Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-19 >seq2 Length=1153633 Score = 111 bits (122), Expect = 2e-19 Identities = 297/454 (65%), Gaps = 0/454 (0%) Strand=Plus/Minus Query 13583 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13642 |||||| || |||| || ||||||||||| || || || | || || || | || Sbjct 770845 TTGATAATCTGACACTCGCTTCTCAAAGAAGTTGGTCTTGCCCTGAAGAGAAATCATGTC 770786 Query 13643 CATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAA 13702 |||||| ||||| ||||| |||| | | || || || || | | | | Sbjct 770785 CATAAAGTCAAAGGGATTGGTTGAATGATAATGCTTGTCTACGCCAAGAGCCACCAAAAG 770726 Query 13703 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13762 | ||| || | ||| ||||| || ||| |||| | | ||||||||| || | Sbjct 770725 ACGATCCGCCACAAATTCAATGTACTGACACATGAGCTTGGCATTCATACCAATCAAAGA 770666 Query 13763 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAAT 13822 ||||| | || ||||| ||||||| || ||| ||||| || | || ||| Sbjct 770665 AACAGGTAAAGCATCTGTTAAGAATTCTTGCTCGATATTAACAGCTTCAATAATGATATC 770606 Query 13823 TGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATC 13882 ||| | || ||| || ||| ||||| ||| | | ||| |||||||| Sbjct 770605 ACGGATACGTTGATGAGATGGCTGATGACGAAGATGAGAAAACAAGAGACATGCAAAATC 770546 Query 13883 ACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAA 13942 ||| | || ||||| | |||||| ||||| ||||| | ||||||||||| Sbjct 770545 GGTATGTAATCCTTCATCACGTGAAATAAGCTCGTTACTGAATGTAAGACCTGGCATCAA 770486 Query 13943 TCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAAC 14002 ||| || ||||| | |||||| || | |||||| || || |||||||| || || || || Sbjct 770485 TCCACGCTTTTTGAGCCAAAAGATAGAAGCAAAAGAACCAGAAAAGAAGATGCCTTCCAC 770426 Query 14003 TGCAGCAAACGCTATTAATCGTTCTCCAAACGAT 14036 |||||| || || | || ||||| |||| ||| Sbjct 770425 TGCAGCGAATGCAACTAGACGTTCAGCAAAAGAT 770392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727556251600