACTATCAAATGCAGCAACCTGTGTAC 229700 Query 105010 AGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGC 105069 ||||| | |||| | | ||||| || || ||||| ||||| ||||| Sbjct 229701 CGAAATTGTCGAATACTCTAGCCCTGATGAAGTCGCCGTCTGTAATCTCGCCAGTATCGC 229760 Query 105070 TCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT-TGATTATGAAAAACTCCACGAAG 105128 ||| || |||||||| || | || | | ||| ||| | | || || | ||| Sbjct 229761 TCTGCCTTCGTATGTGG-TCAACAGGGA---ATATTATGACTTCAAGAAGCTGTATCAAG 229816 Query 105129 TTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTG 105188 | || ||| ||||||| || | |||| | || || | |||| |||||| || | Sbjct 229817 TCACCAAAGTCATCACCAAGAATTTGAACAAGATCATCGACATCAATTATTACCCTGTGG 229876 Query 105189 AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCG 105248 | ||| ||| || | | || || || |||||||||||||| || || | | Sbjct 229877 TGGAAGCTGAACGATCCAACAAACGCCATCGCCCCATTGGTCTCGGTGTCCAAGGCTTGG 229936 Query 105249 CGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATG 105308 | |||| ||||| || ||| || | ||||| ||||| || || || || |||| Sbjct 229937 CTGATGCCTTCATGCTCATGCGCTACCCCTTTGAATCCGAGGAGGCCAAAAAACTCAACC 229996 Query 105309 CGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGG 105368 | || ||||| ||||| || | || ||| | || ||| | || ||||| | Sbjct 229997 AACAGATCTTTGAAACCATCTACTATGCAGCTTTGGAAGCGTCATGCGAATTGGCTCAAC 230056 Query 105369 TTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTT 105427 || ||| | |||||||| | | || ||| | || |||||| || |||| Sbjct 230057 AAGACGGTGCTTATGAAACATACCAAGGCAGTCCTGTCTC-CAAGGGCAACCTCCAATAC 230115 Query 105428 GATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGAAGCTCTCAAGGAACGCAT 105486 || ||||||| || | ||| | | || | ||||||| ||| | || | || Sbjct 230116 GACATGTGGG-GTGTCACACCTACCGATCTTTGGGACTGGGCCGCTTTGAAAGCCAAGAT 230174 Query 105487 CAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGC 105546 || | | ||| | || ||| || || | || || ||||| ||||| |||||| | Sbjct 230175 CAGCCAACACGGTGTCCGCAACTCCCTGCTTGTTGCACCTATGCCCACAGCTTCCACCTC 230234 Query 105547 ACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAG 105606 |||||| | || || |||||||| ||||| ||||| | ||| |||| | | Sbjct 230235 GCAAATCCTCGGCTTCAACGAATGCTTCGAACCTTACACCTCCAACCTCTACACCCGTCG 230294 Query 105607 AACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGAT 105666 |||||| || || || || |||||| ||| | | ||| | || | Sbjct 230295 TGTCCTCGCTGGTGAATTCCAAATCGTCAACCCTTGGCTCCTCAAAGACTTGGTCGAACT 230354 Query 105667 TGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAA 105726 || ||||| | | || || ||| | | ||| || | |||| || | || || Sbjct 230355 CGGCATCTGGAACGAAGACATCAAGAACCGCATCATGTCTGACAGTGGCTCGGTACAGAA 230414 Query 105727 TATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGAT 105786 || | | || || || | | || ||||| || || ||||||||| | Sbjct 230415 CATCCAGAACATCCCGGATCATCTCAAAGCAATGTACAAGACGGTATGGGAAATCTCG-C 230473 Query 105787 GAAGGA-TGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTA 105845 | | | ||||||| |||||||| ||||| || ||| || || ||||||||||| Sbjct 230474 AACGCACACTCATTGATATGGCCGCTGATCGGGGGGCCTTTATCGACCAAAGTCAAAGCT 230533 Query 105846 TGAATCTCTTCATGGAAAGTCC--AACGATGTCCAAGCTCTCTTCTATGCACATGTACAG 105903 ||||| ||||||| | |||| ||| || |||||| | ||||||| | || | Sbjct 230534 TGAATATCTTCATCG-GTGTCCCTAACTTTG-GCAAGCTGACCAGTATGCACTTTTATGG 230591 Query 105904 TTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 105942 ||||| ||||| ||||| || || |||||||||||||| Sbjct 230592 ATGGAAAAAGGGGCTCAAGACCGGCATGTATTACCTCCG 230630 >seq2275 Length=1761326 Score = 120 bits (132), Expect = 4e-22 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 |||||||| || ||||| |||| ||||| |||||| |||||||||||||||||| | Sbjct 1159778 TCCTTTGCCGAACGACTTGTCGCCTTTGCTGCTGTTGAAGGTATCTTCTTCTCTGGTGCA 1159719 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 ||| | |||| | ||||||||||||||| ||| | ||||| || | |||||||||| Sbjct 1159718 TTCGCCTCTATCTTTTGGCTCAAGAAGCGTGGTTTGATGCCTGGCTTGACCTTCTCCAAC 1159659 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 || || ||| || ||||| || || ||| || ||||| Sbjct 1159658 GAACTGATCAGCCGAGACGAAGGCCTTCACACCGACTTTGC 1159618 >seq3304 Length=726533 Score = 111 bits (122), Expect = 2e-19 Identities = 273/411 (66%), Gaps = 5/411 (1%) Strand=Plus/Minus Query 105035 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 105094 ||||| ||||||||||||||| || || ||||||| |||||||| || || | Sbjct 124307 GATGAAGTGGCTGTGTGTAACCTGGCCTCTGTCGCTCTTCCCAAGTACGTCGACACCACC 124248 Query 105095 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTA 105154 || || || ||||||| |||||| |||| | |||| || ||| ||| ||||| Sbjct 124247 ACCAACACCTTTGATTTTGAAAAGCTCCGCACAGTTGTCAAGGTCGTCGCCACCAACCTC 124188 Query 105155 AACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGA 105214 |||| || || ||| || | ||||| || || || ||| | || ||| | Sbjct 124187 AACAAGGTGATCGATGTCAACTACTACCCTGTGGAACAAGCCCGTCGAAGCAACATGCGT 124128 Query 105215 CACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 105274 || ||||| | |||||||||||||| |||||||| |||| || | || || | | Sbjct 124127 CATCGTCCCGTAGGTCTCGGTGTTCAAGGTCTCGCTGATGCCTTTTTGCTCCTCCGACTC 124068 Query 105275 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCAC 105334 | || || ||| ||||| || |||| | ||| ||||| || || || Sbjct 124067 CCCTTCGAATCCCCTGAAGCACGCCAACTCAACAAGGACATCTTTGAAACGATCTACTTT 124008 Query 105335 GCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394 ||||| || || || | || ||||| ||| |||| || |||||||||| || Sbjct 124007 GCCGCCCTGGAAGCTTCGTGTGAATTGGCCGAGAAGAATGGCCCGTATGAAACCTACGAA 123948 Query 105395 GGTTCTCCAGCTTCA--CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTG 105443 || |||||| ||| ||||| | | || |||||||| |||||||| Sbjct 123947 GGCTCTCCA--ATCAGTCAAGGCATCTTACAGCATGATATGT-GGAAGGTG 123900 Score = 91.5 bits (100), Expect = 2e-13 Identities = 191/279 (68%), Gaps = 7/279 (3%) Strand=Plus/Minus Query 104125 CATTGACACGAAGAGAGACTACGACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAG 104184 ||||||| | ||||| || |||||| | |||||| |||| || | || || Sbjct 125406 CATTGACTACACCAGAGATTATGACTTTAACTTTTTTGGCTTCAAGACGTTGGAACGCAG 125347 Query 104185 CTATCT-TCAACGGCTCGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGCG 104243 |||||| |||| || | ||| | | | ||||| || || | ||| ||||||| | Sbjct 125346 CTATCTGTCAAAGG-TGGATAATCGCATTGTGGAACGACCTCAACATATGATCATGCGTG 125288 Query 104244 TGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGT 104303 |||| | || || ||||| | || |||||| ||| | | | || |||||| |||| Sbjct 125287 TGGCTTTGGGGATCCATGGCAAGGATATTGATGCTGCCATCCAAACCTACGACCTTATGT 125228 Query 104304 CCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCC 104362 ||| | ||| |||| || || || || || |||||||||||||||||||| | || Sbjct 125227 CCCTCAAGTAC-TTCACCCATGCTACCCCCACTCTCTTCAATGCTGGTACACCTCGCCCT 125169 Query 104363 CAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 ||| | ||||| || | | ||| ||||| | ||||| Sbjct 125168 CAACTATCCAGCTGTT---ATCTCGTCAACATGCAGGAC 125133 >seq319 Length=278629 Score = 104 bits (114), Expect = 3e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 |||||||||||||| || |||| ||||| || || |||||||||||||| ||| || Sbjct 176603 TCCTTTGCTGAGCGTCTTGTCGCCTTTGCTGCCGTGGAAGGTATCTTCTTCTCGGGTGCC 176544 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 || | | || | |||||||||||| || || || ||||| ||| | |||||||||| Sbjct 176543 TTTGCCTCCATCTTTTGGCTCAAGAAACGTGGCCTGATGCCTGGTTTGACCTTCTCCAAC 176484 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 || || ||| | ||||| || |||||| Sbjct 176483 GAACTCATCAGCAGAGACGAAGGCCTCCAC 176454 >seq2869 Length=18354 Score = 100 bits (110), Expect = 3e-16 Identities = 260/394 (66%), Gaps = 2/394 (1%) Strand=Plus/Minus Query 7238 TACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAACGAGGAG 7297 |||||||| || || || || ||| || ||||| || || || ||||| || Sbjct 10278 TACCAAGCGTCGACCTCTGAACTGTACGGCAAAGTAGTGGAGACCCCCCAAAAGGAAACC 10219 Query 7298 ACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCGTC 7357 || ||||||||||| ||||| || || || | ||| | | | ||| ||||| Sbjct 10218 ACCCCCTTCTACCCCCGCTCTCCATATGGTGTGGCCAAGCTCTATGGTTACTGGATCGTC 10159 Query 7358 AAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATGAA 7417 || || || || |||||| ||| ||| || ||| |||||||||||||||||| Sbjct 10158 GTGAACTATCGTGAATCTTACAACATGTATGCCTGTAACGGTATCCTCTTCAACCATGAA 10099 Query 7418 TCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTACCGAGGGTATCAAACAAATC 7477 || || | || || ||||||||| ||||| | | | | | ||| Sbjct 10098 TCCCCTCGTCGTGGCCGTACCTTTGTCACCCGCAAGATCTCTCGTGCTGTGGCGGATATC 10039 Query 7478 -ATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGAGATTGGGG 7536 || || | ||| ||| | || | | || ||||| | || | | |||||||| Sbjct 10038 CATCTCGGTCGTCAAG-AGTGCCTTTATCTCGGCAACATCGATGCCAAGCGTGATTGGGG 9980 Query 7537 TCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCGACGA 7596 ||| || ||||||||| |||| ||||||||| ||| | |||||||| || | ||||| Sbjct 9979 TCATGCTCGGGACTATGTGGAAGGTATGTGGCTGATGTTGCAACAAGATCAACCTGACGA 9920 Query 7597 ATATGTAGTAGCAACGGGTGAGACCCATACAGTG 7630 | ||| | || || ||||| |||||||| ||| Sbjct 9919 CTTTGTCTTGGCTACCGGTGAAACCCATACTGTG 9886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583221881923120