Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq9 123 4e-23 seq1 113 7e-20 >seq9 Length=614693 Score = 123 bits (136), Expect = 4e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 ||||||||||| ||| | ||||| || || || || || || || | || | ||| || Sbjct 95217 ACAATGCAAATCTTTGTCAAGACTCTCACTGGAAAGACCATCACATTGGAAGTAGAATCA 95276 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 |||| | ||| || | || || || || || || || ||||| || || || || Sbjct 95277 TCTGATTCTATTGAAAACGTCAAGCAAAAGATCCAGGACAAGGAAGGAATTCCTCCGGAC 95336 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || ||| | || ||||| || || |||||| | || ||| |||| ||| | ||||| Sbjct 95337 CAGCAACGTCTCATTTTCGCTGGCAAACAACTTGAAGATGGTCGTACACTTTCCGATTAC 95396 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||| || || ||||| |||||||| | || ||||| |||||||| Sbjct 95397 AATATTCAAAAGGAGTCGACTTTACATTTGGTGCTTCGCTTACGTGGTGGTAT 95449 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || ||||| ||||| || | || | ||| | Sbjct 95448 ATGCAAATCTTTGTCAAGACTCTTACTGGCAAGACTATCACACTTGAAGTGGAATCGTCC 95507 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||| | ||| ||| | || | || |||||||| || |||||||| || |||||||| Sbjct 95508 GATTCTATTGAGAATGTCAAGAACAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 95567 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | ||||| || || ||||| | || || | || || | ||||| || Sbjct 95568 CAACGTTTGATTTTCGCTGGCAAACAGCTTGAAGACGGCCGTACTCTTTCTGATTACAAC 95627 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 || ||||||||||| || ||||| ||||| ||||| || || || ||| Sbjct 95628 ATCCAAAAAGAATCCACGTTGCACTTGGTATTACGCTTGCGTGGCGGT 95675 >seq1 Length=3088551 Score = 113 bits (124), Expect = 7e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| | || ||||| ||||| ||| | || |||| || | Sbjct 606021 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACTATCACTTTGGAAGTTGAGTCATCT 606080 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||| | ||| ||| | || | || || |||||||| ||||| || || || || || Sbjct 606081 GATTCTATTGAGAATGTCAAGAACAAGATCCAAGATAAGGAAGGCATTCCTCCAGACCAG 606140 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||||||||| ||| | || ||| |||| || || ||||| || Sbjct 606141 CAACGCTTGATCTTTGCAGGAAAGCAACTCGAAGATGGTCGTACTTTGTCTGATTACAAC 606200 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| || || ||| | || ||||| | ||| | || |||||||| Sbjct 606201 ATTCAAAAGGAGTCTACTCTTCACTTGGTCCTTCGTCTTCGTGGTGGTAT 606250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455301203200