Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq73 288 1e-72 seq12 246 4e-60 seq45 152 6e-32 seq1 113 6e-20 seq2 107 2e-18 >seq73 Length=1220876 Score = 288 bits (318), Expect = 1e-72 Identities = 1334/2103 (63%), Gaps = 47/2103 (2%) Strand=Plus/Minus Query 62084 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 62143 ||||||||| || || || || || ||||||| ||||| |||||||| || || || Sbjct 415956 ATAGTACATGCCGGTCTTGAGCCCCTTTTTCCATCCATAAAAGTGCATACTTGTGAGCTT 415897 Query 62144 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62203 | | | | || || | || |||||||| | |||||| ||||| || ||||| || Sbjct 415896 GCCAAAGTTGGGTTCGCCAATGAAGATATTCAAACTTTGACTCTGATCAATAAAGGCACC 415837 Query 62204 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAAC 62263 | || |||||||| | ||||| ||||| | |||||||| ||| || |||| Sbjct 415836 ACGATCAGCAGCCATATCAATGATGACACGTTGTGGTAGTTCCCAAACAGTCTTGTAAAG 415777 Query 62264 TCGCTTAATATCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTACCATAAT 62320 ||| | ||| || |||| | | | | ||||| || || ||| ||| || Sbjct 415776 ATTCTTCAAATCATCAGGAATGATAGGCACACGTTGAATAGAGCCGTTGTCTGACATGAT 415717 Query 62321 CCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGG 62380 | ||||||||| ||||| ||||| | | || ||| | | | | || Sbjct 415716 CATATTCTTGACATCATCGTTCCAGATACCACGTTCCACCAAATCCTTCAACAACCATGG 415657 Query 62381 GTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGG 62440 || || | ||||||||| |||| ||| || | || || || | || || || || Sbjct 415656 ATTGACAATTTGGAATTCACCAGCCAAGACACGACGTGTATACAAGTTGGATGTGTAAGG 415597 Query 62441 TTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 62500 ||| | | || || || | || || | || |||||||| |||||||| || || Sbjct 415596 TTCAAAGCATTCGTTGAAACCAAGGATCTGTGATGTGGATGCAGTAGGCATAGGAGCTAC 415537 Query 62501 CAATAAACTATTTCTAAGACCGTATGTTCTGAT--TTTATCTTTTAG--ATGTTCCCAAT 62556 ||| | ||| | | ||| ||| | | | ||| || || || | || ||||| Sbjct 415536 CAAAAGTGAATTGCGTAAACC--ATGCTTGGCTACTTTTTCCTTGAGCAAAGT--CCAAT 415481 Query 62557 TCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGT 62616 ||| | ||| | ||| ||| |||||| | ||| || || Sbjct 415480 CCCATAAATCAGTAGGTGTCACACCCCACAAGTCATATTGCAATTGACCCTTGGATGCAG 415421 Query 62617 ACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTA 62676 || ||| | || ||||| | || || |||| | || | || || | Sbjct 415420 GAGAACCTTGGAAAGTCTCATAAGCACCATCACGTGCAGCCAATTCAGTCGATGCTTCCA 415361 Query 62677 ATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGAT-CTTGTGCTTCCGGGCTA 62735 ||| | | |||||||||||||||||||| | ||| || | |||| ||||| || | Sbjct 415360 CAGCAGCATGATAAATGGTTTCAAAGATCTGCAAATTAAGTTGCTTG-GCTTCAGGCGAA 415302 Query 62736 TCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATA 62795 |||||||| || | | || || || || || | ||||||||||| | ||| ||| Sbjct 415301 TCAAATGGGAAACGCATCAACATGAAAGCATCAGCAAGACCTTGAACACCTAAACCAATA 415242 Query 62796 GGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 62855 || | ||| | ||| || ||||||||| || | |||||||||||| || || || Sbjct 415241 GGACGATGACGACGATTGGATCGTTCAGCTTCAGGCACAGGATAATAATTGATGTCAATG 415182 Query 62856 ATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT 62915 || || || | ||| | | || ||| |||| | | || |||| ||||| Sbjct 415181 ATCTTGTTCAAATTACACGTTACCACCTTGGTGACATTATGTAACTTTTGAAAGTCAAAG 415122 Query 62916 CGCCCA-------------TCT-----ATTACAAACATGTTCAATGCAACAGATGCCAGA 62957 || ||| | ||||| |||||||| | |||||| Sbjct 415121 GAAGCAGGAGTATCATGTGTCTTGCGCACCACAAAAGAAGGCAATGCAATACTGGCCAGA 415062 Query 62958 TTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 63017 || || || || || |||| || | | ||| | | || || ||||||||||| || Sbjct 415061 TTGCATACAGCCACTTCATCAGGAGAAGAATACTCGACAATTTCTGTGCAAAGATTGCTG 415002 Query 63018 CACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 63077 || ||||| || || || ||||| ||||| || || || |||||||| || | Sbjct 415001 CATTTGATGGTACCCAAGTTTTGCTGATTGGATTTGCGATTGCATGCATCCTTGTATAAC 414942 Query 63078 ATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 63137 ||||||||| ||||||||| | || | ||| | ||| || | ||| | | | ||| Sbjct 414941 ATGAATGGACCACCAGTTTCTGTTTGTGCTTCCAAAATGGCATACCAAAGTTTTTGTGCC 414882 Query 63138 TTTATTATAG-ATTTGTATCTCCTTTCTCTTTCGTATAG--AGTATACAATCGTTCGAAC 63194 || | | | || | |||| | | ||| ||| |||||| || || || Sbjct 414881 TTGACCACCTTACGTGCACGACCTT-CACGTTCATATCTCAAGTATA--ATTCATCAAAT 414825 Query 63195 TCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCT 63254 | || ||||| |||| | |||| ||| |||||| ||||| | | ||| || Sbjct 414824 GCATCACCCCATACATCTTGTAATCCAGGTGCTTCATCAGGACAGAAGAGACTCCAATCA 414765 Query 63255 CCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 63314 || | || | ||| ||| |||||| | || |||||||| | || ||| | ||| Sbjct 414764 CCATTTTCTTCCACACGTCGCATAAACATGTCTGGAATCCACAAGGCATAAAACAAATCA 414705 Query 63315 CTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 63374 | || | || || || || || ||||| | ||| | || | | | |||| Sbjct 414704 CGTGCACGATTCTCTTCCTTGCCATGGTTCTTGCGCAAATCCAAAAAGTCAAACACATCA 414645 Query 63375 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCT 63434 | |||||| |||||||| || ||||| | | ||||| || ||||| || || ||||| Sbjct 414644 GGATGCCATGGTTCCAAATACATGGCAAATGCACCAGGTCGCTTGTTACCACCTTGATCC 414585 Query 63435 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATA-CC 63493 | || | ||| || || || | || | ||||| |||| ||| ||||| || ||| || Sbjct 414584 ACATAACGAGCTGTATTGTTGAACACACGTAACATGGGAACAATGCCGTTGGA-ATATCC 414526 Query 63494 ATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCC 63553 ||||||||| | || || |||| | |||||||| || || ||||| || || Sbjct 414525 ATTGGTACCAGCAATGTAAGATCCAGTAGCACGAATGTTGTGGATATTAAGACCAATACC 414466 Query 63554 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCT 63613 ||||| | || || || || || |||| || ||||| |||||||| || Sbjct 414465 ACCTGCTGTCTTGGAAATCTTGGCACAGGTCTTTAGTGTCTCATAAATGCCTTCAATTGA 414406 Query 63614 ATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATT 63673 |||||| ||||| | | | || ||| ||||| || |||| | ||| || ||||| Sbjct 414405 ATCATCCTTCATGGTCAACAAGAAGCAGGAAGACAGCTGTGGACGTGGAGTACCAGCATT 414346 Query 63674 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 63733 || ||||||||| | || ||||| | || || | | | ||| |||||||| Sbjct 414345 GAACAAGGTAGGACTGCCATGTGTAAAGAAACGCTCCGACATCAAGTGGTAAGTCTCAAT 414286 Query 63734 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 63793 ||| || || ||||| ||| || || || || |||||||| | ||| || ||||| Sbjct 414285 AGCAGAATCGATATCTTCACCATGGATACCAACAGCAACACGCATAATCATATGTTGAGG 414226 Query 63794 TCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 63853 | |||| | ||||| || || || | ||| || || ||||| || || || || Sbjct 414225 ACGTTCAGCTGTTTTGCCATTGATCTTGAGCAAATAAGAACGCTCCAATGTCTTGAAGCC 414166 Query 63854 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATA 63913 ||| ||||| | ||||| || |||||||| || | || |||||| | || || Sbjct 414165 GAAAAAGTTGAAGCTGAAGTCACGATCGTAAATGATGGCAGAGTTGAGCCTGTCAGCATG 414106 Query 63914 TTTGTTAACTATATCCATG-GTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAG 63972 || | || | | |||| || | ||||| || |||||||| || | || | Sbjct 414105 CTTCATCACCACA-GCATGTGTTTCATCAGAAATCATGGGAGAATGCTTGTTGGTCTTGG 414047 Query 63973 GATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGT 64032 |||| |||||| | ||||| |||| ||||| | ||| | || || || ||||||| Sbjct 414046 GATTCACATAGCTATGCAAATCATCCACCACTTGAGAAAACACCTTCTTGGTCTCCTTGT 413987 Query 64033 GTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG-TTG--TGTAG 64089 | | || || | || || | || || | | ||||||||| ||||| ||| ||| Sbjct 413986 GCAAGTTGGAAACAGCAATACGTGCAGCCAATACGGCATAATCAGGATGCTTGGTTGTCA 413927 Query 64090 TACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTAT 64149 || || || || |||| || || ||| |||| | || || || || || || | || Sbjct 413926 TATAA---GCAGCAGTTTCAGCAGCAAGATTGTCAAGCTCCACTGTCGTCACACCTTGAT 413870 Query 64150 ATA 64152 ||| Sbjct 413869 ATA 413867 >seq12 Length=2893134 Score = 246 bits (272), Expect = 4e-60 Identities = 784/1205 (65%), Gaps = 8/1205 (1%) Strand=Plus/Plus Query 62952 GCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 63011 || ||||| || || || || |||| || | | ||| | | ||||| ||||||||| Sbjct 1077844 GCAAGATTGCATACAGCCACTTCATCAGGACTTGAATACTCGACAATCTCTGTGCAAAGA 1077903 Query 63012 TTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 63071 || || || ||||| || || || ||||| ||||| || || || |||||||| Sbjct 1077904 TTGCTGCATTTGATGGTGCCCAAGTTTTGCTGATTGGATTTGCGATTGCATGCATCCTTG 1077963 Query 63072 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 63131 || | ||||||||| |||||||||| | || | ||| | || || | ||| | | Sbjct 1077964 TATAACATGAATGGACCACCAGTTTCAGTTTGTGCTTCCAAGATAGCATACCAAAGCTTT 1078023 Query 63132 CGAGCCTTTATTATAG-ATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTC 63190 | ||||| | | | || | ||||| | | || ||| | |||||| || Sbjct 1078024 TGTGCCTTGACAACCTTACGTGCACGTCCTT-CACGCTCATATTGGTGATACAACTCCTC 1078082 Query 63191 GAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCA 63250 || || | ||||||||| | | ||||| ||| |||| || || | | ||| Sbjct 1078083 AAATTCTTTTCCCCAAACTTCATGCAATCCAGGTGCTTCACTTGGGCAAAAGAGACTCCA 1078142 Query 63251 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 63310 || || | |||| || |||| ||| || | || |||||||| | || ||| | Sbjct 1078143 ATCACCATTTTCCTCAACACGTTGCATGAACAAGTCTGGAATCCACAAGGCATAAAACAA 1078202 Query 63311 ATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 63370 ||| | || | || ||| || || || ||||| | ||| | || | | | Sbjct 1078203 ATCACGTGCACGATTTTCTTCTTTGCCATGGTTCTTGCGTAAATCCAAAAAGTCAAAGAC 1078262 Query 63371 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63430 ||||| |||||| ||||| | || ||||| | | ||||| || ||||| || || || Sbjct 1078263 ATCAGGATGCCATGGTTCAAGATAGATGGCAAATGCACCAGGTCGCTTGTTACCACCTTG 1078322 Query 63431 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATAT 63490 ||| | || | ||| || || || || || | | ||| || | ||| || || || || Sbjct 1078323 ATCCACATAGCGAGCAGTATTGTTGTATACACGTAGCATGGGCACAATGCCATTGGA-AT 1078381 Query 63491 A-CCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTA 63549 | ||||||||||| | ||||| ||| |||||||| || || ||||| | Sbjct 1078382 AGCCATTGGTACCAGCAATATATGAGCCAGATGCACGAATGTTGTGGATATTAAGACCAA 1078441 Query 63550 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTA 63609 | || |||||| | || || || | ||| || | || |||||||||||||| | Sbjct 1078442 TACCACCTGCCGTCTTTGAAATCTGGGAGCAAATCTTGAGTGTCTCATAGATGCCTTCAA 1078501 Query 63610 TGCTATCATCGATCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668 || || || |||| || || ||||| | | || | ||| |||||| || || Sbjct 1078502 TGGAGTCTTCCTTCATAGTCAACAAGAAACATGAT-GATAATTGTGGACGAGGTGTGCCG 1078560 Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728 ||||| || | || ||| || || || || | || || | | ||||| || Sbjct 1078561 GCATTGAAAAGTGTTGGACTGGCATGTGTGAAATAGCGCTCGGACATCAAGTTGTAAGTT 1078620 Query 63729 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63788 ||||| || | || || || |||||| || ||||| |||||||| |||||||| Sbjct 1078621 TCAATGGCAGCATCAATGTCTTCACCATGAATACCAACTGCAACACGCATCAACATGTGT 1078680 Query 63789 TGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63848 || || | ||| |||| ||| || || || | ||| ||||| ||||| || || Sbjct 1078681 TGTGGACGTTCTGCAATCTTGCCATTGATCTTGAGCAAATAGGAACGCTCCAATGTCTTG 1078740 Query 63849 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCC 63908 ||||||||| ||||||| || || || || || || || | |||||||| ||| Sbjct 1078741 AAACCAAAAAAGTTGTAGCCGAAATCACGATCATAGATGATGGCAGAATTGAGTCGATCA 1078800 Query 63909 TTATATTTGTTAACTATATCCATG-GTAATACTTGAAATAATCGGAGAATGTTTCCCATT 63967 || || | | ||||| ||| || | || || || || |||||||| | Sbjct 1078801 GCATTCTTCATGATGATATC-ATGTGTCGCATCAGAGATCATGGGTGAATGTTTGTTGGT 1078859 Query 63968 TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTC 64027 || ||||| |||||| || | || |||| |||| ||| | ||||| ||||| Sbjct 1078860 CTTGGGATTGACATAGCTGTGCAGGTCATCCACTACTTGTGAAAAGACCTTTTTGGTTTC 1078919 Query 64028 CTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGT 64087 ||||||||||| || ||||| || | || || ||||| || ||||| ||||| |||| Sbjct 1078920 TTTGTGTAGATTGGAAATGGCAATACGAGCTGCAAGAATAGCGTAATCAGGATGGCGTGT 1078979 Query 64088 AGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATT 64147 || | || ||| |||| || || || |||| | || || || || ||||| | Sbjct 1078980 TGTCATATAAGCAGCTGTTTCAGCAGCAAGGTTGTCTAGCTCCACAGTAGTGACTCCTTG 1079039 Query 64148 ATATA 64152 ||||| Sbjct 1079040 ATATA 1079044 Score = 150 bits (166), Expect = 2e-31 Identities = 518/804 (64%), Gaps = 17/804 (2%) Strand=Plus/Plus Query 62076 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 62135 || |||| ||||||||| || || || ||||| |||| || ||||| ||||| || Sbjct 1076903 GTGCGTAAATAGTACATGCCAGTCTTAAGACCTTTCTTCCAGCCATAAAAGTGCATGCTA 1076962 Query 62136 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 62195 || | ||| | | | || || | || || |||| |||||| ||||| || Sbjct 1076963 GTCAACTTGCCAAAGTTTGGTTCACCAATGAAAATGTTCAAGCTTTGACTCTGATCAATA 1077022 Query 62196 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTT 62255 | || || | || || ||||| | ||||| || ||| | || ||||| | ||| Sbjct 1077023 TAAGCGCCACGATCGGCTGCCATATCAATGATGGTACGTTGAGAAAGCTCCCATACAGTC 1077082 Query 62256 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCT 62312 || || | ||| | || | ||| | || | || |||||| || ||| |||| Sbjct 1077083 TTGTAGAGATTCTTGAGCTCCTGTGGGATATTGGGTATACGCTGAATCGAGCCATTATCT 1077142 Query 62313 ACCATAATCCTATTCTTGATCTCATCATTCCATA-----ATTTTCTCTCGGTTAAAACTC 62367 ||| ||| ||||||||| | ||||||||||| |||| | | | | || Sbjct 1077143 GACATGATCATATTCTTGACATTATCATTCCATAGACCCATTTCCACAAGATCCT---TC 1077199 Query 62368 TAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAAT-ACTCTCCGAGTGTAAATA 62426 || | ||| | || || | ||||||||| |||| |||| || | ||||| || | | Sbjct 1077200 AAAAGCCATG--GATTGACAATTTGGAATTCACCAG-CAATCACACGTCGAGTATACAAA 1077256 Query 62427 TTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTC 62486 || || || ||||| | | || || || | ||||| | ||| ||||| || Sbjct 1077257 TTGGATGTGTAAGGTTCAAAGCATTCGTTGAAGCCAAGGATTTGTGAAGTAGATGCTGTA 1077316 Query 62487 GGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGA 62546 |||||||| |||||||| | ||| | |||||| | || || || | || | Sbjct 1077317 GGCATAGGCGCCACCAAGAGTGAATTACGAAGACCATTCTTTGCAATCTTTTGCTTCAAT 1077376 Query 62547 TGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCG 62606 | |||||| |||||||| || || ||| |||||| || || Sbjct 1077377 TCAGCCCAATCCCAAAGATTTGATGGCGTAACTCCCCATAGATCATATTGAAGTTGTCCT 1077436 Query 62607 TTACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAA 62666 || || ||||| ||||||| ||||| | || ||| |||| |||| ||| Sbjct 1077437 TTGGAAGCAGGTGATCCATCATATGTCTCATAAGTACCATCCACAGCAGCAAGTTCGCAA 1077496 Query 62667 CTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAG-ATCTTGTGC 62725 ||||| |||||| | | ||| || ||||||||||| | | |||| || ||||| || Sbjct 1077497 GATGCCTCCAATGCAGCATGATAGATTGTTTCAAAGATTTGCGTATTGAGCTTCTTG-GC 1077555 Query 62726 TTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACC 62785 ||| || ||| || |||||| | | ||||| || ||||| | ||||| ||||| Sbjct 1077556 TTCTGGTGAATCGAAAGGATAACGCATCAACATAAAAGCATCCGCCAGACCTTGTACACC 1077615 Query 62786 AATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATT 62845 || ||| || || | ||| | ||| || |||||||| | ||||||||| || Sbjct 1077616 AAGACCAATGGGACGATGACGGCGATTTGAACGCTCAGCTTCCACGACAGGATAATAGTT 1077675 Query 62846 AATATCTATAATTTTATTGAGATT 62869 ||||| || || || |||||||| Sbjct 1077676 GATATCAATGATCTTGTTGAGATT 1077699 >seq45 Length=1879501 Score = 152 bits (168), Expect = 6e-32 Identities = 299/440 (68%), Gaps = 4/440 (1%) Strand=Plus/Plus Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 |||||| ||| ||||| ||||||||||| || ||||| |||| | || || | || Sbjct 1418084 TTGGTAATCAGATACACGCTTTTCGAAAAAGTTGGTTTTGCCTTGAAGAGAGATCATGTC 1418143 Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAA 33412 ||| || ||||| ||||||||| |||||||| || || | ||||| | || ||| Sbjct 1418144 CATAAAGTCAAATGGATTGGTAGCATTGTAATGCTTGTTGAGACCCAAGGCGACAAGCAA 1418203 Query 33413 TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 33472 | ||| || || ||||| || ||| ||| | | |||||| || || || Sbjct 1418204 GCGATCGGCAACAAATTCAATGTATTGACACATGAGCTTGGCATTCATACCAATCAGGGA 1418263 Query 33473 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA-- 33530 || |||||||| |||| | |||||||||||||| | || || | || ||| Sbjct 1418264 CACGGGAAGAGCATCAGTCAAGAATTCTTGTTCAATAGCAACAGCTTCAACAATGATACC 1418323 Query 33531 AATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAA 33590 || ||| ||| | ||| | | ||||| ||| | |||||| || ||| Sbjct 1418324 AAGAATACG--TTCATGGGATGGTTGCTTGCGCAAATGAGAAAAGAGCAAACAAGCAAAA 1418381 Query 33591 TCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATT 33650 || ||| ||||| || || | ||| | || || ||| || | || ||||| Sbjct 1418382 TCAGTGTGAAGACCTTCATCACGGGAAATGAGCTCATTGCTAAAAGTCAAGCCTGGCATA 1418441 Query 33651 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCT 33710 || ||||| || || |||||||| |||||||| || || || ||||||||||| |||||| Sbjct 1418442 AGACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAAAAGAAGATGCCTTCT 1418501 Query 33711 ACTGCAGCAAAGGCAATAAG 33730 || |||||||| |||| ||| Sbjct 1418502 ACAGCAGCAAAAGCAACAAG 1418521 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 33804 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 33863 ||||| || || | |||||| | ||||| | | ||| || | |||||| || ||| Sbjct 1418674 GTTTCAATCGCGTCAAAGAGCATTTCCTTTTCTTGAGAATCCTTGATATAAGTGTCAATC 1418733 Query 33864 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 33923 ||||||||||| | || || || ||||||||||| || || ||||| |||||||| Sbjct 1418734 AAAAGACTATAAGTCTCAGAGTGGATGTTTTCAATCATGATTTGGAATCCATAGAAACAC 1418793 Query 33924 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 33983 | || || | ||| || ||||| | || || || || | | ||| ||||| || || Sbjct 1418794 TTGGCTTCAGCAATTTGGACTTCGTTGCAGAAACGCTCCACAAGATTCTCATTGACGATA 1418853 Query 33984 CCATC---ACTGGC 33994 ||||| |||||| Sbjct 1418854 CCATCCGAACTGGC 1418867 >seq1 Length=3088551 Score = 113 bits (124), Expect = 6e-20 Identities = 249/370 (67%), Gaps = 20/370 (5%) Strand=Plus/Minus Query 63443 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACC 63502 ||| || | ||| || || | |||||| |||| ||| || || ||| ||||||||||||| Sbjct 749128 AGCAGTATCATTGTATACGCGCAACATGGGAACAATGCCATTGGATGTACCATTGGTACC 749069 Query 63503 GGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAG-----ACCTATTCCCCCT 63557 | ||||| ||| ||||||||| || ||| || ||| | || || Sbjct 749068 AGCAATATAAGAACCAGAGGCACGAATCTT-----TTGGAAGCTGCAACCAACACCACCA 749014 Query 63558 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCA 63617 || ||| || || || || | | || ||||| |||||||| ||||||||| Sbjct 749013 GCGGATTTGGATATGCGAGCACAAGTCATCAGGGTATCATAAATGCCTTCAATGCTATCA 748954 Query 63618 TCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAAT 63677 || |||| | | ||| ||||||| || | |||| |||||| || || ||||| || Sbjct 748953 TCTCTCATTTGTACAAGATAACAGCTGGATAATTGGGGACGAGGTGTACCAGCATTGAAA 748894 Query 63678 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT-GTACGTCTCAATAGC 63736 | || |||| ||||| ||||| | ||| ||| | | ||| || || || | ||| Sbjct 748893 AGAGTTGGAGTGGCGTGTGTAAAGTA-TTTGCAGGACATGTATTCATATGTTTCCAAAGC 748835 Query 63737 TGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAG 63792 || || ||||| |||| |||| || | || |||||||| | |||||| |||| Sbjct 748834 TGCATCAATATCTTCACCATGGATG----CCAAGAGCAACACGCATAATCATGTGTTGAG 748779 Query 63793 GTCTTTCAAC 63802 | | |||||| Sbjct 748778 GACGTTCAAC 748769 >seq2 Length=1153633 Score = 107 bits (118), Expect = 2e-18 Identities = 227/335 (68%), Gaps = 9/335 (3%) Strand=Plus/Minus Query 33804 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 33863 ||||| || |||| |||||| | |||||| | | ||| || | |||||| || ||| Sbjct 770272 GTTTCAATAGCATCAAAGAGCATTTCTTTTTCTTGAGGATCCTTGATATAAGTGTCAATC 770213 Query 33864 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 33923 |||||||| || | || || |||||||||||||| ||||| ||||| ||||| || Sbjct 770212 AAAAGACTGTAAGTCTCAGAGTGAATGTTTTCAATCATGATCTGGAATCCATAGAAGCAC 770153 Query 33924 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 33983 | || || | ||| || ||||| | || || || ||| | | ||| ||||| || || Sbjct 770152 TTGGCTTCAGCAATTTGGACTTCGTTGCAGAAACGCTCTACAAGATTCTCATTGACGATA 770093 Query 33984 CCATC---ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TG 34038 ||||| |||| ||||| || || | ||| | ||||| | ||| || || Sbjct 770092 CCATCCGAACTG---GCAAAGAAAGCAAGCACACGAGAGATAAAGAAACGTTCATCCTTG 770036 Query 34039 GTGTTAGT-TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 34097 || | | || | ||| || || || || || | ||| | || || ||||||| Sbjct 770035 GTCATCTTGTTCTCCCAGTCGTTTTGGTCCTTGGAAAGATCAATCTCCTCTGCTGTCCAG 769976 Query 34098 AATGATGCCTCTGCCTTTTTATACATATTCCAGAT 34132 || || || ||||| ||||| || | | |||||| Sbjct 769975 AAAGAAGCTTCTGCTTTTTTGTAAAACTGCCAGAT 769941 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 33572 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGA 33631 ||||| | |||||| |||||| || | || || || | ||| | |||||| Sbjct 770566 AAACAAGAGACATGCAAAATCGGTATGTAATCCTTCATCACGTGAAATAAGCTCGTTACT 770507 Query 33632 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33691 || || || || ||||| | ||||||||||| |||||||| || ||||| || || || Sbjct 770506 GAATGTAAGACCTGGCATCAATCCACGCTTTTTGAGCCAAAAGATAGAAGCAAAAGAACC 770447 Query 33692 GGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 ||||||||||| ||||| |||||||| || |||| Sbjct 770446 AGAAAAGAAGATGCCTTCCACTGCAGCGAATGCAA 770412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817017418720