Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3256 179 9e-40 seq236 178 3e-39 seq3208 167 5e-36 seq1528 154 3e-32 seq304 138 3e-27 seq2275 136 9e-27 seq197 118 2e-21 >seq3256 Length=796958 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||||||||| || || ||||||||||| || || | || || | |||||| Sbjct 724069 AGAACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCT 724010 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| || ||||| |||||||| | |||||||||||| || || | |||||||||||| Sbjct 724009 TCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATTCCTTCCTTGTCT 723950 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||||| |||||||| ||||| | ||||||| ||| || || || ||||| || Sbjct 723949 TGGATCTTTTGCTTCACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTT 723890 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 723889 TTACCAGTCAGGGTCTTGACGAAGATTTGCAT 723858 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || |||||||| || || ||||| ||||| || || | ||| || | |||||| Sbjct 723385 AGGACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCT 723326 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||||| |||||||| || ||||| ||||| || || | ||||||||| || Sbjct 723325 TCCAATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTTATCT 723266 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||||| || ||||| ||||||| ||| || |||||| ||||||||||| ||| Sbjct 723265 TGAATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACTTCGAGAGTGATGGTC 723206 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || | ||||| || || | ||||| || Sbjct 723205 TTGCCAGTCAAGGTCTTGACGAAGATTTGCATGTT 723171 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||||||||| || || ||||||||||| || || | || || | |||||| Sbjct 723841 AGAACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCT 723782 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| || || || |||||||| | ||||| || ||||| || | ||||||||||| Sbjct 723781 TCCAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGGGGGATACCTTCCTTGTCT 723722 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||||| ||||| || ||||| | ||||||| ||| || || |||||||| ||| Sbjct 723721 TGGATCTTTTGCTTCACATTGTCGATAGAGTCAGAGGATTCCACTTCCAGAGTGATTGTC 723662 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | |||||| ||||| | ||||| Sbjct 723661 TTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 723630 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||||||||| || |||||||||||||| || || | || || | |||||| Sbjct 724297 AGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCCATCT 724238 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| || || || |||||||| | ||||||||||| || || | ||||||||||| Sbjct 724237 TCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTTGTCT 724178 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||||| ||||| || ||||| | ||| ||| ||| || || |||||||| ||| Sbjct 724177 TGGATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGATTGTC 724118 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| ||||| | ||||| Sbjct 724117 TTACCAGTCAAGGTCTTCACAAAGATTTGCAT 724086 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| || | |||||| || || ||||| || |||||||||||||| || || | | || Sbjct 724535 ACGGAGACGTAGGACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAAAGT 724476 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| |||||||| || || ||||| | ||||| ||||| || || | || Sbjct 724475 ACGACCATCTTCGAGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGGGATACC 724416 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| ||||||||||| || ||||| ||||| | ||||||| ||| || || | Sbjct 724415 TTCCTTGTCTTGGATCTTTTGCTTGACGTTATCGATAGAGTCAGAGGATTCCACTTCCAA 724356 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || ||||| || || || ||||| ||||| | ||||| Sbjct 724355 AGTAATAGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 724314 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 |||||||| || || ||||||||||| || || | || || | ||||||||||| || Sbjct 723604 TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTCCAGTTGT 723545 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| |||||||| | |||||||||||| || || | ||||||||||| ||||||||| Sbjct 723544 TTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTGGATCTTT 723485 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || || ||||| ||||| | ||| ||| ||| || || | || || ||||| || || Sbjct 723484 TGCTTGACGTTATCGATAGAGTCGGAGGATTCCACTTCCAAGGTAATGGTCTTGCCAGTC 723425 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| | ||||| Sbjct 723424 AAGGTCTTGACAAAGATTTGCAT 723402 >seq236 Length=318481 Score = 178 bits (196), Expect = 3e-39 Identities = 161/203 (79%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||||||||| || ||||| ||||| ||||| | ||||| | ||||||||||| || Sbjct 112589 TGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGTTGT 112648 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || ||||| || ||||||||||| ||||||| ||||||||||| || |||||| Sbjct 112649 TTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTT 112708 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || || || || ||||||| ||||||| ||| || || || ||||| ||||| || || Sbjct 112709 TGCTTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTGCCTGTA 112768 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | ||||| Sbjct 112769 AGCGTCTTGACGAAGATTTGCAT 112791 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || ||||| |||||||||||||| || || | || || | |||||| Sbjct 111768 AGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCT 111827 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| || || || || |||||||| |||||||| |||||||| | ||||| || || Sbjct 111828 TCCAGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCT 111887 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||||| || ||||| ||||| | ||||||| ||| || || || ||||| ||| Sbjct 111888 TGAATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTC 111947 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | ||||| Sbjct 111948 TTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 111979 Score = 158 bits (174), Expect = 3e-33 Identities = 144/182 (79%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || ||||| |||||||||||||| || |||| || || | |||||| Sbjct 111996 AGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCT 112055 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| || || || || |||||||| |||||||| |||||||| | ||||| || || Sbjct 112056 TCCAGTTGTTTACCAGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCT 112115 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||||| || ||||| ||||| | ||||||| ||| || || || ||||| ||| Sbjct 112116 TGGATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATGGTC 112175 Query 211083 TT 211084 || Sbjct 112176 TT 112177 >seq3208 Length=262556 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || || |||||||| || || ||||| ||||| || || | || || Sbjct 84070 ACGAAGACGAAGCACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGTGT 84129 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| ||||| || || || ||||||||||| |||||||| || || | || Sbjct 84130 GCGGCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGGATGCC 84189 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| || |||||||||||||| ||||| ||||||| |||||| ||| || || | Sbjct 84190 TTCCTTATCTTGGATCTTTTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCACTTCCAA 84249 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || ||||| |||||||| | ||||| Sbjct 84250 TGTAATGGTCTTGCCAGTAAGAGTTTTTACAAAGATTTGCAT 84291 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || || || ||||||||||| ||||| | || || | |||||| Sbjct 83852 AGCACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAGAGAGTGCGACCATCT 83911 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || |||||||| ||||| || ||||| ||||||||||| | ||||| || || Sbjct 83912 TCTAGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCT 83971 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||||| || ||||| ||||| | ||| ||| ||| || || |||||||| ||| Sbjct 83972 TGAATCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTGATAGTC 84031 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | |||||| || || | |||||| Sbjct 84032 TTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 84063 >seq1528 Length=6275 Score = 154 bits (170), Expect = 3e-32 Identities = 129/158 (82%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||||||||| || ||||||||||| || || | | || | |||||| Sbjct 4519 AGGACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTGCGACCATCT 4460 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| ||||||||||| ||||| || |||||||||| ||||||||||| Sbjct 4459 TCGAGTTGCTTGCCAGCGAAGATAAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCT 4400 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT 211060 ||||||||||| || || || ||||||| ||| ||||| Sbjct 4399 TGGATCTTTTGCTTGACATTGTCGATGGAGTCGGAGCT 4362 >seq304 Length=62727 Score = 138 bits (152), Expect = 3e-27 Identities = 126/159 (79%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || |||||||| || ||||||||||| || || | | || | |||||| Sbjct 38838 AGGACCAAATGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAACGTACGGCCATCT 38897 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| || |||||||| ||||| || |||||||||| ||||||||||| Sbjct 38898 TCGAGTTGCTTGCCGGCAAAGATAAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCT 38957 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT 211061 || |||||||| || || || ||||| | |||||||||| Sbjct 38958 TGAATCTTTTGCTTGACATTGTCGATCGAGTCAGAGCTT 38996 >seq2275 Length=1761326 Score = 136 bits (150), Expect = 9e-27 Identities = 125/158 (79%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||||||||| || ||||| ||||| || || | | || | || ||| Sbjct 759220 AGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCGTCT 759279 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| || |||||||| ||||| || |||||||| | ||||||||||| Sbjct 759280 TCGAGTTGCTTGCCAGCAAAGATAAGACGTTGCTGATCAGGAGGGATACCTTCCTTGTCT 759339 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT 211060 ||||||||||| || ||||| ||||| | ||| ||||| Sbjct 759340 TGGATCTTTTGCTTGACGTTGTCGATAGAGTCGGAGCT 759377 >seq197 Length=169696 Score = 118 bits (130), Expect = 2e-21 Identities = 144/195 (74%), Gaps = 1/195 (1%) Strand=Plus/Minus Query 210866 TTCAAGAAGGGGTTAGCTAATATTTCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTC 210925 |||||| | || || | ||||| | ||| || | ||||| | ||||| ||||| || Sbjct 118683 TTCAAGGAAGG-TTCGATAATACCACCACGGAGACGAAGGACCAAATGAAGGGTGGATTC 118625 Query 210926 TTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985 ||||||||||| || || | || || | |||||||||| ||||| || || ||||| Sbjct 118624 CTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCCAATTGCTTTCCAGCAAAGAT 118565 Query 210986 AAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTC 211045 | ||||| || ||||| || | |||||||| || ||||||||||| || || || || Sbjct 118564 CAAACGTTGCTGATCAGGGGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTC 118505 Query 211046 GATGGTGTCAGAGCT 211060 ||| | ||| ||||| Sbjct 118504 GATCGAGTCGGAGCT 118490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159072721972370