Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq17 134 1e-26 >seq17 Length=338404 Score = 134 bits (148), Expect = 1e-26 Identities = 196/275 (71%), Gaps = 4/275 (1%) Strand=Plus/Plus Query 96951 AATGTCATTTGCTTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGG 97010 || ||||| | || ||||||||||||| || | ||||| | |||| ||| || | || Sbjct 308776 AAAGTCATCTACTCTAAAATCATCAATGGAATCGATCTTGCGTGCAATCTTGAGCTTAGG 308835 Query 97011 GAAAGGCCTGGGAGTTCGCGT--AAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAA 97068 || || | | |||||||| ||| |||| | | |||||||| || || | || || Sbjct 308836 AAATGGAC--GTGGTTCGCGTTCAAGTTGCTGTTTTAGAGCATCGATATGGTCAACGTAT 308893 Query 97069 ATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCG 97128 | || | ||||| | |||||| ||||||||||| | |||||||||||||| || Sbjct 308894 ACATGCGTGTCTCCCATCACGTGAATGAATTCTCCAGGTTCCAAATCAGTGACATGAGCA 308953 Query 97129 ATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCA 97188 ||||| | || || |||| ||| |||||||| || || || || || |||||||| Sbjct 308954 ATCATCCTTGTCAAGAGAGCATAAGATGCAATGTTGAATGGAACACCAAGACCCATATCG 309013 Query 97189 GCTGATCTTTGATATAACTGACAGGAAAGCTTTCC 97223 |||||| ||||| | ||||||||| | ||| Sbjct 309014 CATGATCTCTGATACATTGCACAGGAAAGTTGTCC 309048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783687244180