Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 seq9 82.4 6e-11 >seq4 Length=1091430 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 24824 TTAACATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCG 24883 || ||| |||||| || ||||| || || | |||||||| || || || | || |||| Sbjct 753251 TTTACACCATGCAAATCTTTGTCAAGACACTTACCGGCAAGACTATCACTTTGGAAGTCG 753310 Query 24884 AATCGAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGG 24943 | || || | |||| || ||| | || || | || |||||| | || Sbjct 753311 AGTCTTCTGATTCCATTGAAAACGTCAAGAACAAGATCCAAGATAAGGAAGGCATTCCTC 753370 Query 24944 TTGACCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACG 25003 |||||||||||||| || | ||| ||||||||||| |||||| ||| || | Sbjct 753371 CAGACCAGCAACGTTTGATCTTTGCAGGCAAACAACTTGAAGATGGTCGTACTTTGTCTG 753430 Query 25004 ATTACAGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 |||||| ||| || || ||| |||| ||||| || ||| | || | || || ||| Sbjct 753431 ATTACAACATCCAAAAGGAGTCCACTCTTCACTTGGTGCTTCGTCTTCGTGGTGGT 753486 >seq9 Length=614693 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || ||||| || || | || ||||| || || || | || || |||||| | Sbjct 95448 ATGCAAATCTTTGTCAAGACTCTTACTGGCAAGACTATCACACTTGAAGTGGAATCGTCC 95507 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | || | ||| ||| | || ||| | || ||||| | || ||| ||| Sbjct 95508 GATTCTATTGAGAATGTCAAGAACAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 95567 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 |||||||| || | || |||||||| || ||||| | ||| | ||||||| | Sbjct 95568 CAACGTTTGATTTTCGCTGGCAAACAGCTTGAAGACGGCCGTACTCTTTCTGATTACAAC 95627 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || || ||||| ||||| | || || || ||||| ||||| || ||| Sbjct 95628 ATCCAAAAAGAATCCACGTTGCACTTGGTATTACGCTTGCGTGGCGGT 95675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418303622742080