Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq45 154 2e-32 seq2 132 5e-26 >seq45 Length=1879501 Score = 154 bits (170), Expect = 2e-32 Identities = 301/436 (69%), Gaps = 8/436 (2%) Strand=Plus/Plus Query 16675 TTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTC 16734 ||||||||| || || |||||||||||||| |||||||| | ||||| || | || Sbjct 1418084 TTGGTAATCAGATACACGCTTTTCGAAAAAGTTGGTTTTGCCTTGAAGAGAGATCATGTC 1418143 Query 16735 CATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792 ||| || ||||| ||||| ||||| || || || | ||| |||| || || | | Sbjct 1418144 CATAAAGTCAAATGGATTGGTAGCATTGTAATGCTTGTTGAG-ACCCAAG-GCGACAAGC 1418201 Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTA-ATTCGCAGTTCATTCCTATAAG 16851 || | ||| || |||||||| || ||||| ||||| | || ||| ||||| || || || Sbjct 1418202 AAGCGATCGGCAACAAATTCAATGTATTGACACATGAGCTTGGCA-TTCATACCAATCAG 1418260 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 || |||||||| || ||||| ||| ||| || ||| |||| ||||| ||| || Sbjct 1418261 GGACACGGGAAGAGCATCAGTCAAGAATTCTTGTTCAATAGCAACAGCTTCAACAATGAT 1418320 Query 16912 ACTAGCAACTCGTTCCTCGGACGG-TGTATGTTTAAGATGTTTAAACATCAGACATGCGA 16970 || | || ||||| | ||| || || || || ||| ||| | || ||| || | Sbjct 1418321 ACCAAGAATACGTTCATGGGATGGTTGCTTGCGCAA-ATGAGAAAAGAGCAAACAAGCAA 1418379 Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030 |||| || | || || || | | || || || || ||| ||||| || |||| Sbjct 1418380 AATCAGTGTGAAGACCTTCATCACGGGAAATGAGCTCATTGCTAAAAGTCAAGCCTGGCA 1418439 Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090 | || |||||||| | |||||| || | || || || ||||||||||| || || | Sbjct 1418440 TAAGACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAAAAGAAGATGCCTT 1418499 Query 17091 CGACGGATGCAAACGC 17106 | || | ||||| || Sbjct 1418500 CTACAGCAGCAAAAGC 1418515 >seq2 Length=1153633 Score = 132 bits (146), Expect = 5e-26 Identities = 303/450 (67%), Gaps = 6/450 (1%) Strand=Plus/Minus Query 16675 TTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTC 16734 ||| ||||| || || || || || ||||| || ||||||| ||||| || | || Sbjct 770845 TTGATAATCTGACACTCGCTTCTCAAAGAAGTTGGTCTTGCCCTGAAGAGAAATCATGTC 770786 Query 16735 CATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCA-GTTCGGCGATT 16792 ||| || ||||| ||||| || | ||| ||| || | ||| ||| | | | | Sbjct 770785 CATAAAGTCAAAGGGATTGGTTGAATGATAATGCTT--GTCTACGCCAAGAGCCACCAAA 770728 Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAA-TTCGCAGTTCATTCCTATAAG 16851 | | |||||| |||||||| || || || ||||| | || ||| ||||| || || | Sbjct 770727 AGACGATCCGCCACAAATTCAATGTACTGACACATGAGCTTGGCA-TTCATACCAATCAA 770669 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 | || || | ||| || || || ||| |||||| ||| ||| ||||| |||| || Sbjct 770668 AGAAACAGGTAAAGCATCTGTTAAGAATTCTTGCTCGATATTAACAGCTTCAATAATGAT 770609 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 | | | |||| | || || ||| |||||| ||||| |||||||| || Sbjct 770608 ATCACGGATACGTTGATGAGATGGCTGATGACGAAGATGAGAAAACAAGAGACATGCAAA 770549 Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031 |||| ||||||||| || || | ||||| |||||| ||||| | || ||||| Sbjct 770548 ATCGGTATGTAATCCTTCATCACGTGAAATAAGCTCGTTACTGAATGTAAGACCTGGCAT 770489 Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091 | ||| || || || | |||||| || | || || || ||||||||||| || || || Sbjct 770488 CAATCCACGCTTTTTGAGCCAAAAGATAGAAGCAAAAGAACCAGAAAAGAAGATGCCTTC 770429 Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGC 17121 || | || || || | || ||||| || Sbjct 770428 CACTGCAGCGAATGCAACTAGACGTTCAGC 770399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545121270320