Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq73 334 1e-86 seq12 203 5e-47 seq45 174 2e-38 seq1 118 2e-21 seq2 98.7 1e-15 >seq73 Length=1220876 Score = 334 bits (370), Expect = 1e-86 Identities = 1343/2100 (64%), Gaps = 41/2100 (2%) Strand=Plus/Minus Query 78756 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTT 78815 ||||||||| || || || || || ||||||| || || |||||||| || || || Sbjct 415956 ATAGTACATGCCGGTCTTGAGCCCCTTTTTCCATCCATAAAAGTGCATACTTGTGAGCTT 415897 Query 78816 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 78875 | | | | || || | || |||||||| | |||||| ||||| || ||||| || Sbjct 415896 GCCAAAGTTGGGTTCGCCAATGAAGATATTCAAACTTTGACTCTGATCAATAAAGGCACC 415837 Query 78876 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 78935 | || |||||||| | ||||| |||||| | |||||||| ||| || |||| Sbjct 415836 ACGATCAGCAGCCATATCAATGATGACACGTTGTGGTAGTTCCCAAACAGTCTTGTAAAG 415777 Query 78936 TCGCTTAATATCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAAT 78992 ||| | ||| || |||| | | | | ||||| || || |||| ||| || Sbjct 415776 ATTCTTCAAATCATCAGGAATGATAGGCACACGTTGAATAGAGCCGTTGTCTGACATGAT 415717 Query 78993 CCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGG 79052 | ||||||||| || || ||||| | | || ||| | | | | || Sbjct 415716 CATATTCTTGACATCATCGTTCCAGATACCACGTTCCACCAAATCCTTCAACAACCATGG 415657 Query 79053 ATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGG 79112 ||| || | ||| ||||| |||| ||| || | || || || | || || || || Sbjct 415656 ATTGACAATTTGGAATTCACCAGCCAAGACACGACGTGTATACAAGTTGGATGTGTAAGG 415597 Query 79113 TTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCAC 79172 ||| | |||| || || | || || | || ||||| || |||||||| || || Sbjct 415596 TTCAAAGCATTCGTTGAAACCAAGGATCTGTGATGTGGATGCAGTAGGCATAGGAGCTAC 415537 Query 79173 CAATAAACTATTTCTAAGACCGTATGATCTGAT--TTTATCTTTTAGAGATTCCCAATCC 79230 ||| | ||| | | ||| ||| | | | ||| || || || | ||||||| Sbjct 415536 CAAAAGTGAATTGCGTAAACC--ATGCTTGGCTACTTTTTCCTTGAGCAAAGTCCAATCC 415479 Query 79231 CAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTAT 79290 || | ||||| || ||| ||| | |||||||| | ||| || || Sbjct 415478 CATAAATCAGTAGGTGTCACACCCCACAAGTCATATTGCAATTGACCCTTGGATGCAGGA 415419 Query 79291 GATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAAT 79350 || ||| | | || ||||||| || || | | || |||||| || || | Sbjct 415418 GAACCTTGGAAAGTCTCATAAGCACCATCACGTGCAGCCAATTCAGTCGATGCTTCCACA 415359 Query 79351 GCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTA-T 79408 || | | |||||||||||| || |||| | ||| || | |||| ||||| |||| | | Sbjct 415358 GCAGCATGATAAATGGTTTCAAAGATCTGCAAATTAAGTTGCTTG-GCTTC-AGGCGAAT 415301 Query 79409 CAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAG 79468 ||||||| || | | || || || || || | ||||||||||| | ||| |||| Sbjct 415300 CAAATGGGAAACGCATCAACATGAAAGCATCAGCAAGACCTTGAACACCTAAACCAATAG 415241 Query 79469 GTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAA 79528 | | ||| | ||| || ||||||||| || | |||||||||||| || || || | Sbjct 415240 GACGATGACGACGATTGGATCGTTCAGCTTCAGGCACAGGATAATAATTGATGTCAATGA 415181 Query 79529 TTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA-- 79586 | || || | ||| | || || ||| |||| | || || |||| ||||| Sbjct 415180 TCTTGTTCAAATTACACGTTACCACCTTGGTGACATTATGTAACTTTTGAAAGTCAAAGG 415121 Query 79587 -----------TCGTCCATCT-----ATTACAAACATGTTCAACGCGACAGATGCCAGAT 79630 || | ||| | ||||| ||| || | | ||||||| Sbjct 415120 AAGCAGGAGTATCATGTGTCTTGCGCACCACAAAAGAAGGCAATGCAATACTGGCCAGAT 415061 Query 79631 TACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTAC 79690 | || || || || |||| || | | ||| | | ||||| ||||| || || || | Sbjct 415060 TGCATACAGCCACTTCATCAGGAGAAGAATACTCGACAATTTCTGTGCAAAGATTGCTGC 415001 Query 79691 ACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 79750 | || ||||| || || ||||| ||||| || || || |||||||| || | | Sbjct 415000 ATTTGATGGTACCCAAGTTTTGCTGATTGGATTTGCGATTGCATGCATCCTTGTATAACA 414941 Query 79751 TGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 79810 |||| ||| ||||||||| | || | ||| | ||| || | ||| | | | |||| Sbjct 414940 TGAATGGACCACCAGTTTCTGTTTGTGCTTCCAAAATGGCATACCAAAGTTTTTGTGCCT 414881 Query 79811 TTATTATAG-ACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCG 79869 | | | || || | | || | | ||| ||| |||||| || || | Sbjct 414880 TGACCACCTTACGTGCACGACCTT-CACGTTCATATCTCAAGTATAATTCATCAAATGCA 414822 Query 79870 TCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCA 79929 || ||||| ||||| | ||||||||| ||| |||||||| | | ||| || ||| Sbjct 414821 TCACCCCATACATCTTGTAATCCAGGTGCTTCATCAGGACAGAAGAGACTCCAATCACCA 414762 Query 79930 TCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 79989 | || | || ||| |||||| | || |||||||| | || ||| | ||| | Sbjct 414761 TTTTCTTCCACACGTCGCATAAACATGTCTGGAATCCACAAGGCATAAAACAAATCACGT 414702 Query 79990 GTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 80049 | | || ||| || || || ||||| | ||| | || | | | ||||| | Sbjct 414701 GCACGATTCTCTTCCTTGCCATGGTTCTTGCGCAAATCCAAAAAGTCAAACACATCAGGA 414642 Query 80050 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATG 80109 ||||| |||||||| || ||||| | | || ||||| ||||| || || ||||| | Sbjct 414641 TGCCATGGTTCCAAATACATGGCAAATGCACCAGGTCGCTTGTTACCACCTTGATCCACA 414582 Query 80110 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 80169 || | ||| || || || | || | ||||| |||| ||| || ||||| |||||| Sbjct 414581 TAACGAGCTGTATTGTTGAACACACGTAACATGGGAACAATGCCGTTGGAATATCCATTG 414522 Query 80170 GTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 80229 || || | || || |||| | |||||||| || || ||||| || || ||| Sbjct 414521 GTACCAGCAATGTAAGATCCAGTAGCACGAATGTTGTGGATATTAAGACCAATACCACCT 414462 Query 80230 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCA 80289 || | || || || || || |||| || ||||| ||||| || || |||| Sbjct 414461 GCTGTCTTGGAAATCTTGGCACAGGTCTTTAGTGTCTCATAAATGCCTTCAATTGAATCA 414402 Query 80290 TCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 80349 || ||||| | | | || ||| ||||| || |||| ||| || ||||| || Sbjct 414401 TCCTTCATGGTCAACAAGAAGCAGGAAGACAGCTGTGGACGTGGAGTACCAGCATTGAAC 414342 Query 80350 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCT 80409 ||||||||| | || ||||| | || |||| | | ||| ||||||||||| Sbjct 414341 AAGGTAGGACTGCCATGTGTAAAGAAACGCTCCGACATCAAGTGGTAAGTCTCAATAGCA 414282 Query 80410 GATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTT 80469 || || ||||| ||| || || || || |||||||| | ||| || ||||| | | Sbjct 414281 GAATCGATATCTTCACCATGGATACCAACAGCAACACGCATAATCATATGTTGAGGACGT 414222 Query 80470 TCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAA 80529 ||| | | ||| ||| || || | ||| ||||| ||||| || || || || ||| Sbjct 414221 TCAGCTGTTTTGCCATTGATCTTGAGCAAATAAGAACGCTCCAATGTCTTGAAGCCGAAA 414162 Query 80530 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTG 80589 ||||| | ||||| || |||||||| || | |||||||| | || || || Sbjct 414161 AAGTTGAAGCTGAAGTCACGATCGTAAATGATGGCAGAGTTGAGCCTGTCAGCATGCTTC 414102 Query 80590 TTAACTACATCCATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 80647 | || ||| ||| ||| | | | ||||| || |||||||| || | || |||| Sbjct 414101 ATCACCACA-GCAT-GTGTTTCATCAGAAATCATGGGAGAATGCTTGTTGGTCTTGGGAT 414044 Query 80648 TAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTA 80707 | |||||| | ||||| |||| ||||| | ||| | || || || |||||||| | Sbjct 414043 TCACATAGCTATGCAAATCATCCACCACTTGAGAAAACACCTTCTTGGTCTCCTTGTGCA 413984 Query 80708 GATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG-TTG--TGTAGTAC 80764 || || || || || | || || || | ||||||||| ||||| ||| ||| || Sbjct 413983 AGTTGGAAACAGCAATACGTGCAGCCAATACGGCATAATCAGGATGCTTGGTTGTCATAT 413924 Query 80765 AAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATA 80824 || || || |||| || || ||| |||| | || || || || || || | ||||| Sbjct 413923 AA---GCAGCAGTTTCAGCAGCAAGATTGTCAAGCTCCACTGTCGTCACACCTTGATATA 413867 >seq12 Length=2893134 Score = 203 bits (224), Expect = 5e-47 Identities = 772/1204 (64%), Gaps = 6/1204 (0%) Strand=Plus/Plus Query 79624 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGG 79683 || ||||| || || || || |||| || | | ||| | | || || ||||| || Sbjct 1077844 GCAAGATTGCATACAGCCACTTCATCAGGACTTGAATACTCGACAATCTCTGTGCAAAGA 1077903 Query 79684 TTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 79743 || || || || ||||| || || ||||| ||||| || || || |||||||| Sbjct 1077904 TTGCTGCATTTGATGGTGCCCAAGTTTTGCTGATTGGATTTGCGATTGCATGCATCCTTG 1077963 Query 79744 TAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 79803 || | ||||| ||| |||||||||| | || | ||| | || || | ||| | | Sbjct 1077964 TATAACATGAATGGACCACCAGTTTCAGTTTGTGCTTCCAAGATAGCATACCAAAGCTTT 1078023 Query 79804 CGAGCCTTTATTATAG-ACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTC 79862 | ||||| | | || || | || || | | || ||||| ||| || || Sbjct 1078024 TGTGCCTTGACAACCTTACGTGCACGTCCTT-CACGCTCATATTGGTGATACAACTCCTC 1078082 Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922 || || | ||||||||| || | |||||||| ||| || || | | ||| Sbjct 1078083 AAATTCTTTTCCCCAAACTTCATGCAATCCAGGTGCTTCACTTGGGCAAAAGAGACTCCA 1078142 Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982 || |||| |||| || |||| ||| || | || |||||||| | || ||| | Sbjct 1078143 ATCACCATTTTCCTCAACACGTTGCATGAACAAGTCTGGAATCCACAAGGCATAAAACAA 1078202 Query 79983 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 80042 ||| | | | || || || || || ||||| | ||| | || | | | Sbjct 1078203 ATCACGTGCACGATTTTCTTCTTTGCCATGGTTCTTGCGTAAATCCAAAAAGTCAAAGAC 1078262 Query 80043 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTG 80102 ||||| |||||| ||||| | || ||||| | | || ||||| ||||| || || || Sbjct 1078263 ATCAGGATGCCATGGTTCAAGATAGATGGCAAATGCACCAGGTCGCTTGTTACCACCTTG 1078322 Query 80103 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 80162 ||| | || | ||| || || || || || | | ||| || | ||| |||||||| Sbjct 1078323 ATCCACATAGCGAGCAGTATTGTTGTATACACGTAGCATGGGCACAATGCCATTGGAATA 1078382 Query 80163 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 80222 |||||||| || | ||||| ||| |||||||| || || ||||| || Sbjct 1078383 GCCATTGGTACCAGCAATATATGAGCCAGATGCACGAATGTTGTGGATATTAAGACCAAT 1078442 Query 80223 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 80282 || |||||| | || || || | ||| || | || ||||||||||| || || Sbjct 1078443 ACCACCTGCCGTCTTTGAAATCTGGGAGCAAATCTTGAGTGTCTCATAGATGCCTTCAAT 1078502 Query 80283 GCTATCATCAATCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 80341 | || || |||| || || || ||||| || | ||| ||||| || || | Sbjct 1078503 GGAGTCTTCCTTCATAGTCAACAAG-AAACATGATGATAATTGTGGACGAGGTGTGCCGG 1078561 Query 80342 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT 80401 |||| || | || ||| || || || || | || |||| | ||||| || | Sbjct 1078562 CATTGAAAAGTGTTGGACTGGCATGTGTGAAATAGCGCTCGGACATCAAGTTGTAAGTTT 1078621 Query 80402 CAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCT 80461 |||| || | || || || |||||| || || || |||||||| |||||||| | Sbjct 1078622 CAATGGCAGCATCAATGTCTTCACCATGAATACCAACTGCAACACGCATCAACATGTGTT 1078681 Query 80462 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAA 80521 | || | ||| | |||||| ||| || || | ||| || || ||||| || || | Sbjct 1078682 GTGGACGTTCTGCAATCTTGCCATTGATCTTGAGCAAATAGGAACGCTCCAATGTCTTGA 1078741 Query 80522 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCT 80581 |||||||| ||||||| || || || || || || || | || |||||| ||| Sbjct 1078742 AACCAAAAAAGTTGTAGCCGAAATCACGATCATAGATGATGGCAGAATTGAGTCGATCAG 1078801 Query 80582 TATATTTGTTAACTACATCCATG-GTGATACTTGAAATAATCGGAGAATGTTTCCCATTT 80640 || || | | | || |||| || | || || || || |||||||| | Sbjct 1078802 CATTCTTCATGATGATAT-CATGTGTCGCATCAGAGATCATGGGTGAATGTTTGTTGGTC 1078860 Query 80641 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCC 80700 || ||||| |||||| || | || |||| |||| ||| | ||||| ||||| Sbjct 1078861 TTGGGATTGACATAGCTGTGCAGGTCATCCACTACTTGTGAAAAGACCTTTTTGGTTTCT 1078920 Query 80701 TTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTA 80760 ||||||||||| || | ||| || | || || | ||| || ||||| ||||| |||| Sbjct 1078921 TTGTGTAGATTGGAAATGGCAATACGAGCTGCAAGAATAGCGTAATCAGGATGGCGTGTT 1078980 Query 80761 GTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 80820 || | || ||| |||| || || || |||| | || || || || ||||| | | Sbjct 1078981 GTCATATAAGCAGCTGTTTCAGCAGCAAGGTTGTCTAGCTCCACAGTAGTGACTCCTTGA 1079040 Query 80821 TATA 80824 |||| Sbjct 1079041 TATA 1079044 Score = 170 bits (188), Expect = 3e-37 Identities = 532/813 (65%), Gaps = 27/813 (3%) Strand=Plus/Plus Query 78748 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTC 78807 || |||| ||||||||| || || || ||||| |||| || || || ||||| || Sbjct 1076903 GTGCGTAAATAGTACATGCCAGTCTTAAGACCTTTCTTCCAGCCATAAAAGTGCATGCTA 1076962 Query 78808 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 78867 || | ||| | | | || || | || || |||| |||||| ||||| || Sbjct 1076963 GTCAACTTGCCAAAGTTTGGTTCACCAATGAAAATGTTCAAGCTTTGACTCTGATCAATA 1077022 Query 78868 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 78927 | || || | || || ||||| | ||||| || ||| | || ||||| | ||| Sbjct 1077023 TAAGCGCCACGATCGGCTGCCATATCAATGATGGTACGTTGAGAAAGCTCCCATACAGTC 1077082 Query 78928 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCT 78984 || || | ||| | || | ||| | || | || |||||| || ||| |||| Sbjct 1077083 TTGTAGAGATTCTTGAGCTCCTGTGGGATATTGGGTATACGCTGAATCGAGCCATTATCT 1077142 Query 78985 GCCATAATCCTATTCTTGATCTCTTCATTCCATA-----ATTTTCTCTCGGTTAAAACTC 79039 | ||| ||| ||||||||| | |||||||||| |||| | | | | || Sbjct 1077143 GACATGATCATATTCTTGACATTATCATTCCATAGACCCATTTCCACAAGATCCT---TC 1077199 Query 79040 TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAAT-ACTCTCCGAGTGTAAATA 79098 || | ||| |||| || | ||| ||||| |||| |||| || | ||||| || | | Sbjct 1077200 AAAAGCCATG--GATTGACAATTTGGAATTCACCAG-CAATCACACGTCGAGTATACAAA 1077256 Query 79099 TTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTT 79158 || || || ||||| | |||| || || | ||||| | ||| ||||| || Sbjct 1077257 TTGGATGTGTAAGGTTCAAAGCATTCGTTGAAGCCAAGGATTTGTGAAGTAGATGCTGTA 1077316 Query 79159 GGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTA 79216 |||||||| |||||||| | ||| | |||||| || | || || || | || | Sbjct 1077317 GGCATAGGCGCCACCAAGAGTGAATTACGAAGACC--ATTCTTTGCAATCTTTTGCTTCA 1077374 Query 79217 GAGATTC---CCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAA 79273 |||| |||||||||||||| || || ||| ||| ||||||||||| || Sbjct 1077375 ---ATTCAGCCCAATCCCAAAGATTTGATGGCGTAACTCCCCATAGATCATATTGAAGTT 1077431 Query 79274 TACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATT 79333 || || ||| |||||| ||||| ||||||| || ||| | || | || Sbjct 1077432 GTCCTTTGGAAGCAGGTGATCCATCATATGTCTCATAAGTACCATCCACAGCAGCAAGTT 1077491 Query 79334 CACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAG-ATCT 79392 | ||| ||||| ||||| | | ||| || ||||| || || | | ||||||| ||| Sbjct 1077492 CGCAAGATGCCTCCAATGCAGCATGATAGATTGTTTCAAAGATTTGCGTATTGAGCTTCT 1077551 Query 79393 TGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGA 79452 || |||||| | ||| || |||||| | | ||||| || || || | ||||| Sbjct 1077552 TG-GCTTCTGGTGAATCGAAAGGATAACGCATCAACATAAAAGCATCCGCCAGACCTTGT 1077610 Query 79453 ACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAA 79512 ||||||| ||| || || | ||| | ||| ||| |||||||| | ||||||| Sbjct 1077611 ACACCAAGACCAATGGGACGATGACGGCGATTTGAACGCTCAGCTTCCACGACAGGATAA 1077670 Query 79513 TAATTAATATCTATAATTTTATTGAGATTCCTG 79545 || || ||||| || || || ||||||||| || Sbjct 1077671 TAGTTGATATCAATGATCTTGTTGAGATTCTTG 1077703 >seq45 Length=1879501 Score = 174 bits (192), Expect = 2e-38 Identities = 304/441 (69%), Gaps = 6/441 (1%) Strand=Plus/Plus Query 49671 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 49730 |||||| ||| ||||| ||||||||||| || ||||| |||| | || || | || Sbjct 1418084 TTGGTAATCAGATACACGCTTTTCGAAAAAGTTGGTTTTGCCTTGAAGAGAGATCATGTC 1418143 Query 49731 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 49790 ||| || ||||| ||||||||| |||| ||| || || | ||||| | || ||| Sbjct 1418144 CATAAAGTCAAATGGATTGGTAGCATTGTAATGCTTGTTGAGACCCAAGGCGACAAGCAA 1418203 Query 49791 TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 49850 | ||| || |||||||| || ||| ||| | | |||||| || || || Sbjct 1418204 GCGATCGGCAACAAATTCAATGTATTGACACATGAGCTTGGCATTCATACCAATCAGGGA 1418263 Query 49851 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGA 49910 || |||||||| |||| | |||||||||||||| | || || || || ||| Sbjct 1418264 CACGGGAAGAGCATCAGTCAAGAATTCTTGTTCAATAGCAACAGCTTCAACAATGATA-- 1418321 Query 49911 TCTAACGGTTTCTTCACTCGGTGGATGCAAT---AAATGTTTAAACATCAAACATGCGAA 49967 | || | |||| | ||| ||| ||||| ||| | |||||| || || Sbjct 1418322 -CCAAGAATACGTTCATGGGATGGTTGCTTGCGCAAATGAGAAAAGAGCAAACAAGCAAA 1418380 Query 49968 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 50027 ||| ||| ||||| || || | ||| || || ||| ||| || | || ||||| Sbjct 1418381 ATCAGTGTGAAGACCTTCATCACGGGAAATGAGCTCATTGCTAAAAGTCAAGCCTGGCAT 1418440 Query 50028 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTC 50087 || ||||| || || |||||||| ||||| ||||| || |||||||||||||| ||||| Sbjct 1418441 AAGACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAAAAGAAGATGCCTTC 1418500 Query 50088 TACTGCGGCAAAGGCAACAAG 50108 ||| || ||||| |||||||| Sbjct 1418501 TACAGCAGCAAAAGCAACAAG 1418521 Score = 87.8 bits (96), Expect = 3e-12 Identities = 136/194 (70%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 50182 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 50241 ||||| || || | |||||| | ||||| | | ||| || | |||||| || ||| Sbjct 1418674 GTTTCAATCGCGTCAAAGAGCATTTCCTTTTCTTGAGAATCCTTGATATAAGTGTCAATC 1418733 Query 50242 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 50301 ||||||||||| | || || || ||||||||||| || || ||||| |||||||| Sbjct 1418734 AAAAGACTATAAGTCTCAGAGTGGATGTTTTCAATCATGATTTGGAATCCATAGAAACAC 1418793 Query 50302 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATT 50361 | || || | ||| || ||||| | || || || || | | ||| ||||| || || Sbjct 1418794 TTGGCTTCAGCAATTTGGACTTCGTTGCAGAAACGCTCCACAAGATTCTCATTGACGATA 1418853 Query 50362 CCGTC---ACTGGC 50372 || || |||||| Sbjct 1418854 CCATCCGAACTGGC 1418867 >seq1 Length=3088551 Score = 118 bits (130), Expect = 2e-21 Identities = 250/370 (68%), Gaps = 20/370 (5%) Strand=Plus/Minus Query 80115 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCC 80174 ||| || | ||| || || | |||||| |||| ||| |||||||||||||||||||| || Sbjct 749128 AGCAGTATCATTGTATACGCGCAACATGGGAACAATGCCATTGGATGTACCATTGGTACC 749069 Query 80175 GGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAG-----ACCTATTCCCCCT 80229 | ||||| ||| ||||||||| || ||| || ||| | || || Sbjct 749068 AGCAATATAAGAACCAGAGGCACGAATCTT-----TTGGAAGCTGCAACCAACACCACCA 749014 Query 80230 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCA 80289 || ||| || || || || | | |||||||| ||||| || ||||||||| Sbjct 749013 GCGGATTTGGATATGCGAGCACAAGTCATCAGGGTATCATAAATGCCTTCAATGCTATCA 748954 Query 80290 TCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 80349 || |||| | | ||| ||||||| || | |||| ||||| || || ||||| || Sbjct 748953 TCTCTCATTTGTACAAGATAACAGCTGGATAATTGGGGACGAGGTGTACCAGCATTGAAA 748894 Query 80350 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGC 80408 | || |||| ||||| ||||| |||| |||| ||| | || || || | ||| Sbjct 748893 AGAGTTGGAGTGGCGTGTGTAAAGTATTTGCAGGACATGTA-TTCATATGTTTCCAAAGC 748835 Query 80409 TGATTCTATATC----CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAG 80464 || || ||||| |||| |||| || | || |||||||| | |||||| |||| Sbjct 748834 TGCATCAATATCTTCACCATGGATG----CCAAGAGCAACACGCATAATCATGTGTTGAG 748779 Query 80465 GTCTTTCAAC 80474 | | |||||| Sbjct 748778 GACGTTCAAC 748769 >seq2 Length=1153633 Score = 98.7 bits (108), Expect = 1e-15 Identities = 224/335 (67%), Gaps = 9/335 (3%) Strand=Plus/Minus Query 50182 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 50241 ||||| || |||| |||||| | |||||| | | ||| || | |||||| || ||| Sbjct 770272 GTTTCAATAGCATCAAAGAGCATTTCTTTTTCTTGAGGATCCTTGATATAAGTGTCAATC 770213 Query 50242 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 50301 |||||||| || | || || |||||||||||||| ||||| ||||| ||||| || Sbjct 770212 AAAAGACTGTAAGTCTCAGAGTGAATGTTTTCAATCATGATCTGGAATCCATAGAAGCAC 770153 Query 50302 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATT 50361 | || || | ||| || ||||| | || || || || | | ||| ||||| || || Sbjct 770152 TTGGCTTCAGCAATTTGGACTTCGTTGCAGAAACGCTCTACAAGATTCTCATTGACGATA 770093 Query 50362 CCGTC---ACTGGCTGCAAAAAACGCCAATACATGTTTTATA---AAATGTTTTTCGTTG 50415 || || |||| ||||| || || | ||| | ||| ||| ||| || ||| Sbjct 770092 CCATCCGAACTG---GCAAAGAAAGCAAGCACACGAGAGATAAAGAAACGTTCATCCTTG 770036 Query 50416 GGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAA 50475 | | || | ||| || || || || || | ||| | || || ||||||| Sbjct 770035 GTCATCTTGTTCTCCCAGTCGTTTTGGTCCTTGGAAAGATCAATCTCCTCTGCTGTCCAG 769976 Query 50476 AATGATGCCTCTGCCTTTTTATACATATTCCAGAT 50510 || || || ||||| ||||| || | | |||||| Sbjct 769975 AAAGAAGCTTCTGCTTTTTTGTAAAACTGCCAGAT 769941 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 49950 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009 ||||| | |||||| |||||| || | || || || | ||| || ||||| Sbjct 770566 AAACAAGAGACATGCAAAATCGGTATGTAATCCTTCATCACGTGAAATAAGCTCGTTACT 770507 Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069 || || || || ||||| | ||||||||||| |||||||| || || ||||| || || Sbjct 770506 GAATGTAAGACCTGGCATCAATCCACGCTTTTTGAGCCAAAAGATAGAAGCAAAAGAACC 770447 Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 |||||||||||| ||||| ||||| || || ||||| || Sbjct 770446 AGAAAAGAAGATGCCTTCCACTGCAGCGAATGCAACTAG 770408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268135601360