Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 seq1 91.5 1e-13 >seq4 Length=1091430 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| ||||| |||||||| ||| || | | Sbjct 753715 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACCATTACTTTGGAAGTTGAGTCTTCT 753774 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | || ||||| | || || || || |||||| | || ||| || Sbjct 753775 GATTCTATTGAAAATGTCAAGAACAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAG 753834 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | |||||||| ||||||||| | |||||| | ||| || | || ||||| Sbjct 753835 CAACGTTTGATCTTTGCAGGCAAACAACTTGAAGATGGCCGTACTTTGTCTGACTACAAC 753894 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 || ||||||||||||||||||||| ||||| Sbjct 753895 ATCCAAAAGGAATCTACTCTTCACTTGGTG 753924 >seq1 Length=3088551 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 25111 TCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTG 25170 ||||| | || ||| || || ||||| | ||| |||||| ||| | || ||||||| Sbjct 605641 TCAAGAACAAGATTCAAGACAAGGAAGGCATTCCCCCAGATCAGCAACGTCTCATCTTTG 605700 Query 25171 CGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTA 25230 | ||||||||| | |||||| ||| || | || ||||| ||||||||||| |||| Sbjct 605701 CAGGCAAACAACTTGAAGATGGTCGTACTTTGTCAGACTACAACATTCAAAAGGAGTCTA 605760 Query 25231 CTCTTCACATGGT 25243 |||||||| |||| Sbjct 605761 CTCTTCACTTGGT 605773 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 ||||| ||||| | || ||| || || | || |||||||| ||||||||| | ||| Sbjct 605886 GATAAGGAAGGCATTCCTCCAGACCAGCAGCGTCTCATCTTTGCAGGCAAACAACTTGAA 605945 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGT 25243 ||| ||| || | || |||||||| ||||||||||||||||||||| |||| Sbjct 605946 GATGGTCGTACTTTGTCAGACTACAATATCCAAAAGGAATCTACTCTTCACTTGGT 606001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796429512636