Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2275 129 5e-25 seq319 125 6e-24 >seq2275 Length=1761326 Score = 129 bits (142), Expect = 5e-25 Identities = 298/446 (67%), Gaps = 10/446 (2%) Strand=Plus/Plus Query 4259 TTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTC 4318 ||| || ||||| || || ||||| || || || |||||||||| | || || || Sbjct 1159326 TTGATAATCGGAGACACGTTTTTCAAAAAAGTTGGTTTTGCCTTGGAGAGAGATCAGATC 1159385 Query 4319 CATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTC---ACACTTTAGAGCTACAAG 4375 |||||| || || || || || | ||||| || || || || | ||||| || || Sbjct 1159386 CATAAAGTCGAAGGGGTTGGTGGATTTGTAGTGCTTCTCTTGACCC---AGAGCGACCAG 1159442 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 | || || || || ||||| || || |||| ||| || | | |||| || || || | Sbjct 1159443 AAGGCGATCGGCGACGAATTCGATGTATTGGCACATAAGCTTGGAGTTCATACCGATAAG 1159502 Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 ||||| || |||| ||||| || || ||||| || | |||||||| || || Sbjct 1159503 GGCGACAGGAAGAGCGTCGGTCAAGAATTCCTGTTCGATGGCGACGGCTTCGACAATGAT 1159562 Query 4496 ATCTTTTATTTTATCTTTAGATGGTT--TATTTACTAAGTATCCAAACAATAAACACGCA 4553 || | | | | |||| || | | | | || | || || ||| Sbjct 1159563 TTCAAGGACTCGGGCGTGGCTAGGTTGGTAGTGGAGATGGTTG--AATAGCAAGCAGGCA 1159620 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 || || || | |||||||||| ||| ||||||||||| || || || || || ||| Sbjct 1159621 AAGTCGGTGTGAAGGCCTTCGTCTCGGCTGATCAGTTCGTTGGAGAAGGTCAAGCCAGGC 1159680 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || ||||| | ||| || |||||||| |||| ||| |||| ||||| ||||| || ||| Sbjct 1159681 ATCAAACCACGCTTCTTGAGCCAAAAGATAGAGGCGAATGCACCAGAGAAGAAGATACCT 1159740 Query 4674 TCTACGGCGGCAAACGCTACTAATCG 4699 || || || ||||| || || | ||| Sbjct 1159741 TCAACAGCAGCAAAGGCGACAAGTCG 1159766 >seq319 Length=278629 Score = 125 bits (138), Expect = 6e-24 Identities = 291/436 (67%), Gaps = 2/436 (0%) Strand=Plus/Plus Query 4259 TTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTC 4318 ||| || ||||| || || ||||||||||| || || ||||||| | || || || Sbjct 176151 TTGATAATCGGAGACACGTTTTTCGAAGAAGTTTGTCTTGCCTTGAAGGGAGATCAGGTC 176210 Query 4319 CATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAA 4378 |||||| ||||| ||||| | | |||||| || || || ||||| || | | Sbjct 176211 CATAAAGTCAAAGGGATTGGAAGAGTTGTAGTGCTTGTCTTGACCGAGAGCCACCAAGAG 176270 Query 4379 TCGGTCAGCTACAAATTCTATATACTGGCTCATGA-GTTCGCAGTTAATTCCAATTAATC 4437 || || || || ||||| || || || | ||| | | | | |||| || ||||| | Sbjct 176271 ACGATCGGCGACGAATTCGATGTATTGACACATTAAGGTTG-AGTTCATGCCAATGAGAG 176329 Query 4438 TCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATAT 4497 |||||| || |||| ||||| || ||||| || || | || ||||| || || | Sbjct 176330 CCACAGGGAGAGCGTCCGTCAAGAATTCTTGCTCGATCGCCACCGCTTCGACAATGATTT 176389 Query 4498 CTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAAT 4557 | | || |||| || | | ||||||| ||| || || |||| Sbjct 176390 CCCGCACCCGGTCACGGCTAGGTTGGTTGTGGAGATGGCCAAACAGTAAGCAGGCGAAAT 176449 Query 4558 CACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTA 4617 | || | |||||||||||||| || |||||||| || || || || || ||||| | Sbjct 176450 CGGTGTGGAGGCCTTCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAAACCAGGCATCA 176509 Query 4618 AACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTA 4677 || | || || |||||||| || | |||||| | || || ||||| || ||||| | Sbjct 176510 GGCCACGTTTCTTGAGCCAAAAGATGGAGGCAAAGGCACCCGAGAAGAAGATACCTTCCA 176569 Query 4678 CGGCGGCAAACGCTAC 4693 |||| ||||| || || Sbjct 176570 CGGCAGCAAAGGCGAC 176585 Score = 105 bits (116), Expect = 6e-18 Identities = 154/214 (72%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 4793 TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGA 4852 ||| |||||| || | || ||||| |||||||||| || | | |||||| |||||| Sbjct 176800 TTTTCTTTTTCCACAGGGTCCTTGA-TATAAGTGTCGATCAACAAGCTATAGGTTTCAGC 176858 Query 4853 ATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA-CTTGAA 4911 ||| || ||||| || || || ||||| || |||||| | ||||| | | |||| | Sbjct 176859 ATGGATGTTTTCAATCATGATTTGGAATCCATAGAAGCATTTGGCTTCAGCGATCTTG-A 176917 Query 4912 CTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAA 4971 |||| | ||| ||| || |||||||| || || ||||| || | |||||| | Sbjct 176918 CTTCATCCATAAAGTTTTGCACCAAGTTTTCATTGACGATACCATCCGAGCTTGCAAAGA 176977 Query 4972 ACGCCAAAACATGAGATATAAAGTACTGTTCGTC 5005 | ||||| | |||||| |||||||| |||| || Sbjct 176978 AGGCCAAGATATGAGAGATAAAGTAGCGTTCATC 177011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427021817487554