Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq2 116 4e-21 >seq2 Length=1153633 Score = 116 bits (128), Expect = 4e-21 Identities = 298/454 (66%), Gaps = 0/454 (0%) Strand=Plus/Minus Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974 |||||| || |||| || ||||||||||| || || || | || || || | || Sbjct 770845 TTGATAATCTGACACTCGCTTCTCAAAGAAGTTGGTCTTGCCCTGAAGAGAAATCATGTC 770786 Query 13975 CATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAA 14034 |||||| ||||| ||||| ||||| | | || || || || | | | | Sbjct 770785 CATAAAGTCAAAGGGATTGGTTGAATGATAATGCTTGTCTACGCCAAGAGCCACCAAAAG 770726 Query 14035 TCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 14094 | |||||| | || ||||| || ||| |||| | | ||||||||| || | Sbjct 770725 ACGATCCGCCACAAATTCAATGTACTGACACATGAGCTTGGCATTCATACCAATCAAAGA 770666 Query 14095 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 14154 ||||| | || ||||| ||||||| || ||| ||||| || | || ||| Sbjct 770665 AACAGGTAAAGCATCTGTTAAGAATTCTTGCTCGATATTAACAGCTTCAATAATGATATC 770606 Query 14155 CGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATC 14214 ||| || || ||| || ||| ||||| ||| | | ||| |||||||| Sbjct 770605 ACGGATACGTTGATGAGATGGCTGATGACGAAGATGAGAAAACAAGAGACATGCAAAATC 770546 Query 14215 ACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAA 14274 ||| | || ||||| | |||||| ||||| ||||| | ||||||||||| Sbjct 770545 GGTATGTAATCCTTCATCACGTGAAATAAGCTCGTTACTGAATGTAAGACCTGGCATCAA 770486 Query 14275 TCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAAC 14334 ||| || ||||| | |||||| || | ||| || || || |||||||| || || || || Sbjct 770485 TCCACGCTTTTTGAGCCAAAAGATAGAAGCAAAAGAACCAGAAAAGAAGATGCCTTCCAC 770426 Query 14335 TGCAGCAAACGCTATTAATCGTTCTCCAAACGAT 14368 |||||| || || | || ||||| |||| ||| Sbjct 770425 TGCAGCGAATGCAACTAGACGTTCAGCAAAAGAT 770392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345153830320