Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq236 140 2e-28 seq3256 134 1e-26 seq3208 125 5e-24 seq197 93.3 3e-14 seq1528 86.0 5e-12 >seq236 Length=318481 Score = 140 bits (154), Expect = 2e-28 Identities = 161/215 (75%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| ||| |||||||| ||||||||||| | ||| ||| | || ||| Sbjct 112583 ACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCC 112642 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || ||||||||||| | ||| || || |||| ||| | ||||||||| || Sbjct 112643 AGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 112702 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||||| || ||| | |||| ||| | ||||||||| || | || || |||| Sbjct 112703 ATCTTTTGCTTGACATTGT--CGATGGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCT 112760 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 | || || || ||||| ||||||||||||||| || Sbjct 112761 TGCCTGTAAGCGTCTTGACGAAGATTTGCATGGTG 112795 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| || |||||||||||||| || | ||| ||| | || ||| Sbjct 111771 ACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCC 111830 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || ||||||||||| | ||| || ||||| | ||| | ||||| || || Sbjct 111831 AGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCTTGA 111890 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | | || | ||| | ||||||||| || | || || ||||| Sbjct 111891 ATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTG 111950 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| || ||||||||||| Sbjct 111951 CCAGTCAGGGTCTTGACAAAGATTTGCAT 111979 >seq3256 Length=796958 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| || || || || |||||||||||||| || | | || | || || Sbjct 724522 ACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAAAGTACGACCATCTTCG 724463 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||||||||||||||||||||| ||||| |||| || | ||||||||| || Sbjct 724462 AGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGG 724403 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | | || | ||| | ||||||||| |||| ||||| ||||| Sbjct 724402 ATCTTTTGCTTGACGTTATCGATAGAGTCAGAGGATTCCACTTCCAAAGTAATAGTCTTG 724343 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| || ||||||||||| Sbjct 724342 CCAGTCAGGGTCTTGACAAAGATTTGCAT 724314 Score = 129 bits (142), Expect = 4e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || ||||||||||||||||| || | ||| ||| | || ||| Sbjct 723838 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCC 723779 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || || || ||||||||||| |||||||| | || | ||||||||| || Sbjct 723778 AGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGGGGGATACCTTCCTTGTCTTGG 723719 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||||| | | || | ||| | ||||||||| |||| || || ||||| Sbjct 723718 ATCTTTTGCTTCACATTGTCGATAGAGTCAGAGGATTCCACTTCCAGAGTGATTGTCTTG 723659 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| || ||||||||||| Sbjct 723658 CCAGTCAAAGTCTTGACAAAGATTTGCAT 723630 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| || ||||||||||||||||| || | ||| ||| | || ||| Sbjct 723610 ACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTCC 723551 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || || || |||||||| || || || |||| || | ||||||||| || Sbjct 723550 AGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTGG 723491 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | | || | ||||| ||||||||| |||| ||||| ||||| Sbjct 723490 ATCTTTTGCTTGACGTTATCGATAGAGTCGGAGGATTCCACTTCCAAGGTAATGGTCTTG 723431 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||| || ||||||||||| Sbjct 723430 CCAGTCAAGGTCTTGACAAAGATTTGCAT 723402 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||||||||| || ||||||||||||||||| || | ||| ||| | || ||| Sbjct 724066 ACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTCC 724007 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || || || |||||||| || || || |||| || | |||||||| || Sbjct 724006 AGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTGG 723947 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||||| | | || | ||| | ||||||||| || | || || || || Sbjct 723946 ATCTTTTGCTTCACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTTTTA 723887 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| |||||||||||||| Sbjct 723886 CCAGTCAGGGTCTTGACGAAGATTTGCAT 723858 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || || |||||||||||||| || | ||| || | || ||| Sbjct 724294 ACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCCATCTTCC 724235 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | || || || || ||||||||||| || || |||| || | ||||||||| || Sbjct 724234 AATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTGG 724175 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||||| | | || | ||| | ||||||||| |||| || || ||||| Sbjct 724174 ATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGATTGTCTTA 724115 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||||||| ||||||||||| Sbjct 724114 CCAGTCAAGGTCTTCACAAAGATTTGCAT 724086 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| ||||| || |||||||| |||||||| || | || ||| | || ||| Sbjct 723382 ACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 723323 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||||| ||||| ||||| | || ||||| |||| || | |||||||| || Sbjct 723322 AATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTTATCTTGA 723263 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | | |||| ||||| ||||| || || | || || ||||| Sbjct 723262 ATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTG 723203 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || | |||||| ||||||||||||||| || Sbjct 723202 CCAGTCAAGGTCTTGACGAAGATTTGCATGTTG 723170 >seq3208 Length=262556 Score = 125 bits (138), Expect = 5e-24 Identities = 161/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||| ||||| || |||||||| |||||||| |||| |||| ||| | || || Sbjct 84082 CACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTC 84141 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||| |||||||||||||| | ||||| || || | || | |||||||| || Sbjct 84142 AAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTATCTTG 84201 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| || || | | | |||| ||| | |||||||| |||| ||||| ||||| Sbjct 84202 GATCTTTTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCACTTCCAATGTAATGGTCTT 84261 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGAT--GTGAAT 44346 || || || || || || ||||||||||| || |||||| Sbjct 84262 GCCAGTAAGAGTTTTTACAAAGATTTGCATAATGGGTGAAT 84302 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || || |||||||||||||||||||| | ||| ||| | || || Sbjct 83854 CACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTC 83913 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || || || || |||||||| | || ||||| || | ||| | ||||| || || Sbjct 83914 TAGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCTTG 83973 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | | || | ||| | ||||||||| |||| || || ||||| Sbjct 83974 AATCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTGATAGTCTT 84033 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| |||||||| ||||| Sbjct 84034 GCCAGTCAAAGTCTTGACGAAGATCTGCAT 84063 >seq197 Length=169696 Score = 93.3 bits (102), Expect = 3e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| ||| ||||||||||||||||| || | ||| ||| | || ||| Sbjct 118644 ACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCC 118585 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||||| || |||||||||||||| |||||||| | || | ||||||||| || Sbjct 118584 AATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCAGGGGGGATACCTTCCTTATCTTGG 118525 Query 44249 ATCTTCTGCTT 44259 ||||| ||||| Sbjct 118524 ATCTTTTGCTT 118514 >seq1528 Length=6275 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/153 (73%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| ||||||||||||||||| |||| | ||| | || || Sbjct 4516 ACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTGCGACCATCTTCG 4457 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || || ||||| | ||| |||||||| | ||| | ||||||||| || Sbjct 4456 AGTTGCTTGCCAGCGAAGATAAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGG 4397 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279 ||||| ||||| || ||| | |||| ||||| Sbjct 4396 ATCTTTTGCTTGACATTGT--CGATGGAGTCGG 4366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359966980149546