Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq2 179 3e-40 >seq2 Length=1153633 Score = 179 bits (198), Expect = 3e-40 Identities = 303/436 (69%), Gaps = 2/436 (0%) Strand=Plus/Minus Query 15946 TTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTC 16005 |||||| || |||| ||| |||||||| || || || || | | ||||| | || Sbjct 770845 TTGATAATCTGACACTCGCTTCTCAAAGAAGTTGGTCTTGCCCTGAAGAGAAATCATGTC 770786 Query 16006 CATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAA 16065 |||||| ||||| ||||| ||||| ||| | || || || | ||| ||| | Sbjct 770785 CATAAAGTCAAAGGGATTGGTTGAATGATAATGCTTGTCTACGCCAAGAGCCACCAAAAG 770726 Query 16066 TCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTT 16125 | ||||||||||||||| || ||||| ||| | | ||||| || || || Sbjct 770725 ACGATCCGCCACAAATTCAATGTACTGACACATGAGCTTGGCATTCATACCAATCAAAGA 770666 Query 16126 AACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATC 16185 |||||| | || |||||||| || | || || |||||||| |||||||| || ||||| Sbjct 770665 AACAGGTAAAGCATCTGTTAAGAATTCTTGCTCGATATTAACAGCTTCAATAATGATATC 770606 Query 16186 TCTTACTACACTATTTAACGGAGGGTTTAATAAG-TGTTTAAACATTATACAAGCAAAAT 16244 | | ||| | | | | | | | ||| || ||||| | ||| ||||||| Sbjct 770605 ACGGA-TACGTTGATGAGATGGCTGATGACGAAGATGAGAAAACAAGAGACATGCAAAAT 770547 Query 16245 CACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTA 16304 | ||| |||||||| || | || | |||||| ||||||||||||||||| | Sbjct 770546 CGGTATGTAATCCTTCATCACGTGAAATAAGCTCGTTACTGAATGTAAGACCTGGCATCA 770487 Query 16305 GTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAA 16364 ||| || ||||| | |||||| |||| ||||| |||||||||||||| || ||||| | Sbjct 770486 ATCCACGCTTTTTGAGCCAAAAGATAGAAGCAAAAGAACCAGAAAAGAAGATGCCTTCCA 770427 Query 16365 CTGCGGCAAATGCAAC 16380 |||| || |||||||| Sbjct 770426 CTGCAGCGAATGCAAC 770411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511572176400