Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq17 120 2e-22 >seq17 Length=338404 Score = 120 bits (132), Expect = 2e-22 Identities = 226/329 (69%), Gaps = 4/329 (1%) Strand=Plus/Plus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| || | ||| | ||| | |||| | || || | ||| | | ||| | || ||| Sbjct 308722 TTATACTGACATGTTCATATCAATTTTGCCATGAGGATGATAATCTACTACTTCAAAGTC 308781 Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGG 101652 |||| || |||| ||||||||| | | || | |||| | || | ||||| || Sbjct 308782 ATCTACTCTAAAATCATCAATGGAATCGATCTTGCGTGCAATCTTGAGCTTAGGAAATGG 308841 Query 101653 TCTAGGAGTTCGCGT-CAACT-GCATTTTAAGAGCATCAATGTGATCTACATAGATGTGA 101710 | || ||||||| ||| | || ||| |||||||| || || || || || | || Sbjct 308842 ACGTGG--TTCGCGTTCAAGTTGCTGTTTTAGAGCATCGATATGGTCAACGTATACATGC 308899 Query 101711 GCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATG 101770 | ||||| || || || || |||||||| | | || |||||||||||||||||| Sbjct 308900 GTGTCTCCCATCACGTGAATGAATTCTCCAGGTTCCAAATCAGTGACATGAGCAATCATC 308959 Query 101771 CAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGAT 101830 | || || |||| ||| |||||||| ||||| || || | |||||||| |||| Sbjct 308960 CTTGTCAAGAGAGCATAAGATGCAATGTTGAATGGAACACCAAGACCCATATCGCATGAT 309019 Query 101831 CTTTGATACAGTTGACAGGAAAGCTTTCC 101859 || ||||||| | ||||||||| | ||| Sbjct 309020 CTCTGATACATTGCACAGGAAAGTTGTCC 309048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250874196574