Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq3256 149 1e-30 seq3208 140 7e-28 seq236 129 1e-24 seq1528 104 5e-17 seq304 104 5e-17 >seq3256 Length=796958 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| |||||||||||||| || ||||| |||||||| || | | ||| | Sbjct 723392 GAGACGGAGGACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCG 723333 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| | || ||||||||||| || | |||||||| | | ||||||||| Sbjct 723332 GCCATCTTCCAATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGGATTCCTTC 723273 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| ||||| ||||| | || | | ||| ||| || ||||| ||||| Sbjct 723272 CTTATCTTGAATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACTTCGAGAGT 723213 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || ||||| || | ||||| ||||||| ||||| || Sbjct 723212 GATGGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCATGTT 723171 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| |||||||| ||||||||||||||||| || | ||||| | |||||| Sbjct 724525 AGGACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAAAGTACGACCATCT 724466 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || |||||||| ||||| | | |||||||| | | ||| |||||||| ||| Sbjct 724465 TCGAGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGGGATACCTTCCTTGTCT 724406 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||||| ||||| | || | ||| || || ||||| | ||||||||| Sbjct 724405 TGGATCTTTTGCTTGACGTTATCGATAGAGTCAGAGGATTCCACTTCCAAAGTAATAGTC 724346 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| || |||| ||||| Sbjct 724345 TTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 724314 Score = 123 bits (136), Expect = 6e-23 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || ||||||||||| || |||||||||||||| || | | || | Sbjct 724076 GAGACGGAGAACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCG 724017 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 |||||||| || ||| || |||||||| |||| | || ||||| | | |||||||| Sbjct 724016 ACCATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGT-TGTTGGTCTGGGGGGATTCCTT 723958 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| ||||| || ||||| || || | || | ||| || || |||||||| | Sbjct 723957 CCTTGTCTTGGATCTTTTGCTTCACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGG 723898 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || ||||| || || || ||||| ||||||| ||||| Sbjct 723897 TGATTGTTTTACCAGTCAGGGTCTTGACGAAGATTTGCAT 723858 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||||||||| || |||||||||||||| || | | ||| | Sbjct 723848 GAGACGGAGAACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCG 723789 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || ||| || |||||||| | | ||||| || | | ||| ||||| Sbjct 723788 GCCATCTTCCAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGGGGGATACCTTC 723729 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || ||||| || ||| | || | ||| || || ||||| ||||| Sbjct 723728 CTTGTCTTGGATCTTTTGCTTCACATTGTCGATAGAGTCAGAGGATTCCACTTCCAGAGT 723669 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || | |||||| || |||| ||||| Sbjct 723668 GATTGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 723630 Score = 111 bits (122), Expect = 4e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | |||||||||||| || |||||||||||||| || | | || | Sbjct 723620 GAGACGGAGAACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCG 723561 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 |||||||| || ||| || |||||||| |||| | || ||||| | | ||| |||| Sbjct 723560 ACCATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGT-TGTTGGTCTGGGGGGATACCTT 723502 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| ||||| || ||||| ||||| | || | ||| || || ||||| | | Sbjct 723501 CCTTGTCTTGGATCTTTTGCTTGACGTTATCGATAGAGTCGGAGGATTCCACTTCCAAGG 723442 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || ||||| || | ||||| || |||| ||||| Sbjct 723441 TAATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 723402 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||||||||| ||||||||||||||||| || | | || | Sbjct 724304 GAGACGGAGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACG 724245 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| | ||| || |||||||| | | || ||||| | | ||| ||||| Sbjct 724244 GCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTC 724185 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || ||||| || ||| | || | ||| || || ||||| ||||| Sbjct 724184 CTTGTCTTGGATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGT 724125 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | |||||||| |||| ||||| Sbjct 724124 GATTGTCTTACCAGTCAAGGTCTTCACAAAGATTTGCAT 724086 >seq3208 Length=262556 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||||||||| || || ||||| |||||||| |||| | || | |||||| Sbjct 84080 AGCACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCT 84139 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||||||||| |||||||| | ||| ||||| | | ||| |||||||| ||| Sbjct 84140 TCAAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTATCT 84199 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||||||||||| | || | | ||| ||| || ||||| | ||||| || Sbjct 84200 TGGATCTTTTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCACTTCCAATGTAATGGTC 84259 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || ||||| || || |||| ||||| Sbjct 84260 TTGCCAGTAAGAGTTTTTACAAAGATTTGCAT 84291 Score = 138 bits (152), Expect = 3e-27 Identities = 156/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || || ||||||||||||||||| | | ||| | |||||||||| Sbjct 83857 CAAG-TGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCTA 83915 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || || ||||| |||| |||||||| | | ||| ||||| || ||||||| Sbjct 83916 GTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCTTGAA 83975 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||||| ||||| | || | |||||| || ||||| ||||| ||||| |||| Sbjct 83976 TCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTGATAGTCTTGC 84035 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| ||||||| |||||| Sbjct 84036 CAGTCAAAGTCTTGACGAAGATCTGCAT 84063 >seq236 Length=318481 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||||||| || || ||||| ||||||||||| | | || | Sbjct 112573 GAGACGGAGAACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCG 112632 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || ||| ||||| ||||| || | || ||||| | | || ||||| Sbjct 112633 GCCATCTTCCAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTC 112692 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| ||||| |||||| | || | | ||| || || |||||||| || Sbjct 112693 CTTGTCTTGAATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGT 112752 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| ||||||| ||||| Sbjct 112753 GATTGTCTTGCCTGTAAGCGTCTTGACGAAGATTTGCAT 112791 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || || || ||||||||||||||||| || | | || | Sbjct 111761 GAGACGGAGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTGCG 111820 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || ||| ||||| |||||||| | || || || | | ||| ||||| Sbjct 111821 GCCATCTTCCAGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTC 111880 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || |||||||| ||||| ||||| | || | ||| || || |||||||| || Sbjct 111881 TTTATCTTGAATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGT 111940 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| || |||| ||||| Sbjct 111941 GATTGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 111979 >seq1528 Length=6275 Score = 104 bits (114), Expect = 5e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | |||||||| || || |||||||||||||| |||| ||||| | Sbjct 4526 GAGACGGAGGACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTGCG 4467 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || || ||||||||||| | ||||| || | | || ||||| Sbjct 4466 ACCATCTTCGAGTTGCTTGCCAGCGAAGATAAGACGTTGCTGATCAGGAGGAATACCTTC 4407 Query 152006 CTTTTCTTGAATTTTTTGTTTGACA 152030 ||| ||||| || ||||| |||||| Sbjct 4406 CTTGTCTTGGATCTTTTGCTTGACA 4382 >seq304 Length=62727 Score = 104 bits (114), Expect = 5e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | ||| ||||| || || |||||||||||||| |||| || || | Sbjct 38831 GAGACGGAGGACCAAATGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAACGTACG 38890 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || ||||| |||||||| | ||||| || | | || ||||| Sbjct 38891 GCCATCTTCGAGTTGCTTGCCGGCAAAGATAAGACGTTGCTGATCAGGAGGAATACCTTC 38950 Query 152006 CTTTTCTTGAATTTTTTGTTTGACA 152030 ||| |||||||| ||||| |||||| Sbjct 38951 CTTGTCTTGAATCTTTTGCTTGACA 38975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153741886589798