Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq12 98.7 2e-15 >seq12 Length=2893134 Score = 98.7 bits (108), Expect = 2e-15 Identities = 204/297 (69%), Gaps = 14/297 (5%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| | ||| | || |||| |||||| || ||||| || ||| | ||||| || Sbjct 1078766 GATTTCGGCTACAACTTTTTTGGTTTCAAGACATTGGAGCGTTCCTATTTGCTCAAGATC 1078707 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 |||||||||| | ||||| || |||||||||||||| || || || || ||||| Sbjct 1078706 AATGGCAAGATTGCAGAACGTCCACAACACATGTTGATGCGTGTTGCAGTTGGTATTCAT 1078647 Query 248929 AAGGATGACATAGAGAGCGTGC--TCGAGACGTACACCGGAATGAGTGAACGCTGGATGA 248986 || ||||| || || ||| | || || |||| | ||| || |||| | | Sbjct 1078646 GGTGAAGACATTGA-TGC-TGCCATTGAAACTTACAACTTGATGTCCGAGCGCTATTTCA 1078589 Query 248987 CACATGCCACACCGACGCTCTTCAACGCCGGTAC----CGTCAACAATCAGCTGAGCTCG 249042 ||||||||| || || || ||||| ||||| || |||| ||||| | | || Sbjct 1078588 CACATGCCAGTCCAACACTTTTCAATGCCGGCACACCTCGTCCACAATTATC----ATCA 1078533 Query 249043 TGCTTTCTTCTTG-CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA 249098 || |||||| ||| | ||| | || ||||| | || ||||| ||||| || || || Sbjct 1078532 TG-TTTCTTGTTGACTATGAAGGAAGACTCCATTGAAGGCATCTATGAGACACTCAA 1078477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765381935232