Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq73 253 2e-62 seq12 221 1e-52 seq45 149 7e-31 seq2 98.7 1e-15 >seq73 Length=1220876 Score = 253 bits (280), Expect = 2e-62 Identities = 1323/2101 (63%), Gaps = 43/2101 (2%) Strand=Plus/Minus Query 52846 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTT 52905 ||||||||| || || || || || ||||||| ||||| ||||||||||| || || Sbjct 415956 ATAGTACATGCCGGTCTTGAGCCCCTTTTTCCATCCATAAAAGTGCATACTTGTGAGCTT 415897 Query 52906 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 52965 | | | | || || | || |||||||| | |||||| ||||| || ||||| || Sbjct 415896 GCCAAAGTTGGGTTCGCCAATGAAGATATTCAAACTTTGACTCTGATCAATAAAGGCACC 415837 Query 52966 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 53025 | || |||||||| | ||||| |||||| | |||||||| ||| || |||| Sbjct 415836 ACGATCAGCAGCCATATCAATGATGACACGTTGTGGTAGTTCCCAAACAGTCTTGTAAAG 415777 Query 53026 TCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATAGATCCACCATCTACCATAAT 53082 ||| | ||| || |||| | | | | |||||||| || ||| ||| || Sbjct 415776 ATTCTTCAAATCATCAGGAATGATAGGCACACGTTGAATAGAGCCGTTGTCTGACATGAT 415717 Query 53083 CCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGG 53142 | ||||||||| ||||| ||||| | | || ||| | | | | || Sbjct 415716 CATATTCTTGACATCATCGTTCCAGATACCACGTTCCACCAAATCCTTCAACAACCATGG 415657 Query 53143 ATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGG 53202 ||| || | ||| ||||| |||| ||| || | || || || | || || || || Sbjct 415656 ATTGACAATTTGGAATTCACCAGCCAAGACACGACGTGTATACAAGTTGGATGTGTAAGG 415597 Query 53203 TTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 53262 ||| | | || || || | || || | || |||||||| |||||||| || || Sbjct 415596 TTCAAAGCATTCGTTGAAACCAAGGATCTGTGATGTGGATGCAGTAGGCATAGGAGCTAC 415537 Query 53263 CAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAG--AGGTTCCCAAT 53318 ||| | ||| | | ||| ||| | | | ||| || || || | || ||||| Sbjct 415536 CAAAAGTGAATTGCGTAAACC--ATGCTTGGCTACTTTTTCCTTGAGCAAAGT--CCAAT 415481 Query 53319 TCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGT 53378 ||| | ||| | ||| || ||| | ||| || || Sbjct 415480 CCCATAAATCAGTAGGTGTCACACCCCACAAGTCATATTGCAATTGACCCTTGGATGCAG 415421 Query 53379 ACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA 53438 || ||| | || || || | || || |||| | |||| || || | Sbjct 415420 GAGAACCTTGGAAAGTCTCATAAGCACCATCACGTGCAGCCAATTCAGTCGATGCTTCCA 415361 Query 53439 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGC-T 53496 ||| | | |||||||||||| ||||||| | ||| || | |||| |||| ||||| Sbjct 415360 CAGCAGCATGATAAATGGTTTCAAAGATCTGCAAATTAAGTTGCTTG-GCTT-CAGGCGA 415303 Query 53497 ATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGAT 53556 ||||||||| || | | || || || || || | ||||||||||| | ||| || Sbjct 415302 ATCAAATGGGAAACGCATCAACATGAAAGCATCAGCAAGACCTTGAACACCTAAACCAAT 415243 Query 53557 AGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTAT 53616 ||| | ||| | ||| || ||||||||| || | |||||||||||| || || || Sbjct 415242 AGGACGATGACGACGATTGGATCGTTCAGCTTCAGGCACAGGATAATAATTGATGTCAAT 415183 Query 53617 AATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA 53676 || || || | || | | || ||| |||| | | || |||| ||||| Sbjct 415182 GATCTTGTTCAAATTACACGTTACCACCTTGGTGACATTATGTAACTTTTGAAAGTCAAA 415123 Query 53677 -----------------TTGTCCATC-TATTACAAACATGTTCAATGCAATAGATGCCAG 53718 |||| | | ||||| |||||||||| ||||| Sbjct 415122 GGAAGCAGGAGTATCATGTGTCTTGCGCACCACAAAAGAAGGCAATGCAATACTGGCCAG 415063 Query 53719 ATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACT 53778 ||| || || || || |||| || | | ||| | | || || ||||||||||| || Sbjct 415062 ATTGCATACAGCCACTTCATCAGGAGAAGAATACTCGACAATTTCTGTGCAAAGATTGCT 415003 Query 53779 ACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAG 53838 || |||||||| || || ||||| ||||| || || || |||||||| || | Sbjct 415002 GCATTTGATGGTACCCAAGTTTTGCTGATTGGATTTGCGATTGCATGCATCCTTGTATAA 414943 Query 53839 AATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGC 53898 |||||||| ||||||||| | || | ||| | ||| || | ||| | | || Sbjct 414942 CATGAATGGACCACCAGTTTCTGTTTGTGCTTCCAAAATGGCATACCAAAGTTTTTGTGC 414883 Query 53899 CTTTATTA-TAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACT 53957 ||| | | | || | | ||| | ||| ||| || ||| ||||| Sbjct 414882 CTTGACCACCTTACGTGCA-CGACCTTCACGTTCATATCTCAAGTATAATTCATCAAATG 414824 Query 53958 CGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTC 54017 | || ||||| |||| | |||||||| |||||| ||||| | | ||| || | Sbjct 414823 CATCACCCCATACATCTTGTAATCCAGGTGCTTCATCAGGACAGAAGAGACTCCAATCAC 414764 Query 54018 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 54077 | | || | ||| ||| |||||| | || |||||||| | || ||| | ||| | Sbjct 414763 CATTTTCTTCCACACGTCGCATAAACATGTCTGGAATCCACAAGGCATAAAACAAATCAC 414704 Query 54078 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 54137 | | || || || || || ||||| | ||| | || | | | ||||| Sbjct 414703 GTGCACGATTCTCTTCCTTGCCATGGTTCTTGCGCAAATCCAAAAAGTCAAACACATCAG 414644 Query 54138 AATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 54197 |||||| |||||||| || |||| | | ||||| || ||||| || || ||||| | Sbjct 414643 GATGCCATGGTTCCAAATACATGGCAAATGCACCAGGTCGCTTGTTACCACCTTGATCCA 414584 Query 54198 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCAT 54257 || | ||| || || || | || | ||||| |||| ||| || ||||| |||| Sbjct 414583 CATAACGAGCTGTATTGTTGAACACACGTAACATGGGAACAATGCCGTTGGAATATCCAT 414524 Query 54258 TGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCC 54317 |||| || | || || |||| | |||||||| || || ||||| || || | Sbjct 414523 TGGTACCAGCAATGTAAGATCCAGTAGCACGAATGTTGTGGATATTAAGACCAATACCAC 414464 Query 54318 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 54377 |||| | || || || || || |||| || ||||| ||||| || || || Sbjct 414463 CTGCTGTCTTGGAAATCTTGGCACAGGTCTTTAGTGTCTCATAAATGCCTTCAATTGAAT 414404 Query 54378 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 54437 ||||| ||||| | | | || ||| ||||| || |||| ||| || ||||| | Sbjct 414403 CATCCTTCATGGTCAACAAGAAGCAGGAAGACAGCTGTGGACGTGGAGTACCAGCATTGA 414344 Query 54438 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAG 54497 | ||||||||| | || ||||| | || || | | | ||| ||||| |||| Sbjct 414343 ACAAGGTAGGACTGCCATGTGTAAAGAAACGCTCCGACATCAAGTGGTAAGTCTCAATAG 414284 Query 54498 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 54557 | || || ||||| ||| || || || || |||||||| | ||| || ||||| | Sbjct 414283 CAGAATCGATATCTTCACCATGGATACCAACAGCAACACGCATAATCATATGTTGAGGAC 414224 Query 54558 TTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 54617 |||| | | ||| || || || ||||| || || ||||| || || || || | Sbjct 414223 GTTCAGCTGTTTTGCCATTGATCTTGAGCAAATAAGAACGCTCCAATGTCTTGAAGCCGA 414164 Query 54618 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATT 54677 || ||||| | ||||| || |||||||| || | |||||||| | || || | Sbjct 414163 AAAAGTTGAAGCTGAAGTCACGATCGTAAATGATGGCAGAGTTGAGCCTGTCAGCATGCT 414104 Query 54678 TGTTAACTACATCCATG-GTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGA 54736 | | || ||| |||| || | ||||| || |||||||| || | || ||| Sbjct 414103 TCATCACCACA-GCATGTGTTTCATCAGAAATCATGGGAGAATGCTTGTTGGTCTTGGGA 414045 Query 54737 TTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGT 54796 || |||||| || ||||| | || ||||| | ||| | || || || || ||||| Sbjct 414044 TTCACATAGCTATGCAAATCATCCACCACTTGAGAAAACACCTTCTTGGTCTCCTTGTGC 413985 Query 54797 AGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG-TTG--TGTAGTA 54853 | || || || || || | || || | | ||||||||| ||||| ||| ||| || Sbjct 413984 AAGTTGGAAACAGCAATACGTGCAGCCAATACGGCATAATCAGGATGCTTGGTTGTCATA 413925 Query 54854 CAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATAT 54913 || || || |||| || | ||| |||| | || || || || || || | |||| Sbjct 413924 TAA---GCAGCAGTTTCAGCAGCAAGATTGTCAAGCTCCACTGTCGTCACACCTTGATAT 413868 Query 54914 A 54914 | Sbjct 413867 A 413867 >seq12 Length=2893134 Score = 221 bits (244), Expect = 1e-52 Identities = 776/1204 (64%), Gaps = 6/1204 (0%) Strand=Plus/Plus Query 53714 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 53773 || ||||| || || || || |||| || | | ||| | | ||||| ||||||||| Sbjct 1077844 GCAAGATTGCATACAGCCACTTCATCAGGACTTGAATACTCGACAATCTCTGTGCAAAGA 1077903 Query 53774 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 53833 || || || |||||||| || || ||||| ||||| || || || |||||||| Sbjct 1077904 TTGCTGCATTTGATGGTGCCCAAGTTTTGCTGATTGGATTTGCGATTGCATGCATCCTTG 1077963 Query 53834 TAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACA 53893 || | |||||||| |||||||||| | || | ||| | || || | ||| | Sbjct 1077964 TATAACATGAATGGACCACCAGTTTCAGTTTGTGCTTCCAAGATAGCATACCAAAGCTTT 1078023 Query 53894 CGAGCCTTTATTATAG-ATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTC 53952 | ||||| | | | || | || || | | || ||| | |||||| || Sbjct 1078024 TGTGCCTTGACAACCTTACGTGCACGTCCTT-CACGCTCATATTGGTGATACAACTCCTC 1078082 Query 53953 AAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 54012 ||| || | ||||||||| | | ||||||||| |||| || || | | ||| Sbjct 1078083 AAATTCTTTTCCCCAAACTTCATGCAATCCAGGTGCTTCACTTGGGCAAAAGAGACTCCA 1078142 Query 54013 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 54072 || || | |||| || |||| ||| || | || |||||||| | || ||| | Sbjct 1078143 ATCACCATTTTCCTCAACACGTTGCATGAACAAGTCTGGAATCCACAAGGCATAAAACAA 1078202 Query 54073 ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 54132 ||| | | | || ||| || || || ||||| | ||| | || | | | Sbjct 1078203 ATCACGTGCACGATTTTCTTCTTTGCCATGGTTCTTGCGTAAATCCAAAAAGTCAAAGAC 1078262 Query 54133 ATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTG 54192 ||||| |||||| ||||| | || |||| | | ||||| || ||||| || || || Sbjct 1078263 ATCAGGATGCCATGGTTCAAGATAGATGGCAAATGCACCAGGTCGCTTGTTACCACCTTG 1078322 Query 54193 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 54252 ||| | || | ||| || || || || || | | ||| || | ||| |||||||| Sbjct 1078323 ATCCACATAGCGAGCAGTATTGTTGTATACACGTAGCATGGGCACAATGCCATTGGAATA 1078382 Query 54253 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 54312 |||||||| || | ||||| ||| |||||||| || || ||||| || Sbjct 1078383 GCCATTGGTACCAGCAATATATGAGCCAGATGCACGAATGTTGTGGATATTAAGACCAAT 1078442 Query 54313 CCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 54372 || |||||| | || || || | ||| || | || ||||||||||| || || Sbjct 1078443 ACCACCTGCCGTCTTTGAAATCTGGGAGCAAATCTTGAGTGTCTCATAGATGCCTTCAAT 1078502 Query 54373 ACTATCATCCATCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 54431 || ||| |||| || || ||||| | | || | ||| ||||| || || | Sbjct 1078503 GGAGTCTTCCTTCATAGTCAACAAGAAACATGAT-GATAATTGTGGACGAGGTGTGCCGG 1078561 Query 54432 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCT 54491 |||| || | || ||| || || || || | || || | | ||||| || | Sbjct 1078562 CATTGAAAAGTGTTGGACTGGCATGTGTGAAATAGCGCTCGGACATCAAGTTGTAAGTTT 1078621 Query 54492 CGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCT 54551 | || || | || || || |||||| || ||||| |||||||| |||||||| | Sbjct 1078622 CAATGGCAGCATCAATGTCTTCACCATGAATACCAACTGCAACACGCATCAACATGTGTT 1078681 Query 54552 GAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAA 54611 | || | ||| | |||||| || || || ||||| ||||| ||||| || || | Sbjct 1078682 GTGGACGTTCTGCAATCTTGCCATTGATCTTGAGCAAATAGGAACGCTCCAATGTCTTGA 1078741 Query 54612 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCT 54671 |||||||| ||||||| || || || || || || || | || |||||| ||| Sbjct 1078742 AACCAAAAAAGTTGTAGCCGAAATCACGATCATAGATGATGGCAGAATTGAGTCGATCAG 1078801 Query 54672 TATATTTGTTAACTACATCCATG-GTAATACTTGAAATAATCGGAGAATGTTTCCCATTT 54730 || || | | | ||| ||| || | || || || || |||||||| | Sbjct 1078802 CATTCTTCATGATGATATC-ATGTGTCGCATCAGAGATCATGGGTGAATGTTTGTTGGTC 1078860 Query 54731 TTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCT 54790 || |||||||||||| | | || | || |||| ||| | ||||| |||||| Sbjct 1078861 TTGGGATTGACATAGCTGTGCAGGTCATCCACTACTTGTGAAAAGACCTTTTTGGTTTCT 1078920 Query 54791 TTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTA 54850 ||||||||||| || | ||| || | ||| || ||||| || ||||| ||||| |||| Sbjct 1078921 TTGTGTAGATTGGAAATGGCAATACGAGCTGCAAGAATAGCGTAATCAGGATGGCGTGTT 1078980 Query 54851 GTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 54910 || | || ||| |||| || | || |||| | || || || || ||||| | | Sbjct 1078981 GTCATATAAGCAGCTGTTTCAGCAGCAAGGTTGTCTAGCTCCACAGTAGTGACTCCTTGA 1079040 Query 54911 TATA 54914 |||| Sbjct 1079041 TATA 1079044 >seq45 Length=1879501 Score = 149 bits (164), Expect = 7e-31 Identities = 304/447 (68%), Gaps = 6/447 (1%) Strand=Plus/Plus Query 23846 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 23905 |||||| ||| ||||| ||||||||||| || ||||| |||| | || || | || Sbjct 1418084 TTGGTAATCAGATACACGCTTTTCGAAAAAGTTGGTTTTGCCTTGAAGAGAGATCATGTC 1418143 Query 23906 CATGAAATCGGATGGATTGGTAACATTATAGATTCTT-TTAAATCCCAATTCAGAAATCA 23964 ||| || || ||||||||||| |||| || || ||| || | ||||| | || || Sbjct 1418144 CATAAAGTCAAATGGATTGGTAGCATTGTA-ATGCTTGTTGAGACCCAAGGCGACAAGCA 1418202 Query 23965 ATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 24024 | | ||| || ||||| || || ||| ||| | | |||||| || || || Sbjct 1418203 AGCGATCGGCAACAAATTCAATGTATTGACACATGAGCTTGGCATTCATACCAATCAGGG 1418262 Query 24025 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 24084 || |||||||| |||| | |||||||||||||||| || || || || ||| Sbjct 1418263 ACACGGGAAGAGCATCAGTCAAGAATTCTTGTTCAATAGCAACAGCTTCAACAATGATAC 1418322 Query 24085 --ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 24142 | ||| ||| | ||| | | ||||| ||| | |||||| || || Sbjct 1418323 CAAGAATACG--TTCATGGGATGGTTGCTTGCGCAAATGAGAAAAGAGCAAACAAGCAAA 1418380 Query 24143 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 24202 ||| ||| ||||| || || | ||| | || ||| ||| || | || ||||| Sbjct 1418381 ATCAGTGTGAAGACCTTCATCACGGGAAATGAGCTCATTGCTAAAAGTCAAGCCTGGCAT 1418440 Query 24203 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 24262 || ||||| || || |||||||| ||||| ||||| || ||||||||||| || ||||| Sbjct 1418441 AAGACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAAAAGAAGATGCCTTC 1418500 Query 24263 TACTGCCGCAAAGGCAATAAGTCTTTC 24289 ||| || ||||| |||| ||| | ||| Sbjct 1418501 TACAGCAGCAAAAGCAACAAGACGTTC 1418527 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/167 (72%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 24384 ttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATG 24443 ||||| | | ||| || | ||| || ||||||||||||||||| | || || || ||| Sbjct 1418701 TTTTCTTGAGAATCCTTGATATAAGTGTCAATCAAAAGACTATAAGTCTCAGAGTGGATG 1418760 Query 24444 TTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATA 24503 |||||||| ||||| ||||| |||||||| | || || | ||| || ||||| | Sbjct 1418761 TTTTCAATCATGATTTGGAATCCATAGAAACACTTGGCTTCAGCAATTTGGACTTCGTTG 1418820 Query 24504 CAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC---ACTGGC 24547 || || || || | | ||| ||||| || || || || |||||| Sbjct 1418821 CAGAAACGCTCCACAAGATTCTCATTGACGATACCATCCGAACTGGC 1418867 >seq2 Length=1153633 Score = 98.7 bits (108), Expect = 1e-15 Identities = 225/335 (67%), Gaps = 9/335 (3%) Strand=Plus/Minus Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416 || || ||||||| |||||| | |||||| | | ||| || | ||| || |||||| Sbjct 770272 GTTTCAATAGCATCAAAGAGCATTTCTTTTTCTTGAGGATCCTTGATATAAGTGTCAATC 770213 Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476 |||||||| || | || || |||||||||||||| || || ||||| ||||| || Sbjct 770212 AAAAGACTGTAAGTCTCAGAGTGAATGTTTTCAATCATGATCTGGAATCCATAGAAGCAC 770153 Query 24477 CTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536 | || || | ||| || ||||| | || || || ||| | | ||| ||||| || || Sbjct 770152 TTGGCTTCAGCAATTTGGACTTCGTTGCAGAAACGCTCTACAAGATTCTCATTGACGATA 770093 Query 24537 CCGTC---ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TG 24591 || || |||| ||||| || || | ||| | ||||| | ||| || || Sbjct 770092 CCATCCGAACTG---GCAAAGAAAGCAAGCACACGAGAGATAAAGAAACGTTCATCCTTG 770036 Query 24592 GTGTTAGT-TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 24650 || | | || | ||| || || || || || | ||| | || || ||||||| Sbjct 770035 GTCATCTTGTTCTCCCAGTCGTTTTGGTCCTTGGAAAGATCAATCTCCTCTGCTGTCCAG 769976 Query 24651 AATGATGCCTCTGCCTTTTTATACATATTCCAGAT 24685 || || || ||||| ||||| || | | |||||| Sbjct 769975 AAAGAAGCTTCTGCTTTTTTGTAAAACTGCCAGAT 769941 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 24125 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 24184 ||||| | |||||| |||||| |||| || || || | ||| | ||||| Sbjct 770566 AAACAAGAGACATGCAAAATCGGTATGTAATCCTTCATCACGTGAAATAAGCTCGTTACT 770507 Query 24185 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 24244 || || || || ||||| | ||||||||||| |||||||| || || ||||| || || Sbjct 770506 GAATGTAAGACCTGGCATCAATCCACGCTTTTTGAGCCAAAAGATAGAAGCAAAAGAACC 770447 Query 24245 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 ||||||||| || ||||| ||||| || || |||| Sbjct 770446 AGAAAAGAAGATGCCTTCCACTGCAGCGAATGCAA 770412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721050807520